RNA–Protein interactions for RNA: ENST00000610434.4

PSMB3-207, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-207ENST00000610434 RIPK4P57078 832 aa14.39□□□□□ -0.11
PSMB3-207ENST00000610434 ZNF34Q8IZ26 560 aa14.39□□□□□ -0.11
PSMB3-207ENST00000610434 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
PSMB3-207ENST00000610434 PSMD1Q99460 953 aa14.39□□□□□ -0.11
PSMB3-207ENST00000610434 NUP98P52948 1817 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 TMEM88BA6NKF7 163 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 ANXA1P04083 346 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 HOXA10P31260 410 aaPredicted RBP14.38□□□□□ -0.11
PSMB3-207ENST00000610434 EIF6P56537 245 aaKnown RBP14.38□□□□□ -0.11
PSMB3-207ENST00000610434 MAP1SQ66K74 1059 aaPredicted RBP14.38□□□□□ -0.11
PSMB3-207ENST00000610434 CC2D2BQ6DHV5 1058 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
PSMB3-207ENST00000610434 C3orf67Q6ZVT6 689 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 SLC51AQ86UW1 340 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 GPC2Q8N158 579 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 NECTIN2Q92692 538 aa14.38□□□□□ -0.11
PSMB3-207ENST00000610434 SCN4AP35499 1836 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 NTSR2O95665 410 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 PNMA8AQ86V59 439 aaPredicted RBP14.37□□□□□ -0.11
PSMB3-207ENST00000610434 CNTROBQ8N137 903 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 LARGE2Q8N3Y3 721 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 CRAMP1Q96RY5 1269 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 KDM3BQ7LBC6 1761 aa14.37□□□□□ -0.11
PSMB3-207ENST00000610434 PPEF1O14829 653 aaPredicted RBP14.36□□□□□ -0.11
PSMB3-207ENST00000610434 VEGFBP49765 207 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 PDIA6Q15084 440 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 NEUROD2Q15784 382 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 PROSER3Q2NL68 480 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 UTP14AQ9BVJ6 771 aaKnown RBP14.36□□□□□ -0.11
PSMB3-207ENST00000610434 LAMB4A4D0S4 1761 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
PSMB3-207ENST00000610434 CNTNAP1P78357 1384 aa14.35□□□□□ -0.11
PSMB3-207ENST00000610434 LMOD1P29536 600 aaPredicted RBP14.35□□□□□ -0.11
PSMB3-207ENST00000610434 AIMP1Q12904 312 aaKnown RBP14.35□□□□□ -0.11
PSMB3-207ENST00000610434 PARP10Q53GL7 1025 aa14.35□□□□□ -0.11
PSMB3-207ENST00000610434 TMX4Q9H1E5 349 aaPredicted RBP14.35□□□□□ -0.11
PSMB3-207ENST00000610434 FOXN1O15353 648 aa14.34□□□□□ -0.11
PSMB3-207ENST00000610434 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
PSMB3-207ENST00000610434 EPS15P42566 896 aa14.34□□□□□ -0.11
PSMB3-207ENST00000610434 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
PSMB3-207ENST00000610434 COPS6Q7L5N1 327 aa14.34□□□□□ -0.11
PSMB3-207ENST00000610434 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
PSMB3-207ENST00000610434 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
PSMB3-207ENST00000610434 IBTKQ9P2D0 1353 aaPredicted RBP14.34□□□□□ -0.11
PSMB3-207ENST00000610434 SNED1Q8TER0 1413 aa14.33□□□□□ -0.11
PSMB3-207ENST00000610434 PPIP5K2O43314 1243 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 RALBP1Q15311 655 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 SLC10A5Q5PT55 438 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 NIM1KQ8IY84 436 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 XAGE3Q8WTP9 111 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
PSMB3-207ENST00000610434 COL4A5P29400 1685 aa14.33□□□□□ -0.12
PSMB3-207ENST00000610434 HCLS1P14317 486 aaPredicted RBP14.32□□□□□ -0.12
PSMB3-207ENST00000610434 LMOD3Q0VAK6 560 aa14.32□□□□□ -0.12
PSMB3-207ENST00000610434 AOC3Q16853 763 aa14.32□□□□□ -0.12
PSMB3-207ENST00000610434 DEFB115Q30KQ5 88 aa14.32□□□□□ -0.12
PSMB3-207ENST00000610434 ABT1Q9ULW3 272 aaKnown RBP14.32□□□□□ -0.12
PSMB3-207ENST00000610434 ATP6V0A2Q9Y487 856 aa14.32□□□□□ -0.12
PSMB3-207ENST00000610434 SCNN1DP51172 638 aa14.31□□□□□ -0.12
PSMB3-207ENST00000610434 FMR1Q06787 632 aaKnown RBP eCLIP14.31□□□□□ -0.12
PSMB3-207ENST00000610434 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
PSMB3-207ENST00000610434 KRT24Q2M2I5 525 aa14.31□□□□□ -0.12
PSMB3-207ENST00000610434 BABAM1Q9NWV8 329 aa14.31□□□□□ -0.12
PSMB3-207ENST00000610434 RIC1Q4ADV7 1423 aa14.31□□□□□ -0.12
PSMB3-207ENST00000610434 HSP90AB3PQ58FF7 597 aa14.3□□□□□ -0.12
PSMB3-207ENST00000610434 NLRP10Q86W26 655 aa14.3□□□□□ -0.12
PSMB3-207ENST00000610434 DDX21Q9NR30 783 aaKnown RBP eCLIP14.3□□□□□ -0.12
PSMB3-207ENST00000610434 TRMT112Q9UI30 125 aaKnown RBP14.3□□□□□ -0.12
PSMB3-207ENST00000610434 ABCC4O15439 1325 aa14.3□□□□□ -0.12
PSMB3-207ENST00000610434 RASSF10A6NK89 507 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 CHL1O00533 1208 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 BBOX1O75936 387 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 CTCFP49711 727 aaPredicted RBP14.29□□□□□ -0.12
PSMB3-207ENST00000610434 TCIRG1Q13488 830 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 DPP8Q6V1X1 898 aaPredicted RBP14.29□□□□□ -0.12
PSMB3-207ENST00000610434 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
PSMB3-207ENST00000610434 DDX46Q7L014 1031 aaKnown RBP14.29□□□□□ -0.12
PSMB3-207ENST00000610434 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 MPNDQ8N594 471 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
PSMB3-207ENST00000610434 TRAF5O00463 557 aa14.28□□□□□ -0.12
PSMB3-207ENST00000610434 LBX1P52954 281 aa14.28□□□□□ -0.12
PSMB3-207ENST00000610434 CXCL9Q07325 125 aa14.28□□□□□ -0.12
PSMB3-207ENST00000610434 GRM1Q13255 1194 aa14.28□□□□□ -0.12
PSMB3-207ENST00000610434 USP50Q70EL3 339 aaPredicted RBP14.28□□□□□ -0.12
PSMB3-207ENST00000610434 SUPT20HQ8NEM7 779 aa14.28□□□□□ -0.12
PSMB3-207ENST00000610434 WDR33Q9C0J8 1336 aaKnown RBP14.28□□□□□ -0.12
PSMB3-207ENST00000610434 ZNRF3Q9ULT6 936 aa14.28□□□□□ -0.12
PSMB3-207ENST00000610434 ADAMTSL1Q8N6G6 1762 aa14.27□□□□□ -0.12
PSMB3-207ENST00000610434 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.12
PSMB3-207ENST00000610434 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
PSMB3-207ENST00000610434 RTFDC1Q9BY42 306 aaPredicted RBP14.27□□□□□ -0.13
PSMB3-207ENST00000610434 VPS33BQ9H267 617 aa14.27□□□□□ -0.13
PSMB3-207ENST00000610434 PRDM10Q9NQV6 1147 aa14.27□□□□□ -0.13
PSMB3-207ENST00000610434 GPRC5DQ9NZD1 345 aa14.27□□□□□ -0.13
PSMB3-207ENST00000610434 CHPF2Q9P2E5 772 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms