RNA–Protein interactions for RNA: ENST00000607866.1

ITM2B-204, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-204ENST00000607866 FLAD1Q8NFF5 587 aa8.22□□□□□ -1.09
ITM2B-204ENST00000607866 NLGN2Q8NFZ4 835 aa8.22□□□□□ -1.09
ITM2B-204ENST00000607866 ADAMTS19Q8TE59 1207 aa8.22□□□□□ -1.09
ITM2B-204ENST00000607866 SPG7Q9UQ90 795 aa8.22□□□□□ -1.09
ITM2B-204ENST00000607866 C4BP0C0L5 1744 aa8.21□□□□□ -1.09
ITM2B-204ENST00000607866 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
ITM2B-204ENST00000607866 USP17L8P0C7I0 530 aa8.21□□□□□ -1.1
ITM2B-204ENST00000607866 GJA5P36382 358 aa8.21□□□□□ -1.1
ITM2B-204ENST00000607866 MFAP1P55081 439 aaKnown RBP8.21□□□□□ -1.1
ITM2B-204ENST00000607866 PIGBQ92521 554 aa8.21□□□□□ -1.1
ITM2B-204ENST00000607866 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.1
ITM2B-204ENST00000607866 POLKQ9UBT6 870 aa8.21□□□□□ -1.1
ITM2B-204ENST00000607866 UBR3Q6ZT12 1888 aa8.2□□□□□ -1.1
ITM2B-204ENST00000607866 COL9A1P20849 921 aa8.2□□□□□ -1.1
ITM2B-204ENST00000607866 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
ITM2B-204ENST00000607866 PCGF6Q9BYE7 350 aa8.2□□□□□ -1.1
ITM2B-204ENST00000607866 PRM3Q9NNZ6 103 aa8.2□□□□□ -1.1
ITM2B-204ENST00000607866 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 GRIN3BO60391 1043 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 GPR37L1O60883 481 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 NUDT7P0C024 238 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 PHKG2P15735 406 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 SIK1P57059 783 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 EIF4G2P78344 907 aaKnown RBP eCLIP8.19□□□□□ -1.1
ITM2B-204ENST00000607866 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
ITM2B-204ENST00000607866 HDGFL1Q5TGJ6 251 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 POLR3GLQ9BT43 218 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 TMOD3Q9NYL9 352 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 CD2APQ9Y5K6 639 aa8.19□□□□□ -1.1
ITM2B-204ENST00000607866 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.13e-7■■□□□ 12.4
ITM2B-204ENST00000607866 SSFA2P28290 1259 aa8.18□□□□□ -1.1
ITM2B-204ENST00000607866 TNNT2P45379 298 aaPredicted RBP8.18□□□□□ -1.1
ITM2B-204ENST00000607866 NUDT18Q6ZVK8 323 aa8.18□□□□□ -1.1
ITM2B-204ENST00000607866 AMIGO3Q86WK7 504 aa8.18□□□□□ -1.1
ITM2B-204ENST00000607866 SULF1Q8IWU6 871 aa8.18□□□□□ -1.1
ITM2B-204ENST00000607866 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
ITM2B-204ENST00000607866 IGSF1Q8N6C5 1336 aa8.18□□□□□ -1.1
ITM2B-204ENST00000607866 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
ITM2B-204ENST00000607866 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
ITM2B-204ENST00000607866 RFX1P22670 979 aa8.17□□□□□ -1.1
ITM2B-204ENST00000607866 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
ITM2B-204ENST00000607866 LINC00116Q8NCU8 138 aa8.17□□□□□ -1.1
ITM2B-204ENST00000607866 FOXD4L4Q8WXT5 416 aaPredicted RBP8.17□□□□□ -1.1
ITM2B-204ENST00000607866 PANK3Q9H999 370 aa8.17□□□□□ -1.1
ITM2B-204ENST00000607866 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
ITM2B-204ENST00000607866 ASAP1Q9ULH1 1129 aa8.17□□□□□ -1.1
ITM2B-204ENST00000607866 ERVV-2B6SEH9 535 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 HSP90AB1P08238 724 aaKnown RBP8.16□□□□□ -1.1
ITM2B-204ENST00000607866 DNAJB2P25686 324 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 ATP6V1AP38606 617 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 C1QTNF8P60827 252 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 ITPK1Q13572 414 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 ARSIQ5FYB1 569 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 ZNF831Q5JPB2 1677 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 PRPF38BQ5VTL8 546 aaKnown RBP8.16□□□□□ -1.1
ITM2B-204ENST00000607866 ZNF428Q96B54 188 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 DCAF5Q96JK2 942 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
ITM2B-204ENST00000607866 ATG3Q9NT62 314 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 NDUFB9Q9Y6M9 179 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 PCNTO95613 3336 aa8.16□□□□□ -1.1
ITM2B-204ENST00000607866 KDRP35968 1356 aa8.15□□□□□ -1.1
ITM2B-204ENST00000607866 CARNS1A5YM72 827 aa8.15□□□□□ -1.1
ITM2B-204ENST00000607866 GIGYF1O75420 1035 aaPredicted RBP8.15□□□□□ -1.1
ITM2B-204ENST00000607866 PDE4CQ08493 712 aa8.15□□□□□ -1.1
ITM2B-204ENST00000607866 AMOTQ4VCS5 1084 aa8.15□□□□□ -1.1
ITM2B-204ENST00000607866 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
ITM2B-204ENST00000607866 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
ITM2B-204ENST00000607866 PLEKHO1Q53GL0 409 aaPredicted RBP8.14□□□□□ -1.11
ITM2B-204ENST00000607866 SMIM5Q71RC9 77 aa8.14□□□□□ -1.11
ITM2B-204ENST00000607866 MORC1Q86VD1 984 aa8.14□□□□□ -1.11
ITM2B-204ENST00000607866 COL5A3P25940 1745 aaPredicted RBP8.14□□□□□ -1.11
ITM2B-204ENST00000607866 KDM6AO15550 1401 aaPredicted RBP8.13□□□□□ -1.11
ITM2B-204ENST00000607866 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 KDM4AO75164 1064 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 BRD1O95696 1058 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
ITM2B-204ENST00000607866 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
ITM2B-204ENST00000607866 CCER1Q8TC90 406 aaPredicted RBP8.13□□□□□ -1.11
ITM2B-204ENST00000607866 TATDN2Q93075 761 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 PPP1R12CQ9BZL4 782 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 ZBTB3Q9H5J0 574 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 PNMA3Q9UL41 463 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
ITM2B-204ENST00000607866 KNSTRNQ9Y448 316 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
ITM2B-204ENST00000607866 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
ITM2B-204ENST00000607866 ADCY9O60503 1353 aa8.12□□□□□ -1.11
ITM2B-204ENST00000607866 CNTNAP4Q9C0A0 1308 aa8.12□□□□□ -1.11
ITM2B-204ENST00000607866 MYH14Q7Z406 1995 aaKnown RBP8.12□□□□□ -1.11
ITM2B-204ENST00000607866 MMP10P09238 476 aa8.12□□□□□ -1.11
ITM2B-204ENST00000607866 HOXB3P14651 431 aaPredicted RBP8.12□□□□□ -1.11
ITM2B-204ENST00000607866 MTHFSP49914 203 aa8.12□□□□□ -1.11
ITM2B-204ENST00000607866 CABP4P57796 275 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms