RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, human

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYMPK-208	ENST00000598059	HOXA10	P31260	410 aa	Predicted RBP	27.9	■■■□□ 2.06
SYMPK-208	ENST00000598059	KLRG1	Q96E93	195 aa		27.9	■■■□□ 2.06
SYMPK-208	ENST00000598059	PARP10	Q53GL7	1025 aa		27.89	■■■□□ 2.06
SYMPK-208	ENST00000598059	PPP1R42	Q7Z4L9	355 aa		27.89	■■■□□ 2.06
SYMPK-208	ENST00000598059	MIER1	Q8N108	512 aa		27.89	■■■□□ 2.06
SYMPK-208	ENST00000598059	RPGR	Q92834	1020 aa	Known RBP	27.89	■■■□□ 2.06
SYMPK-208	ENST00000598059	SNED1	Q8TER0	1413 aa		27.89	■■■□□ 2.06
SYMPK-208	ENST00000598059	NECTIN2	Q92692	538 aa		27.88	■■■□□ 2.05
SYMPK-208	ENST00000598059	KRT24	Q2M2I5	525 aa		27.87	■■■□□ 2.05
SYMPK-208	ENST00000598059	COPS6	Q7L5N1	327 aa		27.86	■■■□□ 2.05
SYMPK-208	ENST00000598059	SYNE4	Q8N205	404 aa		27.86	■■■□□ 2.05
SYMPK-208	ENST00000598059	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.86	■■■□□ 2.05
SYMPK-208	ENST00000598059	PSMD1	Q99460	953 aa		27.86	■■■□□ 2.05
SYMPK-208	ENST00000598059	LAS1L	Q9Y4W2	734 aa	Known RBP	27.86	■■■□□ 2.05
SYMPK-208	ENST00000598059	SCN4A	P35499	1836 aa		27.85	■■■□□ 2.05
SYMPK-208	ENST00000598059	IARS	P41252	1262 aa	Known RBP	27.85	■■■□□ 2.05
SYMPK-208	ENST00000598059	CCDC184	Q52MB2	194 aa		27.85	■■■□□ 2.05
SYMPK-208	ENST00000598059	CC2D2B	Q6DHV5	1058 aa		27.85	■■■□□ 2.05
SYMPK-208	ENST00000598059	ANKRD36C	Q5JPF3	1778 aa		27.85	■■■□□ 2.05
SYMPK-208	ENST00000598059	AIMP1	Q12904	312 aa	Known RBP	27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	C3orf67	Q6ZVT6	689 aa		27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	XAGE3	Q8WTP9	111 aa		27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	RBM17	Q96I25	401 aa	Known RBP	27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	CRAMP1	Q96RY5	1269 aa		27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	UTP14A	Q9BVJ6	771 aa	Known RBP	27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	DDX21	Q9NR30	783 aa	Known RBP eCLIP	27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	ZNF541	Q9H0D2	1346 aa		27.84	■■■□□ 2.05
SYMPK-208	ENST00000598059	IQCA1L	A6NCM1	817 aa		27.83	■■■□□ 2.05
SYMPK-208	ENST00000598059	IFFO2	Q5TF58	517 aa		27.83	■■■□□ 2.05
SYMPK-208	ENST00000598059	JMY	Q8N9B5	988 aa		27.83	■■■□□ 2.05
SYMPK-208	ENST00000598059	POTEI	P0CG38	1075 aa		27.82	■■■□□ 2.04
SYMPK-208	ENST00000598059	POTEJ	P0CG39	1038 aa		27.82	■■■□□ 2.04
SYMPK-208	ENST00000598059	HSP90AB3P	Q58FF7	597 aa		27.82	■■■□□ 2.04
SYMPK-208	ENST00000598059	SLC10A5	Q5PT55	438 aa		27.82	■■■□□ 2.04
SYMPK-208	ENST00000598059	CHADL	Q6NUI6	762 aa		27.82	■■■□□ 2.04
SYMPK-208	ENST00000598059	NLRP3	Q96P20	1036 aa		27.82	■■■□□ 2.04
SYMPK-208	ENST00000598059	FZD9	O00144	591 aa		27.81	■■■□□ 2.04
SYMPK-208	ENST00000598059	GRIPAP1	Q4V328	841 aa		27.8	■■■□□ 2.04
SYMPK-208	ENST00000598059	CFAP44	Q96MT7	982 aa		27.8	■■■□□ 2.04
SYMPK-208	ENST00000598059	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.8	■■■□□ 2.04
SYMPK-208	ENST00000598059	CHPF2	Q9P2E5	772 aa		27.8	■■■□□ 2.04
SYMPK-208	ENST00000598059	RNF123	Q5XPI4	1314 aa		27.8	■■■□□ 2.04
SYMPK-208	ENST00000598059	PPEF1	O14829	653 aa	Predicted RBP	27.79	■■■□□ 2.04
SYMPK-208	ENST00000598059	HOXB7	P09629	217 aa		27.79	■■■□□ 2.04
SYMPK-208	ENST00000598059	NLRP10	Q86W26	655 aa		27.79	■■■□□ 2.04
SYMPK-208	ENST00000598059	TCIRG1	Q13488	830 aa		27.78	■■■□□ 2.04
SYMPK-208	ENST00000598059	HDGFL1	Q5TGJ6	251 aa		27.78	■■■□□ 2.04
SYMPK-208	ENST00000598059	SLC51A	Q86UW1	340 aa		27.78	■■■□□ 2.04
SYMPK-208	ENST00000598059	JDP2	Q8WYK2	163 aa		27.78	■■■□□ 2.04
SYMPK-208	ENST00000598059	LAMB2	P55268	1798 aa		27.76	■■■□□ 2.03
SYMPK-208	ENST00000598059	COL4A5	P29400	1685 aa		27.76	■■■□□ 2.03
SYMPK-208	ENST00000598059	TCERG1	O14776	1098 aa	Known RBP	27.76	■■■□□ 2.03
SYMPK-208	ENST00000598059	LDHD	Q86WU2	507 aa		27.76	■■■□□ 2.03
SYMPK-208	ENST00000598059	CCER2	I3L3R5	266 aa		27.75	■■■□□ 2.03
SYMPK-208	ENST00000598059	GPC2	Q8N158	579 aa		27.75	■■■□□ 2.03
SYMPK-208	ENST00000598059	DBF4	Q9UBU7	674 aa	Predicted RBP	27.75	■■■□□ 2.03
SYMPK-208	ENST00000598059	HACL1	Q9UJ83	578 aa		27.75	■■■□□ 2.03
SYMPK-208	ENST00000598059	ABCC4	O15439	1325 aa		27.74	■■■□□ 2.03
SYMPK-208	ENST00000598059	MBIP	Q9NS73	344 aa		27.74	■■■□□ 2.03
SYMPK-208	ENST00000598059	TRMT112	Q9UI30	125 aa	Known RBP	27.74	■■■□□ 2.03
SYMPK-208	ENST00000598059	APAF1	O14727	1248 aa		27.73	■■■□□ 2.03
SYMPK-208	ENST00000598059	ZNF853	P0CG23	659 aa		27.73	■■■□□ 2.03
SYMPK-208	ENST00000598059	HCLS1	P14317	486 aa	Predicted RBP	27.73	■■■□□ 2.03
SYMPK-208	ENST00000598059	DUSP27	Q5VZP5	1158 aa		27.73	■■■□□ 2.03
SYMPK-208	ENST00000598059	PLBD2	Q8NHP8	589 aa		27.73	■■■□□ 2.03
SYMPK-208	ENST00000598059	ATP6V0A2	Q9Y487	856 aa		27.73	■■■□□ 2.03
SYMPK-208	ENST00000598059	SH3TC1	Q8TE82	1336 aa		27.72	■■■□□ 2.03
SYMPK-208	ENST00000598059	EPHX2	P34913	555 aa		27.72	■■■□□ 2.03
SYMPK-208	ENST00000598059	ANKRD13D	Q6ZTN6	518 aa		27.72	■■■□□ 2.03
SYMPK-208	ENST00000598059	LARGE2	Q8N3Y3	721 aa		27.72	■■■□□ 2.03
SYMPK-208	ENST00000598059	EIF6	P56537	245 aa	Known RBP	27.71	■■■□□ 2.03
SYMPK-208	ENST00000598059	EAPP	Q56P03	285 aa	Predicted RBP	27.71	■■■□□ 2.03
SYMPK-208	ENST00000598059	TMX4	Q9H1E5	349 aa	Predicted RBP	27.71	■■■□□ 2.03
SYMPK-208	ENST00000598059	MRS2	Q9HD23	443 aa		27.71	■■■□□ 2.03
SYMPK-208	ENST00000598059	CREBZF	Q9NS37	354 aa		27.71	■■■□□ 2.03
SYMPK-208	ENST00000598059	HYPK	Q9NX55	129 aa		27.7	■■■□□ 2.02
SYMPK-208	ENST00000598059	ADAMTSL1	Q8N6G6	1762 aa		27.7	■■■□□ 2.02
SYMPK-208	ENST00000598059	PASK	Q96RG2	1323 aa		27.69	■■■□□ 2.02
SYMPK-208	ENST00000598059	BBOX1	O75936	387 aa		27.69	■■■□□ 2.02
SYMPK-208	ENST00000598059	IFT57	Q9NWB7	429 aa		27.69	■■■□□ 2.02
SYMPK-208	ENST00000598059	TAF1	P21675	1872 aa		27.68	■■■□□ 2.02
SYMPK-208	ENST00000598059	PNMA8A	Q86V59	439 aa	Predicted RBP	27.68	■■■□□ 2.02
SYMPK-208	ENST00000598059	ZNF428	Q96B54	188 aa		27.68	■■■□□ 2.02
SYMPK-208	ENST00000598059	ISCA1	Q9BUE6	129 aa		27.68	■■■□□ 2.02
SYMPK-208	ENST00000598059	GJA3	Q9Y6H8	435 aa		27.68	■■■□□ 2.02
SYMPK-208	ENST00000598059	CALD1	Q05682	793 aa	Known RBP	27.67	■■■□□ 2.02
SYMPK-208	ENST00000598059	DDX46	Q7L014	1031 aa	Known RBP	27.67	■■■□□ 2.02
SYMPK-208	ENST00000598059	PPIP5K2	O43314	1243 aa		27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	ITGBL1	O95965	494 aa	Predicted RBP	27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	GNAI1	P63096	354 aa		27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	SP8	Q8IXZ3	490 aa		27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	NIM1K	Q8IY84	436 aa		27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	VPS33B	Q9H267	617 aa		27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	CLEC11A	Q9Y240	323 aa		27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	DDX60	Q8IY21	1712 aa	Known RBP	27.66	■■■□□ 2.02
SYMPK-208	ENST00000598059	ATP5J2-PTCD1	G3V325	749 aa		27.65	■■■□□ 2.02
SYMPK-208	ENST00000598059	GRAP	Q13588	217 aa		27.65	■■■□□ 2.02
SYMPK-208	ENST00000598059	AOC3	Q16853	763 aa		27.65	■■■□□ 2.02
SYMPK-208	ENST00000598059	GRAPL	Q8TC17	118 aa	Predicted RBP	27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms