RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PPP1R14CQ8TAE6 165 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 NECAB1Q8N987 351 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 NEK1Q96PY6 1258 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 UBA7P41226 1012 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 MNAT1P51948 309 aa13.58□□□□□ -0.24
SCN8A-208ENST00000599343 AFMP43652 599 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 MAP3K2Q9Y2U5 619 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 C6orf163Q5TEZ5 329 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 SLC52A1Q9NWF4 448 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 SAMM50Q9Y512 469 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 UBASH3AP57075 661 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 RRAGBQ5VZM2 374 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 DYNC1I1O14576 645 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 JARID2Q92833 1246 aaPredicted RBP13.57□□□□□ -0.24
SCN8A-208ENST00000599343 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 EXOC1Q9NV70 894 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 FBF1Q8TES7 1133 aa13.57□□□□□ -0.24
SCN8A-208ENST00000599343 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 MCM5P33992 734 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 KIAA0753Q2KHM9 967 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 IKBKGQ9Y6K9 419 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 AKR1B10O60218 316 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 FERP16591 822 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 UVSSAQ2YD98 709 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 RSPH14Q9UHP6 348 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 TERF1P54274 439 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 TTLL12Q14166 644 aaPredicted RBP13.56□□□□□ -0.24
SCN8A-208ENST00000599343 RGS22Q8NE09 1264 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 TSNARE1Q96NA8 513 aa13.56□□□□□ -0.24
SCN8A-208ENST00000599343 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
SCN8A-208ENST00000599343 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 SYKP43405 635 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 FLIIQ13045 1269 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 LRRC2Q9BYS8 371 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
SCN8A-208ENST00000599343 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 KIF5BP33176 963 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 KANK3Q6NY19 840 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 PRG4Q92954 1404 aaPredicted RBP13.55□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC171Q6TFL3 1326 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 TTC22Q5TAA0 569 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC155Q8N6L0 562 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 BICD1Q96G01 975 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 HYPKQ9NX55 129 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 IGHDP01880 384 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 PTGS1P23219 599 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 MXRA7P84157 204 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 MCM6Q14566 821 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 NCOA7Q8NI08 942 aa13.55□□□□□ -0.24
SCN8A-208ENST00000599343 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
SCN8A-208ENST00000599343 PRIMPOLQ96LW4 560 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
SCN8A-208ENST00000599343 HSPA4P34932 840 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 CKAP4Q07065 602 aaKnown RBP13.54□□□□□ -0.24
SCN8A-208ENST00000599343 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN8A-208ENST00000599343 V9GYY5 206 aaPredicted RBP13.54□□□□□ -0.24
SCN8A-208ENST00000599343 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 TIGD1Q96MW7 591 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 SKILP12757 684 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 GRIPAP1Q4V328 841 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 TMX3Q96JJ7 454 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 CTAGE15A4D2H0 777 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 CTAGE8P0CG41 777 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 ACTN2P35609 894 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 CTAGE6Q86UF2 777 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 SPATA24Q86W54 205 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 CTAGE4Q8IX94 777 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 FEZ1Q99689 392 aa13.54□□□□□ -0.24
SCN8A-208ENST00000599343 IFI16Q16666 785 aaKnown RBP13.53□□□□□ -0.24
SCN8A-208ENST00000599343 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC6Q16204 474 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 CCDC186Q7Z3E2 898 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-208ENST00000599343 PTPRCP08575 1304 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 KLF18A0A0U1RQI7 1052 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 TCEANC2Q96MN5 208 aa13.53□□□□□ -0.24
SCN8A-208ENST00000599343 TTF1Q15361 905 aaPredicted RBP13.53□□□□□ -0.24
SCN8A-208ENST00000599343 APBB1IPQ7Z5R6 666 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms