RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 KDM3BQ7LBC6 1761 aa22.68■■□□□ 1.22
SMG9-210ENST00000600097 CAPN15O75808 1086 aa22.68■■□□□ 1.22
SMG9-210ENST00000600097 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
SMG9-210ENST00000600097 SNED1Q8TER0 1413 aa22.67■■□□□ 1.22
SMG9-210ENST00000600097 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
SMG9-210ENST00000600097 GPTP24298 496 aa22.67■■□□□ 1.22
SMG9-210ENST00000600097 THUMPD2Q9BTF0 503 aaKnown RBP22.67■■□□□ 1.22
SMG9-210ENST00000600097 ZBTB3Q9H5J0 574 aa22.67■■□□□ 1.22
SMG9-210ENST00000600097 UBN2Q6ZU65 1347 aa22.66■■□□□ 1.22
SMG9-210ENST00000600097 EIF6P56537 245 aaKnown RBP22.66■■□□□ 1.22
SMG9-210ENST00000600097 GIGYF2Q6Y7W6 1299 aaKnown RBP22.66■■□□□ 1.22
SMG9-210ENST00000600097 ZNF34Q8IZ26 560 aa22.66■■□□□ 1.22
SMG9-210ENST00000600097 CRAMP1Q96RY5 1269 aa22.66■■□□□ 1.22
SMG9-210ENST00000600097 DLG5Q8TDM6 1919 aa22.65■■□□□ 1.22
SMG9-210ENST00000600097 SUSD4Q5VX71 490 aa22.65■■□□□ 1.22
SMG9-210ENST00000600097 RBM17Q96I25 401 aaKnown RBP22.65■■□□□ 1.22
SMG9-210ENST00000600097 NUP98P52948 1817 aa22.64■■□□□ 1.22
SMG9-210ENST00000600097 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
SMG9-210ENST00000600097 PPP1R42Q7Z4L9 355 aa22.64■■□□□ 1.21
SMG9-210ENST00000600097 CNTROBQ8N137 903 aa22.64■■□□□ 1.21
SMG9-210ENST00000600097 NTSR2O95665 410 aa22.63■■□□□ 1.21
SMG9-210ENST00000600097 TSPYL4Q9UJ04 414 aa22.63■■□□□ 1.21
SMG9-210ENST00000600097 LMOD1P29536 600 aaPredicted RBP22.62■■□□□ 1.21
SMG9-210ENST00000600097 VEGFBP49765 207 aa22.62■■□□□ 1.21
SMG9-210ENST00000600097 LARGE2Q8N3Y3 721 aa22.62■■□□□ 1.21
SMG9-210ENST00000600097 ADAMTSL1Q8N6G6 1762 aa22.61■■□□□ 1.21
SMG9-210ENST00000600097 PPEF1O14829 653 aaPredicted RBP22.61■■□□□ 1.21
SMG9-210ENST00000600097 MAP1SQ66K74 1059 aaPredicted RBP22.61■■□□□ 1.21
SMG9-210ENST00000600097 AIDAQ96BJ3 306 aa22.61■■□□□ 1.21
SMG9-210ENST00000600097 NLRP3Q96P20 1036 aa22.61■■□□□ 1.21
SMG9-210ENST00000600097 TMX4Q9H1E5 349 aaPredicted RBP22.61■■□□□ 1.21
SMG9-210ENST00000600097 BABAM1Q9NWV8 329 aa22.61■■□□□ 1.21
SMG9-210ENST00000600097 GJA3Q9Y6H8 435 aa22.61■■□□□ 1.21
SMG9-210ENST00000600097 FOXN1O15353 648 aa22.6■■□□□ 1.21
SMG9-210ENST00000600097 RASSF10A6NK89 507 aa22.59■■□□□ 1.21
SMG9-210ENST00000600097 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
SMG9-210ENST00000600097 PRDM10Q9NQV6 1147 aa22.59■■□□□ 1.21
SMG9-210ENST00000600097 EIF2S2P20042 333 aaKnown RBP22.58■■□□□ 1.21
SMG9-210ENST00000600097 CTCFP49711 727 aaPredicted RBP22.58■■□□□ 1.21
SMG9-210ENST00000600097 RIPK4P57078 832 aa22.58■■□□□ 1.21
SMG9-210ENST00000600097 PDIA6Q15084 440 aa22.58■■□□□ 1.21
SMG9-210ENST00000600097 DEFB115Q30KQ5 88 aa22.58■■□□□ 1.21
SMG9-210ENST00000600097 SLC10A5Q5PT55 438 aa22.58■■□□□ 1.21
SMG9-210ENST00000600097 NIM1KQ8IY84 436 aa22.58■■□□□ 1.21
SMG9-210ENST00000600097 UTP14AQ9BVJ6 771 aaKnown RBP22.58■■□□□ 1.21
SMG9-210ENST00000600097 VPS33BQ9H267 617 aa22.58■■□□□ 1.21
SMG9-210ENST00000600097 TCERG1O14776 1098 aaKnown RBP22.57■■□□□ 1.2
SMG9-210ENST00000600097 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
SMG9-210ENST00000600097 C3orf67Q6ZVT6 689 aa22.57■■□□□ 1.2
SMG9-210ENST00000600097 COL4A5P29400 1685 aa22.57■■□□□ 1.2
SMG9-210ENST00000600097 SCNN1DP51172 638 aa22.56■■□□□ 1.2
SMG9-210ENST00000600097 WBP1LQ9NX94 342 aa22.56■■□□□ 1.2
SMG9-210ENST00000600097 ATP6V0A2Q9Y487 856 aa22.56■■□□□ 1.2
SMG9-210ENST00000600097 PPIP5K2O43314 1243 aa22.55■■□□□ 1.2
SMG9-210ENST00000600097 EPS15P42566 896 aa22.55■■□□□ 1.2
SMG9-210ENST00000600097 HSP90AB3PQ58FF7 597 aa22.55■■□□□ 1.2
SMG9-210ENST00000600097 USP50Q70EL3 339 aaPredicted RBP22.55■■□□□ 1.2
SMG9-210ENST00000600097 SUPT20HQ8NEM7 779 aa22.55■■□□□ 1.2
SMG9-210ENST00000600097 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
SMG9-210ENST00000600097 RALBP1Q15311 655 aa22.54■■□□□ 1.2
SMG9-210ENST00000600097 ABT1Q9ULW3 272 aaKnown RBP22.54■■□□□ 1.2
SMG9-210ENST00000600097 TMPOP42166 694 aaKnown RBP22.53■■□□□ 1.2
SMG9-210ENST00000600097 PROSER3Q2NL68 480 aa22.53■■□□□ 1.2
SMG9-210ENST00000600097 BBOX1O75936 387 aa22.52■■□□□ 1.2
SMG9-210ENST00000600097 MAP2K1Q02750 393 aaPredicted RBP22.52■■□□□ 1.2
SMG9-210ENST00000600097 AOC3Q16853 763 aa22.52■■□□□ 1.2
SMG9-210ENST00000600097 SLC51AQ86UW1 340 aa22.52■■□□□ 1.2
SMG9-210ENST00000600097 RTFDC1Q9BY42 306 aaPredicted RBP22.52■■□□□ 1.2
SMG9-210ENST00000600097 ABCC4O15439 1325 aa22.52■■□□□ 1.2
SMG9-210ENST00000600097 WDR33Q9C0J8 1336 aaKnown RBP22.52■■□□□ 1.2
SMG9-210ENST00000600097 ANXA1P04083 346 aa22.51■■□□□ 1.19
SMG9-210ENST00000600097 COPS6Q7L5N1 327 aa22.51■■□□□ 1.19
SMG9-210ENST00000600097 ZNRF3Q9ULT6 936 aa22.51■■□□□ 1.19
SMG9-210ENST00000600097 DPP8Q6V1X1 898 aaPredicted RBP22.5■■□□□ 1.19
SMG9-210ENST00000600097 NLRP10Q86W26 655 aa22.5■■□□□ 1.19
SMG9-210ENST00000600097 SP8Q8IXZ3 490 aa22.5■■□□□ 1.19
SMG9-210ENST00000600097 ADARB2Q9NS39 739 aaKnown RBP22.5■■□□□ 1.19
SMG9-210ENST00000600097 GPRC5DQ9NZD1 345 aa22.5■■□□□ 1.19
SMG9-210ENST00000600097 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
SMG9-210ENST00000600097 AIMP1Q12904 312 aaKnown RBP22.49■■□□□ 1.19
SMG9-210ENST00000600097 TCIRG1Q13488 830 aa22.49■■□□□ 1.19
SMG9-210ENST00000600097 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
SMG9-210ENST00000600097 ECE1P42892 770 aa22.48■■□□□ 1.19
SMG9-210ENST00000600097 LBX1P52954 281 aa22.48■■□□□ 1.19
SMG9-210ENST00000600097 CXCL9Q07325 125 aa22.48■■□□□ 1.19
SMG9-210ENST00000600097 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
SMG9-210ENST00000600097 MPNDQ8N594 471 aa22.48■■□□□ 1.19
SMG9-210ENST00000600097 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
SMG9-210ENST00000600097 TRMT112Q9UI30 125 aaKnown RBP22.48■■□□□ 1.19
SMG9-210ENST00000600097 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
SMG9-210ENST00000600097 HCLS1P14317 486 aaPredicted RBP22.47■■□□□ 1.19
SMG9-210ENST00000600097 CHL1O00533 1208 aa22.46■■□□□ 1.19
SMG9-210ENST00000600097 KIAA2012Q0VF49 1180 aa22.46■■□□□ 1.19
SMG9-210ENST00000600097 GRAPQ13588 217 aa22.46■■□□□ 1.19
SMG9-210ENST00000600097 TMC4Q7Z404 712 aa22.46■■□□□ 1.19
SMG9-210ENST00000600097 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
SMG9-210ENST00000600097 CDHR2Q9BYE9 1310 aa22.46■■□□□ 1.19
SMG9-210ENST00000600097 HSPA8P11142 646 aaKnown RBP22.45■■□□□ 1.18
SMG9-210ENST00000600097 FMR1Q06787 632 aaKnown RBP eCLIP22.45■■□□□ 1.18
SMG9-210ENST00000600097 CIAPIN1Q6FI81 312 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms