RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 MAP1SQ66K74 1059 aaPredicted RBP25.36■■□□□ 1.65
PPFIA3-210ENST00000602800 TTLL7Q6ZT98 887 aa25.36■■□□□ 1.65
PPFIA3-210ENST00000602800 GPTP24298 496 aa25.35■■□□□ 1.65
PPFIA3-210ENST00000602800 ZBTB3Q9H5J0 574 aa25.35■■□□□ 1.65
PPFIA3-210ENST00000602800 PRDM10Q9NQV6 1147 aa25.35■■□□□ 1.65
PPFIA3-210ENST00000602800 GJA3Q9Y6H8 435 aa25.35■■□□□ 1.65
PPFIA3-210ENST00000602800 LMOD1P29536 600 aaPredicted RBP25.34■■□□□ 1.65
PPFIA3-210ENST00000602800 HOXA10P31260 410 aaPredicted RBP25.34■■□□□ 1.65
PPFIA3-210ENST00000602800 CTCFP49711 727 aaPredicted RBP25.34■■□□□ 1.65
PPFIA3-210ENST00000602800 IBTKQ9P2D0 1353 aaPredicted RBP25.33■■□□□ 1.65
PPFIA3-210ENST00000602800 NFE2L2Q16236 605 aa25.33■■□□□ 1.65
PPFIA3-210ENST00000602800 RBM17Q96I25 401 aaKnown RBP25.33■■□□□ 1.65
PPFIA3-210ENST00000602800 SNED1Q8TER0 1413 aa25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 DEFB115Q30KQ5 88 aa25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 SUSD4Q5VX71 490 aa25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 LARGE2Q8N3Y3 721 aa25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 THUMPD2Q9BTF0 503 aaKnown RBP25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 UBN2Q6ZU65 1347 aa25.32■■□□□ 1.64
PPFIA3-210ENST00000602800 RASSF10A6NK89 507 aa25.31■■□□□ 1.64
PPFIA3-210ENST00000602800 CRAMP1Q96RY5 1269 aa25.31■■□□□ 1.64
PPFIA3-210ENST00000602800 PLEKHF1Q96S99 279 aa25.31■■□□□ 1.64
PPFIA3-210ENST00000602800 TMX4Q9H1E5 349 aaPredicted RBP25.31■■□□□ 1.64
PPFIA3-210ENST00000602800 RIC1Q4ADV7 1423 aa25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 PPEF1O14829 653 aaPredicted RBP25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 PPP1R42Q7Z4L9 355 aa25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 ZNF34Q8IZ26 560 aa25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 WBP1LQ9NX94 342 aa25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 ABT1Q9ULW3 272 aaKnown RBP25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
PPFIA3-210ENST00000602800 LAMB4A4D0S4 1761 aa25.29■■□□□ 1.64
PPFIA3-210ENST00000602800 TCERG1O14776 1098 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-210ENST00000602800 GIGYF2Q6Y7W6 1299 aaKnown RBP25.29■■□□□ 1.64
PPFIA3-210ENST00000602800 ERBB4Q15303 1308 aa25.29■■□□□ 1.64
PPFIA3-210ENST00000602800 NTSR2O95665 410 aa25.28■■□□□ 1.64
PPFIA3-210ENST00000602800 PARP10Q53GL7 1025 aa25.28■■□□□ 1.64
PPFIA3-210ENST00000602800 DDX21Q9NR30 783 aaKnown RBP eCLIP25.28■■□□□ 1.64
PPFIA3-210ENST00000602800 ADAMTSL1Q8N6G6 1762 aa25.27■■□□□ 1.64
PPFIA3-210ENST00000602800 NIM1KQ8IY84 436 aa25.27■■□□□ 1.64
PPFIA3-210ENST00000602800 NLRP3Q96P20 1036 aa25.27■■□□□ 1.64
PPFIA3-210ENST00000602800 EPS15P42566 896 aa25.26■■□□□ 1.63
PPFIA3-210ENST00000602800 SCNN1DP51172 638 aa25.26■■□□□ 1.63
PPFIA3-210ENST00000602800 MAP2K1Q02750 393 aaPredicted RBP25.26■■□□□ 1.63
PPFIA3-210ENST00000602800 TSPYL4Q9UJ04 414 aa25.26■■□□□ 1.63
PPFIA3-210ENST00000602800 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
PPFIA3-210ENST00000602800 PPIP5K2O43314 1243 aa25.25■■□□□ 1.63
PPFIA3-210ENST00000602800 LBX1P52954 281 aa25.25■■□□□ 1.63
PPFIA3-210ENST00000602800 USP50Q70EL3 339 aaPredicted RBP25.24■■□□□ 1.63
PPFIA3-210ENST00000602800 UTP14AQ9BVJ6 771 aaKnown RBP25.24■■□□□ 1.63
PPFIA3-210ENST00000602800 KDM3BQ7LBC6 1761 aa25.23■■□□□ 1.63
PPFIA3-210ENST00000602800 EIF2S2P20042 333 aaKnown RBP25.23■■□□□ 1.63
PPFIA3-210ENST00000602800 C3orf67Q6ZVT6 689 aa25.23■■□□□ 1.63
PPFIA3-210ENST00000602800 VPS33BQ9H267 617 aa25.23■■□□□ 1.63
PPFIA3-210ENST00000602800 COL4A5P29400 1685 aa25.23■■□□□ 1.63
PPFIA3-210ENST00000602800 NUP98P52948 1817 aa25.22■■□□□ 1.63
PPFIA3-210ENST00000602800 PAXIP1Q6ZW49 1069 aaPredicted RBP25.22■■□□□ 1.63
PPFIA3-210ENST00000602800 ATP6V0A2Q9Y487 856 aa25.22■■□□□ 1.63
PPFIA3-210ENST00000602800 AOC3Q16853 763 aa25.21■■□□□ 1.63
PPFIA3-210ENST00000602800 SLC51AQ86UW1 340 aa25.21■■□□□ 1.63
PPFIA3-210ENST00000602800 SUPT20HQ8NEM7 779 aa25.21■■□□□ 1.63
PPFIA3-210ENST00000602800 ECE1P42892 770 aa25.2■■□□□ 1.62
PPFIA3-210ENST00000602800 SLC10A5Q5PT55 438 aa25.2■■□□□ 1.62
PPFIA3-210ENST00000602800 HSPA8P11142 646 aaKnown RBP25.19■■□□□ 1.62
PPFIA3-210ENST00000602800 PDIA6Q15084 440 aa25.19■■□□□ 1.62
PPFIA3-210ENST00000602800 LRP10Q7Z4F1 713 aa25.19■■□□□ 1.62
PPFIA3-210ENST00000602800 RIPK4P57078 832 aa25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 FMR1Q06787 632 aaKnown RBP eCLIP25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 HSP90AB3PQ58FF7 597 aa25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 CAPNS2Q96L46 248 aa25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 BEGAINQ9BUH8 593 aa25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 ADARB2Q9NS39 739 aaKnown RBP25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 BABAM1Q9NWV8 329 aa25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 ZNRF3Q9ULT6 936 aa25.18■■□□□ 1.62
PPFIA3-210ENST00000602800 ABCC4O15439 1325 aa25.17■■□□□ 1.62
PPFIA3-210ENST00000602800 BBOX1O75936 387 aa25.17■■□□□ 1.62
PPFIA3-210ENST00000602800 GPRC5DQ9NZD1 345 aa25.17■■□□□ 1.62
PPFIA3-210ENST00000602800 DLG5Q8TDM6 1919 aa25.17■■□□□ 1.62
PPFIA3-210ENST00000602800 TRAF5O00463 557 aa25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 ANXA1P04083 346 aa25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 CXCL9Q07325 125 aa25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 GRM1Q13255 1194 aa25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 PROSER3Q2NL68 480 aa25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 DPP8Q6V1X1 898 aaPredicted RBP25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 RTFDC1Q9BY42 306 aaPredicted RBP25.16■■□□□ 1.62
PPFIA3-210ENST00000602800 LTBP1Q14766 1721 aa25.15■■□□□ 1.62
PPFIA3-210ENST00000602800 LMOD3Q0VAK6 560 aa25.15■■□□□ 1.62
PPFIA3-210ENST00000602800 CST9Q5W186 159 aa25.15■■□□□ 1.62
PPFIA3-210ENST00000602800 MPNDQ8N594 471 aa25.15■■□□□ 1.62
PPFIA3-210ENST00000602800 GPR101Q96P66 508 aaPredicted RBP25.15■■□□□ 1.62
PPFIA3-210ENST00000602800 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.62
PPFIA3-210ENST00000602800 CYP4F22Q6NT55 531 aa25.14■■□□□ 1.62
PPFIA3-210ENST00000602800 COPS6Q7L5N1 327 aa25.14■■□□□ 1.62
PPFIA3-210ENST00000602800 SP8Q8IXZ3 490 aa25.14■■□□□ 1.62
PPFIA3-210ENST00000602800 TLL2Q9Y6L7 1015 aa25.14■■□□□ 1.62
PPFIA3-210ENST00000602800 HCLS1P14317 486 aaPredicted RBP25.13■■□□□ 1.61
PPFIA3-210ENST00000602800 DDX46Q7L014 1031 aaKnown RBP25.13■■□□□ 1.61
PPFIA3-210ENST00000602800 NLRP10Q86W26 655 aa25.13■■□□□ 1.61
PPFIA3-210ENST00000602800 NECTIN2Q92692 538 aa25.13■■□□□ 1.61
PPFIA3-210ENST00000602800 TRMT112Q9UI30 125 aaKnown RBP25.13■■□□□ 1.61
PPFIA3-210ENST00000602800 GMPSP49915 693 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms