RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 A0A1B0GTH6 734 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 SOBPA7XYQ1 873 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 TXLNAP40222 546 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 C1orf53Q5VUE5 145 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 ALDH16A1Q8IZ83 802 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 NGLY1Q96IV0 654 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 HCN4Q9Y3Q4 1203 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 IQSEC2Q5JU85 1478 aa7.49□□□□□ -1.21
VRK3-222ENST00000601324 PTPRTO14522 1441 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 TRIM26Q12899 539 aaPredicted RBP7.48□□□□□ -1.21
VRK3-222ENST00000601324 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
VRK3-222ENST00000601324 RTN1Q16799 776 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 C16orf46Q6P387 395 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 AIDAQ96BJ3 306 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 MYO19Q96H55 970 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 PHACTR1Q9C0D0 580 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 QTRT2Q9H974 415 aaKnown RBP7.48□□□□□ -1.21
VRK3-222ENST00000601324 DYRK1BQ9Y463 629 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 RAPGEF2Q9Y4G8 1499 aa7.48□□□□□ -1.21
VRK3-222ENST00000601324 TATP17735 454 aaPredicted RBP7.47□□□□□ -1.21
VRK3-222ENST00000601324 ATP4AP20648 1035 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 MSX1P28360 303 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 SERPINB4P48594 390 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
VRK3-222ENST00000601324 EGFL7Q9UHF1 273 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 GPC6Q9Y625 555 aaPredicted RBP7.47□□□□□ -1.21
VRK3-222ENST00000601324 ZMYM4Q5VZL5 1548 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 ARHGEF12Q9NZN5 1544 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 RICTORQ6R327 1708 aa7.47□□□□□ -1.21
VRK3-222ENST00000601324 SENP3-EIF4A1A0A087X0R7 540 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
VRK3-222ENST00000601324 ABL1P00519 1130 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 SNRPBP14678 240 aaKnown RBP7.46□□□□□ -1.22
VRK3-222ENST00000601324 PTSQ03393 145 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 COX20Q5RI15 118 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 SAP130Q9H0E3 1048 aa7.46□□□□□ -1.22
VRK3-222ENST00000601324 DNMT3AQ9Y6K1 912 aaPredicted RBP7.46□□□□□ -1.22
VRK3-222ENST00000601324 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
VRK3-222ENST00000601324 ZNF211Q13398 564 aaPredicted RBP7.45□□□□□ -1.22
VRK3-222ENST00000601324 C7orf43Q8WVR3 580 aa7.45□□□□□ -1.22
VRK3-222ENST00000601324 DENND4BO75064 1496 aaPredicted RBP7.44□□□□□ -1.22
VRK3-222ENST00000601324 SLC35F4A4IF30 521 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 F11P03951 625 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 SF3B2Q13435 895 aaKnown RBP7.44□□□□□ -1.22
VRK3-222ENST00000601324 GAS2L1Q99501 681 aaPredicted RBP7.44□□□□□ -1.22
VRK3-222ENST00000601324 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 GPAMQ9HCL2 828 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 PREX1Q8TCU6 1659 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 POGZQ7Z3K3 1410 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 AKNAQ7Z591 1439 aa7.44□□□□□ -1.22
VRK3-222ENST00000601324 FANCAO15360 1455 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 SOWAHDA6NJG2 315 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 TNFRSF10BO14763 440 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 ICMTO60725 284 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 DGKZQ13574 1117 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 HIF1AQ16665 826 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 GOLGA3Q08378 1498 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 MAGI2Q86UL8 1455 aa7.43□□□□□ -1.22
VRK3-222ENST00000601324 POTECB2RU33 542 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 H3BRB1 525 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 CEBPAP49715 358 aaPredicted RBP7.42□□□□□ -1.22
VRK3-222ENST00000601324 FKBP4Q02790 459 aaKnown RBP eCLIP7.42□□□□□ -1.22
VRK3-222ENST00000601324 MTMR3Q13615 1198 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 ARSJQ5FYB0 599 aaPredicted RBP7.42□□□□□ -1.22
VRK3-222ENST00000601324 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 CCDC155Q8N6L0 562 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 GZF1Q9H116 711 aaPredicted RBP7.42□□□□□ -1.22
VRK3-222ENST00000601324 TUT1Q9H6E5 874 aaKnown RBP7.42□□□□□ -1.22
VRK3-222ENST00000601324 ANO2Q9NQ90 1003 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 STIM2Q9P246 746 aa7.42□□□□□ -1.22
VRK3-222ENST00000601324 NPR3P17342 541 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 SND1Q7KZF4 910 aaKnown RBP eCLIP7.41□□□□□ -1.22
VRK3-222ENST00000601324 GLYCTKQ8IVS8 523 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 SUSD3Q96L08 255 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 ANKIB1Q9P2G1 1089 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 ZFYVE16Q7Z3T8 1539 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 FER1L4A9Z1Z3 1794 aa7.41□□□□□ -1.22
VRK3-222ENST00000601324 A0A1W2PNR3 127 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 TGFBR3LH3BV60 316 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 FAM13AO94988 1023 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 BRD2P25440 801 aaKnown RBP7.4□□□□□ -1.22
VRK3-222ENST00000601324 LBRQ14739 615 aaKnown RBP7.4□□□□□ -1.22
VRK3-222ENST00000601324 IER5Q5VY09 327 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 RIPOR1Q6ZS17 1223 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 NLRP8Q86W28 1048 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 ABTB2Q8N961 1025 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 IFT43Q96FT9 208 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 BCS1LQ9Y276 419 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 NCOA1Q15788 1441 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.22
VRK3-222ENST00000601324 HECW1Q76N89 1606 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms