RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
SOX2-OT-228ENST00000597828 COL4A1P02462 1669 aa15.94■□□□□ 0.14
SOX2-OT-228ENST00000597828 ALDH1B1P30837 517 aa15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 COL13A1Q5TAT6 717 aaPredicted RBP15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 GIGYF2Q6Y7W6 1299 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 L3MBTL3Q96JM7 780 aaPredicted RBP15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 TAF1DQ9H5J8 278 aaPredicted RBP15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 RNF123Q5XPI4 1314 aa15.93■□□□□ 0.14
SOX2-OT-228ENST00000597828 MYH3P11055 1940 aa15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 TCERG1O14776 1098 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 RALBP1Q15311 655 aa15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 RPGRQ92834 1020 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-228ENST00000597828 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 EAPPQ56P03 285 aaPredicted RBP15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 MKRN1Q9UHC7 482 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 MYBBP1AQ9BQG0 1328 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-228ENST00000597828 IQCA1LA6NCM1 817 aa15.9■□□□□ 0.14
SOX2-OT-228ENST00000597828 FZD9O00144 591 aa15.9■□□□□ 0.14
SOX2-OT-228ENST00000597828 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
SOX2-OT-228ENST00000597828 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
SOX2-OT-228ENST00000597828 PASKQ96RG2 1323 aa15.9■□□□□ 0.14
SOX2-OT-228ENST00000597828 PPEF1O14829 653 aaPredicted RBP15.89■□□□□ 0.13
SOX2-OT-228ENST00000597828 HOXA10P31260 410 aaPredicted RBP15.89■□□□□ 0.13
SOX2-OT-228ENST00000597828 PSMD1Q99460 953 aa15.89■□□□□ 0.13
SOX2-OT-228ENST00000597828 HACL1Q9UJ83 578 aa15.89■□□□□ 0.13
SOX2-OT-228ENST00000597828 PSME4Q14997 1843 aa15.89■□□□□ 0.13
SOX2-OT-228ENST00000597828 SCN9AQ15858 1988 aa15.88■□□□□ 0.13
SOX2-OT-228ENST00000597828 THSD7BQ9C0I4 1608 aa15.88■□□□□ 0.13
SOX2-OT-228ENST00000597828 EPHX2P34913 555 aa15.88■□□□□ 0.13
SOX2-OT-228ENST00000597828 AIMP1Q12904 312 aaKnown RBP15.88■□□□□ 0.13
SOX2-OT-228ENST00000597828 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
SOX2-OT-228ENST00000597828 PPP1R42Q7Z4L9 355 aa15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 XAGE3Q8WTP9 111 aa15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 CRAMP1Q96RY5 1269 aa15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 GJA3Q9Y6H8 435 aa15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 ABCC4O15439 1325 aa15.87■□□□□ 0.13
SOX2-OT-228ENST00000597828 ITGBL1O95965 494 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 LMOD3Q0VAK6 560 aa15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 COPS6Q7L5N1 327 aa15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 GPC2Q8N158 579 aa15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 CNTNAP1P78357 1384 aa15.86■□□□□ 0.13
SOX2-OT-228ENST00000597828 MAP1SQ66K74 1059 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 CC2D2BQ6DHV5 1058 aa15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 LARGE2Q8N3Y3 721 aa15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 CHPF2Q9P2E5 772 aa15.85■□□□□ 0.13
SOX2-OT-228ENST00000597828 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
SOX2-OT-228ENST00000597828 AOC3Q16853 763 aa15.84■□□□□ 0.13
SOX2-OT-228ENST00000597828 NLRP10Q86W26 655 aa15.84■□□□□ 0.13
SOX2-OT-228ENST00000597828 NLRP3Q96P20 1036 aa15.84■□□□□ 0.13
SOX2-OT-228ENST00000597828 CHL1O00533 1208 aa15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 CAPN15O75808 1086 aa15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 SCNN1DP51172 638 aa15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 EIF6P56537 245 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 RUNDC1Q96C34 613 aa15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
SOX2-OT-228ENST00000597828 ZNF646O15015 1829 aaPredicted RBP15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 CACNA1FO60840 1977 aa15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 FMR1Q06787 632 aaKnown RBP eCLIP15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 ATP6V0A2Q9Y487 856 aa15.82■□□□□ 0.12
SOX2-OT-228ENST00000597828 TMEM88BA6NKF7 163 aa15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 EPS15P42566 896 aa15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 TCIRG1Q13488 830 aa15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 NIM1KQ8IY84 436 aa15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
SOX2-OT-228ENST00000597828 VEGFBP49765 207 aa15.8■□□□□ 0.12
SOX2-OT-228ENST00000597828 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
SOX2-OT-228ENST00000597828 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
SOX2-OT-228ENST00000597828 SH3TC1Q8TE82 1336 aa15.79■□□□□ 0.12
SOX2-OT-228ENST00000597828 FOXN1O15353 648 aa15.79■□□□□ 0.12
SOX2-OT-228ENST00000597828 LMOD1P29536 600 aaPredicted RBP15.79■□□□□ 0.12
SOX2-OT-228ENST00000597828 A0A1B0GUL6 1792 aa15.79■□□□□ 0.12
SOX2-OT-228ENST00000597828 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
SOX2-OT-228ENST00000597828 GRIPAP1Q4V328 841 aa15.78■□□□□ 0.12
SOX2-OT-228ENST00000597828 PRKRIP1Q9H875 184 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms