RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
SPCS1-205ENST00000602728 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
SPCS1-205ENST00000602728 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
SPCS1-205ENST00000602728 RASSF7Q02833 373 aa13.1□□□□□ -0.31
SPCS1-205ENST00000602728 DALRD3Q5D0E6 543 aaKnown RBP13.1□□□□□ -0.31
SPCS1-205ENST00000602728 PRR5LQ6MZQ0 368 aa13.1□□□□□ -0.31
SPCS1-205ENST00000602728 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
SPCS1-205ENST00000602728 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
SPCS1-205ENST00000602728 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
SPCS1-205ENST00000602728 C1QTNF8P60827 252 aa13.09□□□□□ -0.31
SPCS1-205ENST00000602728 C2CD5Q86YS7 1000 aa13.09□□□□□ -0.31
SPCS1-205ENST00000602728 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
SPCS1-205ENST00000602728 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
SPCS1-205ENST00000602728 RIPK4P57078 832 aa13.08□□□□□ -0.32
SPCS1-205ENST00000602728 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
SPCS1-205ENST00000602728 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
SPCS1-205ENST00000602728 C3orf67Q6ZVT6 689 aa13.08□□□□□ -0.32
SPCS1-205ENST00000602728 GPBP1L1Q9HC44 474 aaPredicted RBP13.08□□□□□ -0.32
SPCS1-205ENST00000602728 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
SPCS1-205ENST00000602728 PRELPP51888 382 aa13.07□□□□□ -0.32
SPCS1-205ENST00000602728 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPCS1-205ENST00000602728 NGEFQ8N5V2 710 aa13.07□□□□□ -0.32
SPCS1-205ENST00000602728 CNBD1Q8NA66 436 aa13.07□□□□□ -0.32
SPCS1-205ENST00000602728 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
SPCS1-205ENST00000602728 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
SPCS1-205ENST00000602728 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 MYL6BP14649 208 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 HLFQ16534 295 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 C9orf131Q5VYM1 1079 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 NPM2Q86SE8 214 aaKnown RBP13.06□□□□□ -0.32
SPCS1-205ENST00000602728 TAF1P21675 1872 aa13.06□□□□□ -0.32
SPCS1-205ENST00000602728 ANXA1P04083 346 aa13.05□□□□□ -0.32
SPCS1-205ENST00000602728 CDAN1Q8IWY9 1227 aa13.05□□□□□ -0.32
SPCS1-205ENST00000602728 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
SPCS1-205ENST00000602728 SETDB2Q96T68 719 aa13.05□□□□□ -0.32
SPCS1-205ENST00000602728 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
SPCS1-205ENST00000602728 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
SPCS1-205ENST00000602728 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
SPCS1-205ENST00000602728 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
SPCS1-205ENST00000602728 SNPHO15079 494 aa13.04□□□□□ -0.32
SPCS1-205ENST00000602728 NPHP1O15259 732 aa13.04□□□□□ -0.32
SPCS1-205ENST00000602728 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
SPCS1-205ENST00000602728 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
SPCS1-205ENST00000602728 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
SPCS1-205ENST00000602728 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
SPCS1-205ENST00000602728 H0YIN7 160 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 NFKBIEO00221 500 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 KIF3CO14782 793 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 ST5P78524 1137 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
SPCS1-205ENST00000602728 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 ZBTB3Q9H5J0 574 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 NMRK2Q9NPI5 230 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
SPCS1-205ENST00000602728 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
SPCS1-205ENST00000602728 LMOD3Q0VAK6 560 aa13.02□□□□□ -0.33
SPCS1-205ENST00000602728 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
SPCS1-205ENST00000602728 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
SPCS1-205ENST00000602728 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
SPCS1-205ENST00000602728 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
SPCS1-205ENST00000602728 C21orf2O43822 256 aa13.01□□□□□ -0.33
SPCS1-205ENST00000602728 EIF2S2P20042 333 aaKnown RBP13.01□□□□□ -0.33
SPCS1-205ENST00000602728 GPTP24298 496 aa13.01□□□□□ -0.33
SPCS1-205ENST00000602728 PDE6BP35913 854 aa13.01□□□□□ -0.33
SPCS1-205ENST00000602728 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
SPCS1-205ENST00000602728 COL4A1P02462 1669 aa13□□□□□ -0.33
SPCS1-205ENST00000602728 PDIA6Q15084 440 aa13□□□□□ -0.33
SPCS1-205ENST00000602728 PRPF40BQ6NWY9 871 aaKnown RBP13□□□□□ -0.33
SPCS1-205ENST00000602728 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
SPCS1-205ENST00000602728 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
SPCS1-205ENST00000602728 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
SPCS1-205ENST00000602728 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
SPCS1-205ENST00000602728 SRGNP10124 158 aa12.99□□□□□ -0.33
SPCS1-205ENST00000602728 OLFM4Q6UX06 510 aa12.99□□□□□ -0.33
SPCS1-205ENST00000602728 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
SPCS1-205ENST00000602728 COL4A5P29400 1685 aa12.99□□□□□ -0.33
SPCS1-205ENST00000602728 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
SPCS1-205ENST00000602728 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
SPCS1-205ENST00000602728 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
SPCS1-205ENST00000602728 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 CHL1O00533 1208 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 APAF1O14727 1248 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 LMNB1P20700 586 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
SPCS1-205ENST00000602728 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
SPCS1-205ENST00000602728 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
SPCS1-205ENST00000602728 NTSR2O95665 410 aa12.96□□□□□ -0.33
SPCS1-205ENST00000602728 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
SPCS1-205ENST00000602728 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
SPCS1-205ENST00000602728 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms