RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 CAPNS2Q96L46 248 aa20.01■□□□□ 0.79
SSBP4-214ENST00000607020 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
SSBP4-214ENST00000607020 EPS15P42566 896 aa20■□□□□ 0.79
SSBP4-214ENST00000607020 TAF7Q15545 349 aaPredicted RBP20■□□□□ 0.79
SSBP4-214ENST00000607020 CST9Q5W186 159 aa20■□□□□ 0.79
SSBP4-214ENST00000607020 GPR101Q96P66 508 aaPredicted RBP20■□□□□ 0.79
SSBP4-214ENST00000607020 GJA3Q9Y6H8 435 aa20■□□□□ 0.79
SSBP4-214ENST00000607020 MAP2K2P36507 400 aa19.99■□□□□ 0.79
SSBP4-214ENST00000607020 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
SSBP4-214ENST00000607020 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
SSBP4-214ENST00000607020 BEGAINQ9BUH8 593 aa19.99■□□□□ 0.79
SSBP4-214ENST00000607020 VPS33BQ9H267 617 aa19.99■□□□□ 0.79
SSBP4-214ENST00000607020 LARGE2Q8N3Y3 721 aa19.98■□□□□ 0.79
SSBP4-214ENST00000607020 TLL2Q9Y6L7 1015 aa19.98■□□□□ 0.79
SSBP4-214ENST00000607020 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
SSBP4-214ENST00000607020 ABCC12Q96J65 1359 aa19.97■□□□□ 0.79
SSBP4-214ENST00000607020 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
SSBP4-214ENST00000607020 NUTM1Q86Y26 1132 aa19.97■□□□□ 0.79
SSBP4-214ENST00000607020 MAP3K15Q6ZN16 1313 aa19.97■□□□□ 0.79
SSBP4-214ENST00000607020 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
SSBP4-214ENST00000607020 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
SSBP4-214ENST00000607020 FMR1Q06787 632 aaKnown RBP eCLIP19.96■□□□□ 0.79
SSBP4-214ENST00000607020 DCTN1Q14203 1278 aa19.96■□□□□ 0.79
SSBP4-214ENST00000607020 CYP4F22Q6NT55 531 aa19.96■□□□□ 0.79
SSBP4-214ENST00000607020 RPGRQ92834 1020 aaKnown RBP19.96■□□□□ 0.79
SSBP4-214ENST00000607020 RBM17Q96I25 401 aaKnown RBP19.95■□□□□ 0.78
SSBP4-214ENST00000607020 HHIPL1Q96JK4 782 aa19.95■□□□□ 0.78
SSBP4-214ENST00000607020 COL4A5P29400 1685 aa19.94■□□□□ 0.78
SSBP4-214ENST00000607020 CA12O43570 354 aa19.94■□□□□ 0.78
SSBP4-214ENST00000607020 MLLT1Q03111 559 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-214ENST00000607020 ZNF34Q8IZ26 560 aa19.94■□□□□ 0.78
SSBP4-214ENST00000607020 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
SSBP4-214ENST00000607020 ADARB2Q9NS39 739 aaKnown RBP19.94■□□□□ 0.78
SSBP4-214ENST00000607020 PGAP2Q9UHJ9 254 aa19.94■□□□□ 0.78
SSBP4-214ENST00000607020 TRAF5O00463 557 aa19.93■□□□□ 0.78
SSBP4-214ENST00000607020 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-214ENST00000607020 SUSD4Q5VX71 490 aa19.93■□□□□ 0.78
SSBP4-214ENST00000607020 NIM1KQ8IY84 436 aa19.93■□□□□ 0.78
SSBP4-214ENST00000607020 GPRC5DQ9NZD1 345 aa19.93■□□□□ 0.78
SSBP4-214ENST00000607020 CCDC85CA6NKD9 419 aa19.92■□□□□ 0.78
SSBP4-214ENST00000607020 PPEF1O14829 653 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-214ENST00000607020 TTLL7Q6ZT98 887 aa19.92■□□□□ 0.78
SSBP4-214ENST00000607020 PAXIP1Q6ZW49 1069 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-214ENST00000607020 SAPCD2Q86UD0 394 aa19.92■□□□□ 0.78
SSBP4-214ENST00000607020 MIS18AQ9NYP9 233 aa19.92■□□□□ 0.78
SSBP4-214ENST00000607020 UBN2Q6ZU65 1347 aa19.92■□□□□ 0.78
SSBP4-214ENST00000607020 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
SSBP4-214ENST00000607020 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
SSBP4-214ENST00000607020 RTFDC1Q9BY42 306 aaPredicted RBP19.91■□□□□ 0.78
SSBP4-214ENST00000607020 ATP6V0A2Q9Y487 856 aa19.91■□□□□ 0.78
SSBP4-214ENST00000607020 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
SSBP4-214ENST00000607020 NTSR2O95665 410 aa19.9■□□□□ 0.78
SSBP4-214ENST00000607020 EIF4A1P60842 406 aaKnown RBP19.9■□□□□ 0.78
SSBP4-214ENST00000607020 SLC10A5Q5PT55 438 aa19.9■□□□□ 0.78
SSBP4-214ENST00000607020 ZC3H15Q8WU90 426 aaKnown RBP19.9■□□□□ 0.78
SSBP4-214ENST00000607020 ZNRF3Q9ULT6 936 aa19.9■□□□□ 0.78
SSBP4-214ENST00000607020 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
SSBP4-214ENST00000607020 THSD7BQ9C0I4 1608 aa19.9■□□□□ 0.78
SSBP4-214ENST00000607020 AOC2O75106 756 aa19.89■□□□□ 0.77
SSBP4-214ENST00000607020 GPTP24298 496 aa19.89■□□□□ 0.77
SSBP4-214ENST00000607020 PPP2R1AP30153 589 aa19.89■□□□□ 0.77
SSBP4-214ENST00000607020 CXCL9Q07325 125 aa19.89■□□□□ 0.77
SSBP4-214ENST00000607020 LTBP1Q14766 1721 aa19.89■□□□□ 0.77
SSBP4-214ENST00000607020 GIGYF2Q6Y7W6 1299 aaKnown RBP19.89■□□□□ 0.77
SSBP4-214ENST00000607020 SUPT20HQ8NEM7 779 aa19.89■□□□□ 0.77
SSBP4-214ENST00000607020 TMX4Q9H1E5 349 aaPredicted RBP19.89■□□□□ 0.77
SSBP4-214ENST00000607020 CACNA1SQ13698 1873 aa19.88■□□□□ 0.77
SSBP4-214ENST00000607020 CDHR2Q9BYE9 1310 aa19.88■□□□□ 0.77
SSBP4-214ENST00000607020 BRPF1P55201 1214 aaPredicted RBP19.88■□□□□ 0.77
SSBP4-214ENST00000607020 PARP10Q53GL7 1025 aa19.88■□□□□ 0.77
SSBP4-214ENST00000607020 C3orf67Q6ZVT6 689 aa19.88■□□□□ 0.77
SSBP4-214ENST00000607020 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
SSBP4-214ENST00000607020 NLRP3Q96P20 1036 aa19.88■□□□□ 0.77
SSBP4-214ENST00000607020 ERBB4Q15303 1308 aa19.87■□□□□ 0.77
SSBP4-214ENST00000607020 CELF2O95319 508 aaKnown RBP19.87■□□□□ 0.77
SSBP4-214ENST00000607020 GRM1Q13255 1194 aa19.87■□□□□ 0.77
SSBP4-214ENST00000607020 AOC3Q16853 763 aa19.87■□□□□ 0.77
SSBP4-214ENST00000607020 SLC51AQ86UW1 340 aa19.87■□□□□ 0.77
SSBP4-214ENST00000607020 ZBTB3Q9H5J0 574 aa19.87■□□□□ 0.77
SSBP4-214ENST00000607020 PCDH10Q9P2E7 1040 aa19.87■□□□□ 0.77
SSBP4-214ENST00000607020 BBOX1O75936 387 aa19.86■□□□□ 0.77
SSBP4-214ENST00000607020 MCOLN1Q9GZU1 580 aa19.86■□□□□ 0.77
SSBP4-214ENST00000607020 TCERG1O14776 1098 aaKnown RBP19.85■□□□□ 0.77
SSBP4-214ENST00000607020 GMPSP49915 693 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-214ENST00000607020 SP8Q8IXZ3 490 aa19.85■□□□□ 0.77
SSBP4-214ENST00000607020 TSKSQ9UJT2 592 aa19.85■□□□□ 0.77
SSBP4-214ENST00000607020 MYL6BP14649 208 aa19.84■□□□□ 0.77
SSBP4-214ENST00000607020 KIAA2012Q0VF49 1180 aa19.84■□□□□ 0.77
SSBP4-214ENST00000607020 CIAPIN1Q6FI81 312 aa19.84■□□□□ 0.77
SSBP4-214ENST00000607020 CDC37L1Q7L3B6 337 aa19.84■□□□□ 0.77
SSBP4-214ENST00000607020 LRP10Q7Z4F1 713 aa19.84■□□□□ 0.77
SSBP4-214ENST00000607020 UTP14AQ9BVJ6 771 aaKnown RBP19.84■□□□□ 0.77
SSBP4-214ENST00000607020 GLIS2Q9BZE0 524 aaPredicted RBP19.84■□□□□ 0.77
SSBP4-214ENST00000607020 HIRAP54198 1017 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-214ENST00000607020 TNIP1Q15025 636 aa19.83■□□□□ 0.77
SSBP4-214ENST00000607020 ABCC4O15439 1325 aa19.82■□□□□ 0.76
SSBP4-214ENST00000607020 DPP8Q6V1X1 898 aaPredicted RBP19.82■□□□□ 0.76
SSBP4-214ENST00000607020 MPNDQ8N594 471 aa19.82■□□□□ 0.76
SSBP4-214ENST00000607020 NEFMP07197 916 aa19.81■□□□□ 0.76
SSBP4-214ENST00000607020 NOGQ13253 232 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms