RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 SLC51AQ86UW1 340 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 TNPO1Q92973 898 aaKnown RBP8.47□□□□□ -1.05
CDC40-207ENST00000606893 FBXW7Q969H0 707 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 DBF4Q9UBU7 674 aaPredicted RBP8.47□□□□□ -1.05
CDC40-207ENST00000606893 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 NIP7Q9Y221 180 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDC40-207ENST00000606893 MARF1Q9Y4F3 1742 aaKnown RBP8.47□□□□□ -1.05
CDC40-207ENST00000606893 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
CDC40-207ENST00000606893 PDCL3Q9H2J4 239 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 ZNF827Q17R98 1081 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 KIF6Q6ZMV9 814 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 TCEANC2Q96MN5 208 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 SHPRHQ149N8 1683 aa8.47□□□□□ -1.05
CDC40-207ENST00000606893 DHX37Q8IY37 1157 aaKnown RBP8.46□□□□□ -1.05
CDC40-207ENST00000606893 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.05
CDC40-207ENST00000606893 A0A087WZG4 1122 aa8.46□□□□□ -1.06
CDC40-207ENST00000606893 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
CDC40-207ENST00000606893 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.06
CDC40-207ENST00000606893 ARHGAP45Q92619 1136 aa8.46□□□□□ -1.06
CDC40-207ENST00000606893 ARHGEF1Q92888 912 aaKnown RBP8.46□□□□□ -1.06
CDC40-207ENST00000606893 TRMT112Q9UI30 125 aaKnown RBP8.46□□□□□ -1.06
CDC40-207ENST00000606893 NBPF7P0C2Y1 421 aaPredicted RBP8.45□□□□□ -1.06
CDC40-207ENST00000606893 CYP19A1P11511 503 aaPredicted RBP8.45□□□□□ -1.06
CDC40-207ENST00000606893 NEK4P51957 841 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 SOS1Q07889 1333 aaPredicted RBP8.45□□□□□ -1.06
CDC40-207ENST00000606893 GAS2L3Q86XJ1 694 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 CHMP5Q9NZZ3 219 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 PTPRCP08575 1304 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 SNAP23O00161 211 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 HMMRO75330 724 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 CCT4P50991 539 aaKnown RBP8.45□□□□□ -1.06
CDC40-207ENST00000606893 HELBQ8NG08 1087 aaPredicted RBP8.45□□□□□ -1.06
CDC40-207ENST00000606893 ZBTB9Q96C00 473 aa8.45□□□□□ -1.06
CDC40-207ENST00000606893 HOXB7P09629 217 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 SIRT2Q8IXJ6 389 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 TEX13AQ9BXU3 409 aaPredicted RBP8.44□□□□□ -1.06
CDC40-207ENST00000606893 HYPKQ9NX55 129 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 NDUFB9Q9Y6M9 179 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 HEG1Q9ULI3 1381 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 ATRNO75882 1429 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 PTMAP06454 111 aaKnown RBP8.44□□□□□ -1.06
CDC40-207ENST00000606893 MAPK8IP2Q13387 824 aaPredicted RBP8.44□□□□□ -1.06
CDC40-207ENST00000606893 DNAAF4Q8WXU2 420 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
CDC40-207ENST00000606893 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
CDC40-207ENST00000606893 ZBTB40Q9NUA8 1239 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 PA2G4Q9UQ80 394 aaKnown RBP8.44□□□□□ -1.06
CDC40-207ENST00000606893 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 JAG2Q9Y219 1238 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 ANKRD26Q9UPS8 1709 aa8.44□□□□□ -1.06
CDC40-207ENST00000606893 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 TNS2Q63HR2 1409 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 GNAI3P08754 354 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 KCNJ4P48050 445 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 UPF1Q92900 1129 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC40-207ENST00000606893 DDX21Q9NR30 783 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDC40-207ENST00000606893 LRRFIP2Q9Y608 721 aaKnown RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 GLI3P10071 1580 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 NKX1-1Q15270 411 aaPredicted RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 NBPF5PQ86XG9 351 aaPredicted RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 COL23A1Q86Y22 540 aaPredicted RBP8.43□□□□□ -1.06
CDC40-207ENST00000606893 STK32BQ9NY57 414 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 COL18A1P39060 1754 aa8.43□□□□□ -1.06
CDC40-207ENST00000606893 CEMIPQ8WUJ3 1361 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 UBTFL1P0CB47 393 aaPredicted RBP8.42□□□□□ -1.06
CDC40-207ENST00000606893 PDIA6Q15084 440 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 TBC1D9BQ66K14 1250 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 ZNF622Q969S3 477 aaKnown RBP eCLIP8.42□□□□□ -1.064e-6■□□□□ 8.2
CDC40-207ENST00000606893 ERBB4Q15303 1308 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 OLFM4Q6UX06 510 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 CHMP4CQ96CF2 233 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 ZNF830Q96NB3 372 aaPredicted RBP8.42□□□□□ -1.06
CDC40-207ENST00000606893 IQSEC3Q9UPP2 1182 aaPredicted RBP8.42□□□□□ -1.06
CDC40-207ENST00000606893 BCL9O00512 1426 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 DLG5Q8TDM6 1919 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 ONECUT3O60422 494 aaPredicted RBP8.42□□□□□ -1.06
CDC40-207ENST00000606893 MMP10P09238 476 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 FAM13BQ9NYF5 915 aa8.42□□□□□ -1.06
CDC40-207ENST00000606893 GSPT1P15170 499 aaKnown RBP8.41□□□□□ -1.06
CDC40-207ENST00000606893 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
CDC40-207ENST00000606893 ZBTB7BO15156 539 aaPredicted RBP8.41□□□□□ -1.06
CDC40-207ENST00000606893 SURF6O75683 361 aaKnown RBP8.41□□□□□ -1.06
CDC40-207ENST00000606893 FERMT3Q86UX7 667 aa8.41□□□□□ -1.06
CDC40-207ENST00000606893 IPO4Q8TEX9 1081 aaKnown RBP8.41□□□□□ -1.06
CDC40-207ENST00000606893 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
CDC40-207ENST00000606893 NCAPD2Q15021 1401 aa8.41□□□□□ -1.06
CDC40-207ENST00000606893 GNAI2P04899 355 aa8.41□□□□□ -1.06
CDC40-207ENST00000606893 SDSP20132 328 aa8.41□□□□□ -1.06
CDC40-207ENST00000606893 GPR101Q96P66 508 aaPredicted RBP8.41□□□□□ -1.06
CDC40-207ENST00000606893 GRPEL1Q9HAV7 217 aa8.41□□□□□ -1.06
CDC40-207ENST00000606893 AK9Q5TCS8 1911 aa8.4□□□□□ -1.06
CDC40-207ENST00000606893 ABCA3Q99758 1704 aa8.4□□□□□ -1.06
CDC40-207ENST00000606893 SYCE3A1L190 88 aa8.4□□□□□ -1.06
CDC40-207ENST00000606893 WTIPA6NIX2 430 aaPredicted RBP8.4□□□□□ -1.06
CDC40-207ENST00000606893 STK3Q13188 491 aa8.4□□□□□ -1.06
CDC40-207ENST00000606893 GOLGA6L22H0YM25 854 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms