RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SUSD4Q5VX71 490 aa19.54■□□□□ 0.72
CTSA-216ENST00000607212 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
CTSA-216ENST00000607212 RIPK4P57078 832 aa19.53■□□□□ 0.72
CTSA-216ENST00000607212 CC2D2BQ6DHV5 1058 aa19.53■□□□□ 0.72
CTSA-216ENST00000607212 UBN2Q6ZU65 1347 aa19.52■□□□□ 0.72
CTSA-216ENST00000607212 PPEF1O14829 653 aaPredicted RBP19.52■□□□□ 0.72
CTSA-216ENST00000607212 LMOD1P29536 600 aaPredicted RBP19.52■□□□□ 0.72
CTSA-216ENST00000607212 LARGE2Q8N3Y3 721 aa19.52■□□□□ 0.72
CTSA-216ENST00000607212 TMEM88BA6NKF7 163 aa19.51■□□□□ 0.71
CTSA-216ENST00000607212 CRY2Q49AN0 593 aa19.51■□□□□ 0.71
CTSA-216ENST00000607212 PNMA8AQ86V59 439 aaPredicted RBP19.51■□□□□ 0.71
CTSA-216ENST00000607212 NECTIN2Q92692 538 aa19.51■□□□□ 0.71
CTSA-216ENST00000607212 PSMD1Q99460 953 aa19.51■□□□□ 0.71
CTSA-216ENST00000607212 ERBB4Q15303 1308 aa19.51■□□□□ 0.71
CTSA-216ENST00000607212 IBTKQ9P2D0 1353 aaPredicted RBP19.5■□□□□ 0.71
CTSA-216ENST00000607212 FZD9O00144 591 aa19.5■□□□□ 0.71
CTSA-216ENST00000607212 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
CTSA-216ENST00000607212 PARP10Q53GL7 1025 aa19.5■□□□□ 0.71
CTSA-216ENST00000607212 GIGYF2Q6Y7W6 1299 aaKnown RBP19.5■□□□□ 0.71
CTSA-216ENST00000607212 GPC2Q8N158 579 aa19.5■□□□□ 0.71
CTSA-216ENST00000607212 AIDAQ96BJ3 306 aa19.5■□□□□ 0.71
CTSA-216ENST00000607212 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
CTSA-216ENST00000607212 NTSR2O95665 410 aa19.49■□□□□ 0.71
CTSA-216ENST00000607212 ANXA1P04083 346 aa19.49■□□□□ 0.71
CTSA-216ENST00000607212 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
CTSA-216ENST00000607212 NEUROD2Q15784 382 aa19.49■□□□□ 0.71
CTSA-216ENST00000607212 MAP1SQ66K74 1059 aaPredicted RBP19.49■□□□□ 0.71
CTSA-216ENST00000607212 ZNF34Q8IZ26 560 aa19.49■□□□□ 0.71
CTSA-216ENST00000607212 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
CTSA-216ENST00000607212 LAS1LQ9Y4W2 734 aaKnown RBP19.49■□□□□ 0.71
CTSA-216ENST00000607212 PASKQ96RG2 1323 aa19.49■□□□□ 0.71
CTSA-216ENST00000607212 CNTNAP1P78357 1384 aa19.48■□□□□ 0.71
CTSA-216ENST00000607212 NIM1KQ8IY84 436 aa19.48■□□□□ 0.71
CTSA-216ENST00000607212 HOXA10P31260 410 aaPredicted RBP19.47■□□□□ 0.71
CTSA-216ENST00000607212 RALBP1Q15311 655 aa19.47■□□□□ 0.71
CTSA-216ENST00000607212 GRIPAP1Q4V328 841 aa19.47■□□□□ 0.71
CTSA-216ENST00000607212 CNTROBQ8N137 903 aa19.47■□□□□ 0.71
CTSA-216ENST00000607212 CRAMP1Q96RY5 1269 aa19.47■□□□□ 0.71
CTSA-216ENST00000607212 ABT1Q9ULW3 272 aaKnown RBP19.47■□□□□ 0.71
CTSA-216ENST00000607212 RIC1Q4ADV7 1423 aa19.46■□□□□ 0.71
CTSA-216ENST00000607212 PPIP5K2O43314 1243 aa19.46■□□□□ 0.71
CTSA-216ENST00000607212 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
CTSA-216ENST00000607212 ITGBL1O95965 494 aaPredicted RBP19.45■□□□□ 0.7
CTSA-216ENST00000607212 TMPOP42166 694 aaKnown RBP19.45■□□□□ 0.7
CTSA-216ENST00000607212 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
CTSA-216ENST00000607212 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
CTSA-216ENST00000607212 PAXIP1Q6ZW49 1069 aaPredicted RBP19.45■□□□□ 0.7
CTSA-216ENST00000607212 VEGFBP49765 207 aa19.44■□□□□ 0.7
CTSA-216ENST00000607212 PROSER3Q2NL68 480 aa19.44■□□□□ 0.7
CTSA-216ENST00000607212 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
CTSA-216ENST00000607212 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
CTSA-216ENST00000607212 AOC3Q16853 763 aa19.43■□□□□ 0.7
CTSA-216ENST00000607212 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
CTSA-216ENST00000607212 SLC51AQ86UW1 340 aa19.43■□□□□ 0.7
CTSA-216ENST00000607212 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
CTSA-216ENST00000607212 ADAMTSL1Q8N6G6 1762 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 FOXN1O15353 648 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 PDIA6Q15084 440 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 DEFB115Q30KQ5 88 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 SUPT20HQ8NEM7 779 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 ZNF428Q96B54 188 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 TRMT112Q9UI30 125 aaKnown RBP19.42■□□□□ 0.7
CTSA-216ENST00000607212 ABCC4O15439 1325 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 COL4A5P29400 1685 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 SNED1Q8TER0 1413 aa19.42■□□□□ 0.7
CTSA-216ENST00000607212 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
CTSA-216ENST00000607212 EPS15P42566 896 aa19.41■□□□□ 0.7
CTSA-216ENST00000607212 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
CTSA-216ENST00000607212 GRM1Q13255 1194 aa19.41■□□□□ 0.7
CTSA-216ENST00000607212 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
CTSA-216ENST00000607212 DDX46Q7L014 1031 aaKnown RBP19.41■□□□□ 0.7
CTSA-216ENST00000607212 ATP6V0A2Q9Y487 856 aa19.41■□□□□ 0.7
CTSA-216ENST00000607212 LAMB2P55268 1798 aa19.4■□□□□ 0.7
CTSA-216ENST00000607212 MYBBP1AQ9BQG0 1328 aaKnown RBP19.4■□□□□ 0.7
CTSA-216ENST00000607212 CTCFP49711 727 aaPredicted RBP19.39■□□□□ 0.69
CTSA-216ENST00000607212 NLRP10Q86W26 655 aa19.39■□□□□ 0.69
CTSA-216ENST00000607212 MPNDQ8N594 471 aa19.39■□□□□ 0.69
CTSA-216ENST00000607212 SH3TC1Q8TE82 1336 aa19.39■□□□□ 0.69
CTSA-216ENST00000607212 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
CTSA-216ENST00000607212 SCNN1DP51172 638 aa19.38■□□□□ 0.69
CTSA-216ENST00000607212 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
CTSA-216ENST00000607212 SLC10A5Q5PT55 438 aa19.38■□□□□ 0.69
CTSA-216ENST00000607212 USP50Q70EL3 339 aaPredicted RBP19.38■□□□□ 0.69
CTSA-216ENST00000607212 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
CTSA-216ENST00000607212 BCL2L13Q9BXK5 485 aa19.38■□□□□ 0.69
CTSA-216ENST00000607212 DDX21Q9NR30 783 aaKnown RBP eCLIP19.38■□□□□ 0.69
CTSA-216ENST00000607212 BBOX1O75936 387 aa19.37■□□□□ 0.69
CTSA-216ENST00000607212 TCIRG1Q13488 830 aa19.37■□□□□ 0.69
CTSA-216ENST00000607212 HDGFL1Q5TGJ6 251 aa19.37■□□□□ 0.69
CTSA-216ENST00000607212 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
CTSA-216ENST00000607212 CHPF2Q9P2E5 772 aa19.37■□□□□ 0.69
CTSA-216ENST00000607212 ZNRF3Q9ULT6 936 aa19.37■□□□□ 0.69
CTSA-216ENST00000607212 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
CTSA-216ENST00000607212 RASSF10A6NK89 507 aa19.36■□□□□ 0.69
CTSA-216ENST00000607212 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
CTSA-216ENST00000607212 TRPM7Q96QT4 1865 aa19.36■□□□□ 0.69
CTSA-216ENST00000607212 TAF1P21675 1872 aa19.35■□□□□ 0.69
CTSA-216ENST00000607212 GRAPQ13588 217 aa19.35■□□□□ 0.69
CTSA-216ENST00000607212 CIAPIN1Q6FI81 312 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms