RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 BABAM1Q9NWV8 329 aa22.38■■□□□ 1.17
PNKP-210ENST00000597965 MKRN1Q9UHC7 482 aaKnown RBP22.38■■□□□ 1.17
PNKP-210ENST00000597965 ZNF541Q9H0D2 1346 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 TMEM88BA6NKF7 163 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 PARP10Q53GL7 1025 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 GIGYF2Q6Y7W6 1299 aaKnown RBP22.37■■□□□ 1.17
PNKP-210ENST00000597965 CRAMP1Q96RY5 1269 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 ZBTB3Q9H5J0 574 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 TSPYL4Q9UJ04 414 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 CNTNAP1P78357 1384 aa22.37■■□□□ 1.17
PNKP-210ENST00000597965 GPTP24298 496 aa22.36■■□□□ 1.17
PNKP-210ENST00000597965 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
PNKP-210ENST00000597965 OLFM4Q6UX06 510 aa22.36■■□□□ 1.17
PNKP-210ENST00000597965 TTLL7Q6ZT98 887 aa22.36■■□□□ 1.17
PNKP-210ENST00000597965 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
PNKP-210ENST00000597965 ABCC12Q96J65 1359 aa22.36■■□□□ 1.17
PNKP-210ENST00000597965 LMOD1P29536 600 aaPredicted RBP22.35■■□□□ 1.17
PNKP-210ENST00000597965 RNF123Q5XPI4 1314 aa22.34■■□□□ 1.17
PNKP-210ENST00000597965 ITGBL1O95965 494 aaPredicted RBP22.34■■□□□ 1.17
PNKP-210ENST00000597965 NLRP3Q96P20 1036 aa22.34■■□□□ 1.17
PNKP-210ENST00000597965 THUMPD2Q9BTF0 503 aaKnown RBP22.34■■□□□ 1.17
PNKP-210ENST00000597965 VPS33BQ9H267 617 aa22.34■■□□□ 1.17
PNKP-210ENST00000597965 UBN2Q6ZU65 1347 aa22.33■■□□□ 1.17
PNKP-210ENST00000597965 PPEF1O14829 653 aaPredicted RBP22.33■■□□□ 1.17
PNKP-210ENST00000597965 RALBP1Q15311 655 aa22.33■■□□□ 1.17
PNKP-210ENST00000597965 SUSD4Q5VX71 490 aa22.33■■□□□ 1.17
PNKP-210ENST00000597965 SNED1Q8TER0 1413 aa22.32■■□□□ 1.16
PNKP-210ENST00000597965 RIPK4P57078 832 aa22.32■■□□□ 1.16
PNKP-210ENST00000597965 HSP90AB3PQ58FF7 597 aa22.32■■□□□ 1.16
PNKP-210ENST00000597965 CNTROBQ8N137 903 aa22.32■■□□□ 1.16
PNKP-210ENST00000597965 LARGE2Q8N3Y3 721 aa22.32■■□□□ 1.16
PNKP-210ENST00000597965 AIDAQ96BJ3 306 aa22.32■■□□□ 1.16
PNKP-210ENST00000597965 NTSR2O95665 410 aa22.31■■□□□ 1.16
PNKP-210ENST00000597965 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
PNKP-210ENST00000597965 ADAMTSL1Q8N6G6 1762 aa22.3■■□□□ 1.16
PNKP-210ENST00000597965 GJA3Q9Y6H8 435 aa22.3■■□□□ 1.16
PNKP-210ENST00000597965 CAPN15O75808 1086 aa22.29■■□□□ 1.16
PNKP-210ENST00000597965 EIF2S2P20042 333 aaKnown RBP22.29■■□□□ 1.16
PNKP-210ENST00000597965 SLC10A5Q5PT55 438 aa22.29■■□□□ 1.16
PNKP-210ENST00000597965 NIM1KQ8IY84 436 aa22.29■■□□□ 1.16
PNKP-210ENST00000597965 SUPT20HQ8NEM7 779 aa22.29■■□□□ 1.16
PNKP-210ENST00000597965 MAP1SQ66K74 1059 aaPredicted RBP22.27■■□□□ 1.16
PNKP-210ENST00000597965 USP50Q70EL3 339 aaPredicted RBP22.27■■□□□ 1.16
PNKP-210ENST00000597965 PRDM10Q9NQV6 1147 aa22.27■■□□□ 1.16
PNKP-210ENST00000597965 ATP6V0A2Q9Y487 856 aa22.27■■□□□ 1.16
PNKP-210ENST00000597965 RASSF10A6NK89 507 aa22.26■■□□□ 1.15
PNKP-210ENST00000597965 PPIP5K2O43314 1243 aa22.26■■□□□ 1.15
PNKP-210ENST00000597965 BBOX1O75936 387 aa22.26■■□□□ 1.15
PNKP-210ENST00000597965 CTCFP49711 727 aaPredicted RBP22.26■■□□□ 1.15
PNKP-210ENST00000597965 VEGFBP49765 207 aa22.26■■□□□ 1.15
PNKP-210ENST00000597965 DEFB115Q30KQ5 88 aa22.26■■□□□ 1.15
PNKP-210ENST00000597965 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
PNKP-210ENST00000597965 PDIA6Q15084 440 aa22.25■■□□□ 1.15
PNKP-210ENST00000597965 TCERG1O14776 1098 aaKnown RBP22.24■■□□□ 1.15
PNKP-210ENST00000597965 LRP10Q7Z4F1 713 aa22.24■■□□□ 1.15
PNKP-210ENST00000597965 ABT1Q9ULW3 272 aaKnown RBP22.24■■□□□ 1.15
PNKP-210ENST00000597965 FOXN1O15353 648 aa22.23■■□□□ 1.15
PNKP-210ENST00000597965 SCNN1DP51172 638 aa22.23■■□□□ 1.15
PNKP-210ENST00000597965 MAP2K1Q02750 393 aaPredicted RBP22.23■■□□□ 1.15
PNKP-210ENST00000597965 DDX21Q9NR30 783 aaKnown RBP eCLIP22.23■■□□□ 1.15
PNKP-210ENST00000597965 DDX46Q7L014 1031 aaKnown RBP22.22■■□□□ 1.15
PNKP-210ENST00000597965 COPS6Q7L5N1 327 aa22.22■■□□□ 1.15
PNKP-210ENST00000597965 TMC4Q7Z404 712 aa22.22■■□□□ 1.15
PNKP-210ENST00000597965 SP8Q8IXZ3 490 aa22.22■■□□□ 1.15
PNKP-210ENST00000597965 RTFDC1Q9BY42 306 aaPredicted RBP22.22■■□□□ 1.15
PNKP-210ENST00000597965 ZNRF3Q9ULT6 936 aa22.22■■□□□ 1.15
PNKP-210ENST00000597965 ABCC4O15439 1325 aa22.22■■□□□ 1.15
PNKP-210ENST00000597965 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
PNKP-210ENST00000597965 DPP8Q6V1X1 898 aaPredicted RBP22.21■■□□□ 1.15
PNKP-210ENST00000597965 ADARB2Q9NS39 739 aaKnown RBP22.21■■□□□ 1.15
PNKP-210ENST00000597965 WBP1LQ9NX94 342 aa22.21■■□□□ 1.15
PNKP-210ENST00000597965 TRMT112Q9UI30 125 aaKnown RBP22.21■■□□□ 1.15
PNKP-210ENST00000597965 SH3TC1Q8TE82 1336 aa22.21■■□□□ 1.15
PNKP-210ENST00000597965 EPS15P42566 896 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 ECE1P42892 770 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 AIMP1Q12904 312 aaKnown RBP22.2■■□□□ 1.14
PNKP-210ENST00000597965 TCIRG1Q13488 830 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 AOC3Q16853 763 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 C3orf67Q6ZVT6 689 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 CDHR2Q9BYE9 1310 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 COL4A5P29400 1685 aa22.2■■□□□ 1.14
PNKP-210ENST00000597965 HOXB7P09629 217 aa22.19■■□□□ 1.14
PNKP-210ENST00000597965 PROSER3Q2NL68 480 aa22.19■■□□□ 1.14
PNKP-210ENST00000597965 MPNDQ8N594 471 aa22.19■■□□□ 1.14
PNKP-210ENST00000597965 XAGE3Q8WTP9 111 aa22.19■■□□□ 1.14
PNKP-210ENST00000597965 MYBBP1AQ9BQG0 1328 aaKnown RBP22.19■■□□□ 1.14
PNKP-210ENST00000597965 WDR33Q9C0J8 1336 aaKnown RBP22.19■■□□□ 1.14
PNKP-210ENST00000597965 TNIP1Q15025 636 aa22.18■■□□□ 1.14
PNKP-210ENST00000597965 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
PNKP-210ENST00000597965 GPRC5DQ9NZD1 345 aa22.18■■□□□ 1.14
PNKP-210ENST00000597965 CHL1O00533 1208 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 ANXA1P04083 346 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 GRAPQ13588 217 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 NEUROD2Q15784 382 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
PNKP-210ENST00000597965 RUNDC1Q96C34 613 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 BEGAINQ9BUH8 593 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 LTBP1Q14766 1721 aa22.17■■□□□ 1.14
PNKP-210ENST00000597965 HCLS1P14317 486 aaPredicted RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms