RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
DDX55P1-201ENST00000603334 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
DDX55P1-201ENST00000603334 ANKRD31Q8N7Z5 1873 aa12.97□□□□□ -0.33
DDX55P1-201ENST00000603334 ABCC4O15439 1325 aa12.97□□□□□ -0.33
DDX55P1-201ENST00000603334 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.33
DDX55P1-201ENST00000603334 CAMTA2O94983 1202 aa12.96□□□□□ -0.33
DDX55P1-201ENST00000603334 MYL6BP14649 208 aa12.96□□□□□ -0.33
DDX55P1-201ENST00000603334 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX55P1-201ENST00000603334 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
DDX55P1-201ENST00000603334 KCNA3P22001 575 aa12.96□□□□□ -0.34
DDX55P1-201ENST00000603334 AIMP1Q12904 312 aaKnown RBP12.96□□□□□ -0.34
DDX55P1-201ENST00000603334 PDIA6Q15084 440 aa12.96□□□□□ -0.34
DDX55P1-201ENST00000603334 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.34
DDX55P1-201ENST00000603334 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.34
DDX55P1-201ENST00000603334 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.34
DDX55P1-201ENST00000603334 CCT4P50991 539 aaKnown RBP12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 INTS3Q68E01 1043 aaKnown RBP12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 CENPQQ7L2Z9 268 aaPredicted RBP12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
DDX55P1-201ENST00000603334 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
DDX55P1-201ENST00000603334 CAPN15O75808 1086 aa12.94□□□□□ -0.34
DDX55P1-201ENST00000603334 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
DDX55P1-201ENST00000603334 NFIXQ14938 502 aa12.94□□□□□ -0.34
DDX55P1-201ENST00000603334 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
DDX55P1-201ENST00000603334 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
DDX55P1-201ENST00000603334 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 TGFB2P61812 414 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 PROSER3Q2NL68 480 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 ADCY9O60503 1353 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
DDX55P1-201ENST00000603334 PI4KAP2A4QPH2 592 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 DPEP1P16444 411 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 RIC3Q7Z5B4 369 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 PI4KAP1Q8N8J0 262 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
DDX55P1-201ENST00000603334 GRIN3BO60391 1043 aa12.91□□□□□ -0.34
DDX55P1-201ENST00000603334 IGHDP01880 384 aa12.91□□□□□ -0.34
DDX55P1-201ENST00000603334 HSP90AB3PQ58FF7 597 aa12.91□□□□□ -0.34
DDX55P1-201ENST00000603334 KSR2Q6VAB6 950 aa12.91□□□□□ -0.34
DDX55P1-201ENST00000603334 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
DDX55P1-201ENST00000603334 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
DDX55P1-201ENST00000603334 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 SBF1O95248 1867 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 SERPINB2P05120 415 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 SRCIN1Q9C0H9 1055 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 NUP98P52948 1817 aa12.9□□□□□ -0.34
DDX55P1-201ENST00000603334 TPTE2Q6XPS3 522 aa12.89□□□□□ -0.35
DDX55P1-201ENST00000603334 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
DDX55P1-201ENST00000603334 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
DDX55P1-201ENST00000603334 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
DDX55P1-201ENST00000603334 PARP10Q53GL7 1025 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 MEIS3Q99687 375 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 KDM2BQ8NHM5 1336 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 GNAI3P08754 354 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 CHRNA5P30532 468 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 HLFQ16534 295 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 BRIP1Q9BX63 1249 aa12.88□□□□□ -0.35
DDX55P1-201ENST00000603334 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
DDX55P1-201ENST00000603334 ST5P78524 1137 aa12.87□□□□□ -0.35
DDX55P1-201ENST00000603334 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
DDX55P1-201ENST00000603334 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
DDX55P1-201ENST00000603334 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
DDX55P1-201ENST00000603334 GNAI2P04899 355 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 PDE6BP35913 854 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 TCIRG1Q13488 830 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 MYD88Q99836 296 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
DDX55P1-201ENST00000603334 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
DDX55P1-201ENST00000603334 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
DDX55P1-201ENST00000603334 NPHP1O15259 732 aa12.85□□□□□ -0.35
DDX55P1-201ENST00000603334 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
DDX55P1-201ENST00000603334 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
DDX55P1-201ENST00000603334 RGS3P49796 1198 aa12.84□□□□□ -0.35
DDX55P1-201ENST00000603334 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms