RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 STXBP4Q6ZWJ1 553 aa24.24■■□□□ 1.47
SH3D19-211ENST00000604030 ZSCAN29Q8IWY8 852 aaPredicted RBP24.24■■□□□ 1.47
SH3D19-211ENST00000604030 SPECC1LQ69YQ0 1117 aa24.24■■□□□ 1.47
SH3D19-211ENST00000604030 GTPBP4Q9BZE4 634 aaKnown RBP24.24■■□□□ 1.47
SH3D19-211ENST00000604030 RBM27Q9P2N5 1060 aaKnown RBP24.24■■□□□ 1.47
SH3D19-211ENST00000604030 METAP2P50579 478 aaKnown RBP eCLIP24.23■■□□□ 1.47
SH3D19-211ENST00000604030 INTS4Q96HW7 963 aaKnown RBP24.23■■□□□ 1.47
SH3D19-211ENST00000604030 CCT2P78371 535 aaKnown RBP24.23■■□□□ 1.47
SH3D19-211ENST00000604030 TMTC2Q8N394 836 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 TUBBP07437 444 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 PDE1AP54750 535 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 C8orf34Q49A92 452 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 ANKRD24Q8TF21 1146 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 RBM25P49756 843 aaKnown RBP24.23■■□□□ 1.47
SH3D19-211ENST00000604030 RAB3GAP1Q15042 981 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 WAPLQ7Z5K2 1190 aa24.23■■□□□ 1.47
SH3D19-211ENST00000604030 ALDH1L1O75891 902 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 UQCRFS1P1P0C7P4 283 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 RBM5P52756 815 aaKnown RBP eCLIP24.22■■□□□ 1.47
SH3D19-211ENST00000604030 TMEM67Q5HYA8 995 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 MRPS27Q92552 414 aaKnown RBP24.22■■□□□ 1.47
SH3D19-211ENST00000604030 RANBP6O60518 1105 aaKnown RBP24.22■■□□□ 1.47
SH3D19-211ENST00000604030 PRKCSHP14314 528 aaPredicted RBP24.22■■□□□ 1.47
SH3D19-211ENST00000604030 GTF2F1P35269 517 aaKnown RBP eCLIP24.22■■□□□ 1.474e-13■■■□□ 16.4
SH3D19-211ENST00000604030 SYKP43405 635 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 TIGD1Q96MW7 591 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 PRDM10Q9NQV6 1147 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 NOS1P29475 1434 aa24.22■■□□□ 1.47
SH3D19-211ENST00000604030 SSR1P43307 286 aaKnown RBP24.21■■□□□ 1.47
SH3D19-211ENST00000604030 DZIP1Q86YF9 867 aaKnown RBP24.21■■□□□ 1.47
SH3D19-211ENST00000604030 ARFGAP3Q9NP61 516 aa24.21■■□□□ 1.47
SH3D19-211ENST00000604030 CYLC1P35663 651 aaPredicted RBP24.21■■□□□ 1.47
SH3D19-211ENST00000604030 CPLX3Q8WVH0 158 aa24.21■■□□□ 1.47
SH3D19-211ENST00000604030 CUL5Q93034 780 aa24.21■■□□□ 1.47
SH3D19-211ENST00000604030 GSTTP1A0A1W2PQM5 241 aa24.21■■□□□ 1.47
SH3D19-211ENST00000604030 SPECC1Q5M775 1068 aa24.21■■□□□ 1.47
SH3D19-211ENST00000604030 MAP3K2Q9Y2U5 619 aa24.2■■□□□ 1.47
SH3D19-211ENST00000604030 MPHOSPH10O00566 681 aaKnown RBP24.2■■□□□ 1.46
SH3D19-211ENST00000604030 F13A1P00488 732 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 CCDC172P0C7W6 258 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 UBA7P41226 1012 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 SKILP12757 684 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 PHF8Q9UPP1 1060 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 PCDHB15Q9Y5E8 787 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 LDHCP07864 332 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 UBASH3AP57075 661 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 PIBF1Q8WXW3 757 aa24.2■■□□□ 1.46
SH3D19-211ENST00000604030 BBXQ8WY36 941 aaPredicted RBP24.2■■□□□ 1.46
SH3D19-211ENST00000604030 CWC25Q9NXE8 425 aaPredicted RBP24.19■■□□□ 1.46
SH3D19-211ENST00000604030 CCDC113Q9H0I3 377 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 NBPF7P0C2Y1 421 aaPredicted RBP24.19■■□□□ 1.46
SH3D19-211ENST00000604030 GIMAP6Q6P9H5 292 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 HOOK3Q86VS8 718 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 PPP4R3AQ6IN85 833 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 CEP112Q8N8E3 955 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 TTC21AQ8NDW8 1320 aa24.19■■□□□ 1.46
SH3D19-211ENST00000604030 BIN1O00499 593 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 HLTFQ14527 1009 aaKnown RBP eCLIP24.18■■□□□ 1.465e-7■□□□□ 8.4
SH3D19-211ENST00000604030 CCDC40Q4G0X9 1142 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 TTC41PQ6P2S7 1318 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 USP48Q86UV5 1035 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 RNF187Q5TA31 235 aaPredicted RBP24.18■■□□□ 1.46
SH3D19-211ENST00000604030 KRT23Q9C075 422 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CTAGE15A4D2H0 777 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 N4BP3O15049 544 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CTAGE8P0CG41 777 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 MATR3P43243 847 aaKnown RBP eCLIP24.18■■□□□ 1.469e-8■■■□□ 17.5
SH3D19-211ENST00000604030 ATP8B2P98198 1209 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 MFSD6Q6ZSS7 791 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CTAGE6Q86UF2 777 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CTAGE4Q8IX94 777 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CNNM2Q9H8M5 875 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 SLU7O95391 586 aaKnown RBP24.18■■□□□ 1.46
SH3D19-211ENST00000604030 PDE4BQ07343 736 aa24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CCDC85AQ96PX6 553 aaPredicted RBP24.18■■□□□ 1.46
SH3D19-211ENST00000604030 CD109Q6YHK3 1445 aa24.17■■□□□ 1.46
SH3D19-211ENST00000604030 ZC3H6P61129 1189 aaKnown RBP24.17■■□□□ 1.46
SH3D19-211ENST00000604030 SOS1Q07889 1333 aaPredicted RBP24.17■■□□□ 1.46
SH3D19-211ENST00000604030 ANO6Q4KMQ2 910 aa24.17■■□□□ 1.46
SH3D19-211ENST00000604030 SPINK5Q9NQ38 1064 aaPredicted RBP24.17■■□□□ 1.46
SH3D19-211ENST00000604030 HSF2BPO75031 334 aa24.17■■□□□ 1.46
SH3D19-211ENST00000604030 LMAN1P49257 510 aa24.17■■□□□ 1.46
SH3D19-211ENST00000604030 ATL3Q6DD88 541 aa24.17■■□□□ 1.46
SH3D19-211ENST00000604030 TRMT112Q9UI30 125 aaKnown RBP24.17■■□□□ 1.46
SH3D19-211ENST00000604030 PLB1Q6P1J6 1458 aa24.17■■□□□ 1.46
SH3D19-211ENST00000604030 MRPL50Q8N5N7 158 aaKnown RBP24.16■■□□□ 1.46
SH3D19-211ENST00000604030 EIF2AK4Q9P2K8 1649 aaKnown RBP24.16■■□□□ 1.46
SH3D19-211ENST00000604030 NPHP3Q7Z494 1330 aa24.16■■□□□ 1.46
SH3D19-211ENST00000604030 STAMBPO95630 424 aa24.16■■□□□ 1.46
SH3D19-211ENST00000604030 NEBLO76041 1014 aa24.16■■□□□ 1.46
SH3D19-211ENST00000604030 PODXL2Q9NZ53 605 aa24.16■■□□□ 1.46
SH3D19-211ENST00000604030 CCDC186Q7Z3E2 898 aa24.16■■□□□ 1.46
SH3D19-211ENST00000604030 CRACR2BQ8N4Y2 399 aaPredicted RBP24.15■■□□□ 1.46
SH3D19-211ENST00000604030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.15■■□□□ 1.467e-6■□□□□ 8.3
SH3D19-211ENST00000604030 PLVAPQ9BX97 442 aa24.15■■□□□ 1.46
SH3D19-211ENST00000604030 UBE2Q2Q8WVN8 375 aa24.15■■□□□ 1.46
SH3D19-211ENST00000604030 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
SH3D19-211ENST00000604030 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms