RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 HYPKQ9NX55 129 aa7.9□□□□□ -1.15
CLCN3-211ENST00000613795 RAPGEF6Q8TEU7 1601 aa7.9□□□□□ -1.15
CLCN3-211ENST00000613795 MPHOSPH10O00566 681 aaKnown RBP7.9□□□□□ -1.15
CLCN3-211ENST00000613795 INPP5BP32019 993 aa7.9□□□□□ -1.15
CLCN3-211ENST00000613795 AP1ARQ63HQ0 302 aa7.9□□□□□ -1.15
CLCN3-211ENST00000613795 MAATS1Q7Z4T9 603 aa7.9□□□□□ -1.15
CLCN3-211ENST00000613795 BICRAQ9NZM4 1560 aa7.9□□□□□ -1.15
CLCN3-211ENST00000613795 ZSCAN22P10073 491 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-211ENST00000613795 SH3BGRP55822 239 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-211ENST00000613795 NUTM2GQ5VZR2 741 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 DAAM2Q86T65 1068 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 AACSQ86V21 672 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 SKAP1Q86WV1 359 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 GTF3C6Q969F1 213 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 UBAC1Q9BSL1 405 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 EHMT1Q9H9B1 1298 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.152e-6■■■■■ 41.9
CLCN3-211ENST00000613795 U3KPZ7 1027 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-211ENST00000613795 TAF7Q15545 349 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-211ENST00000613795 ZFYVE27Q5T4F4 411 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 TBC1D9Q6ZT07 1266 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 BCCIPQ9P287 314 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLCN3-211ENST00000613795 RPRD2Q5VT52 1461 aaKnown RBP7.89□□□□□ -1.15
CLCN3-211ENST00000613795 A0A087WZG4 1122 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 TNIP1Q15025 636 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 TMEM57Q8N5G2 664 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 TAOK3Q9H2K8 898 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 SPECC1Q5M775 1068 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 SCLT1Q96NL6 688 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 TMOD2Q9NZR1 351 aa7.89□□□□□ -1.15
CLCN3-211ENST00000613795 HDAC1Q13547 482 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC6Q16204 474 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 FAM114A1Q8IWE2 563 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 LMNTD2Q8IXW0 634 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 KRI1Q8N9T8 703 aaKnown RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 ATRIPQ8WXE1 791 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 CEP63Q96MT8 703 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 MRVI1Q9Y6F6 885 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 FGFR1OPO95684 399 aaKnown RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 FKBP15Q5T1M5 1219 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 GIMAP6Q6P9H5 292 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC113Q9H0I3 377 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 STMN4Q9H169 189 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 GOLIM4O00461 696 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 ANO6Q4KMQ2 910 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 RPAINQ86UA6 219 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 NUTM1Q86Y26 1132 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 RNF41Q9H4P4 317 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 BCL2L12Q9HB09 334 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 STRN4Q9NRL3 753 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 KIF21AQ7Z4S6 1674 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 TTC21AQ8NDW8 1320 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 CTAGE9A4FU28 777 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 SRGAP3O43295 1099 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 ZSCAN26Q16670 478 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 DUSP27Q5VZP5 1158 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 TSR2Q969E8 191 aaKnown RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 IFIT1P09914 478 aaKnown RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 CAVIN4Q5BKX8 364 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 USP48Q86UV5 1035 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 NUP88Q99567 741 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 TANGO6Q9C0B7 1094 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-211ENST00000613795 FANCAO15360 1455 aa7.88□□□□□ -1.15
CLCN3-211ENST00000613795 KIF3CO14782 793 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 PTGS1P23219 599 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 ANAPC15P60006 121 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC178Q5BJE1 867 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 FERMT3Q86UX7 667 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 FSIP1Q8NA03 581 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 FBF1Q8TES7 1133 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 RBSNQ9H1K0 784 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 POTEJP0CG39 1038 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 RNF168Q8IYW5 571 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 STAMBPO95630 424 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 LACTBP83111 547 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 HLTFQ14527 1009 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 SPATS2Q86XZ4 545 aaKnown RBP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 IGHDP01880 384 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 GOLGA5Q8TBA6 731 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 TMOD3Q9NYL9 352 aa7.87□□□□□ -1.15
CLCN3-211ENST00000613795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 SOS1Q07889 1333 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-211ENST00000613795 CTTNBP2Q8WZ74 1663 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 WASLO00401 505 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-211ENST00000613795 NEBLO76041 1014 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 ATP2B1P20020 1258 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 GJB2P29033 226 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 SUDS3Q9H7L9 328 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-211ENST00000613795 GDPD2Q9HCC8 539 aa7.86□□□□□ -1.15
CLCN3-211ENST00000613795 ZFYP08048 801 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-211ENST00000613795 DDX46Q7L014 1031 aaKnown RBP7.86□□□□□ -1.15
CLCN3-211ENST00000613795 DDX12PQ92771 950 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms