RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 TOMM70O94826 608 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 NTSR2O95665 410 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 HOXB7P09629 217 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 COPS6Q7L5N1 327 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 TAOK3Q9H2K8 898 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 DDX21Q9NR30 783 aaKnown RBP eCLIP19.92■□□□□ 0.78
XRCC1-206ENST00000597811 CHPF2Q9P2E5 772 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 LTBP3Q9NS15 1303 aa19.92■□□□□ 0.78
XRCC1-206ENST00000597811 CRY2Q49AN0 593 aa19.91■□□□□ 0.78
XRCC1-206ENST00000597811 SOGA3Q5TF21 947 aa19.91■□□□□ 0.78
XRCC1-206ENST00000597811 C8orf58Q8NAV2 365 aa19.91■□□□□ 0.78
XRCC1-206ENST00000597811 RRAGCQ9HB90 399 aa19.91■□□□□ 0.78
XRCC1-206ENST00000597811 HSPA6P17066 643 aa19.9■□□□□ 0.78
XRCC1-206ENST00000597811 OLFM4Q6UX06 510 aa19.9■□□□□ 0.78
XRCC1-206ENST00000597811 DBF4Q9UBU7 674 aaPredicted RBP19.9■□□□□ 0.78
XRCC1-206ENST00000597811 GLTPD2A6NH11 291 aa19.89■□□□□ 0.77
XRCC1-206ENST00000597811 PARP10Q53GL7 1025 aa19.89■□□□□ 0.77
XRCC1-206ENST00000597811 CCDC93Q567U6 631 aa19.89■□□□□ 0.77
XRCC1-206ENST00000597811 WDR90Q96KV7 1748 aa19.89■□□□□ 0.77
XRCC1-206ENST00000597811 CHMP4AQ9BY43 222 aa19.89■□□□□ 0.77
XRCC1-206ENST00000597811 MYH16Q9H6N6 1097 aa19.89■□□□□ 0.77
XRCC1-206ENST00000597811 ALDH1B1P30837 517 aa19.88■□□□□ 0.77
XRCC1-206ENST00000597811 GOLGA2Q08379 1002 aa19.88■□□□□ 0.77
XRCC1-206ENST00000597811 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
XRCC1-206ENST00000597811 FANCIQ9NVI1 1328 aa19.87■□□□□ 0.77
XRCC1-206ENST00000597811 C3orf67Q6ZVT6 689 aa19.87■□□□□ 0.77
XRCC1-206ENST00000597811 TSPYL6Q8N831 410 aa19.87■□□□□ 0.77
XRCC1-206ENST00000597811 SNED1Q8TER0 1413 aa19.86■□□□□ 0.77
XRCC1-206ENST00000597811 DDX60Q8IY21 1712 aaKnown RBP19.86■□□□□ 0.77
XRCC1-206ENST00000597811 TWISTNBQ3B726 338 aaPredicted RBP19.86■□□□□ 0.77
XRCC1-206ENST00000597811 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
XRCC1-206ENST00000597811 CCDC30Q5VVM6 783 aa19.86■□□□□ 0.77
XRCC1-206ENST00000597811 C16orf71Q8IYS4 520 aaPredicted RBP19.86■□□□□ 0.77
XRCC1-206ENST00000597811 RBM46Q8TBY0 533 aaKnown RBP19.86■□□□□ 0.77
XRCC1-206ENST00000597811 UTP14AQ9BVJ6 771 aaKnown RBP19.86■□□□□ 0.77
XRCC1-206ENST00000597811 TAF1P21675 1872 aa19.86■□□□□ 0.77
XRCC1-206ENST00000597811 HOXA10P31260 410 aaPredicted RBP19.85■□□□□ 0.77
XRCC1-206ENST00000597811 NLRP10Q86W26 655 aa19.85■□□□□ 0.77
XRCC1-206ENST00000597811 RPGRQ92834 1020 aaKnown RBP19.85■□□□□ 0.77
XRCC1-206ENST00000597811 STK31Q9BXU1 1019 aa19.85■□□□□ 0.77
XRCC1-206ENST00000597811 HYPKQ9NX55 129 aa19.85■□□□□ 0.77
XRCC1-206ENST00000597811 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
XRCC1-206ENST00000597811 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
XRCC1-206ENST00000597811 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
XRCC1-206ENST00000597811 TCIRG1Q13488 830 aa19.84■□□□□ 0.77
XRCC1-206ENST00000597811 RNF123Q5XPI4 1314 aa19.83■□□□□ 0.77
XRCC1-206ENST00000597811 SLC10A5Q5PT55 438 aa19.83■□□□□ 0.77
XRCC1-206ENST00000597811 SLC51AQ86UW1 340 aa19.83■□□□□ 0.77
XRCC1-206ENST00000597811 RTKN2Q8IZC4 609 aa19.83■□□□□ 0.77
XRCC1-206ENST00000597811 PLBD2Q8NHP8 589 aa19.83■□□□□ 0.77
XRCC1-206ENST00000597811 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
XRCC1-206ENST00000597811 ZNF277Q9NRM2 450 aaPredicted RBP19.83■□□□□ 0.77
XRCC1-206ENST00000597811 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
XRCC1-206ENST00000597811 ANKRD13DQ6ZTN6 518 aa19.82■□□□□ 0.76
XRCC1-206ENST00000597811 SYNE4Q8N205 404 aa19.82■□□□□ 0.76
XRCC1-206ENST00000597811 ZNF428Q96B54 188 aa19.82■□□□□ 0.76
XRCC1-206ENST00000597811 RBM17Q96I25 401 aaKnown RBP19.82■□□□□ 0.76
XRCC1-206ENST00000597811 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
XRCC1-206ENST00000597811 POTECB2RU33 542 aa19.81■□□□□ 0.76
XRCC1-206ENST00000597811 VEGFAP15692 232 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-206ENST00000597811 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
XRCC1-206ENST00000597811 HCLS1P14317 486 aaPredicted RBP19.8■□□□□ 0.76
XRCC1-206ENST00000597811 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
XRCC1-206ENST00000597811 PHAXQ9H814 394 aaKnown RBP19.8■□□□□ 0.76
XRCC1-206ENST00000597811 TRMT112Q9UI30 125 aaKnown RBP19.8■□□□□ 0.76
XRCC1-206ENST00000597811 SCN4AP35499 1836 aa19.8■□□□□ 0.76
XRCC1-206ENST00000597811 E9PSI1 815 aa19.79■□□□□ 0.76
XRCC1-206ENST00000597811 PPEF1O14829 653 aaPredicted RBP19.79■□□□□ 0.76
XRCC1-206ENST00000597811 DDNO94850 711 aaPredicted RBP19.79■□□□□ 0.76
XRCC1-206ENST00000597811 FSTL1Q12841 308 aa19.79■□□□□ 0.76
XRCC1-206ENST00000597811 ISCA1Q9BUE6 129 aa19.79■□□□□ 0.76
XRCC1-206ENST00000597811 ABCC4O15439 1325 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 SH3TC1Q8TE82 1336 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 ZNF521Q96K83 1311 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 COL4A5P29400 1685 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 PCNTO95613 3336 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 ATP5J2-PTCD1G3V325 749 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 IARSP41252 1262 aaKnown RBP19.78■□□□□ 0.76
XRCC1-206ENST00000597811 APLP1P51693 650 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 CC2D2BQ6DHV5 1058 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 PSMD1Q99460 953 aa19.78■□□□□ 0.76
XRCC1-206ENST00000597811 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
XRCC1-206ENST00000597811 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
XRCC1-206ENST00000597811 HNRNPUQ00839 825 aaKnown RBP eCLIP19.77■□□□□ 0.76
XRCC1-206ENST00000597811 ZNF541Q9H0D2 1346 aa19.76■□□□□ 0.75
XRCC1-206ENST00000597811 VAMP4O75379 141 aa19.76■□□□□ 0.75
XRCC1-206ENST00000597811 SMC1BQ8NDV3 1235 aa19.76■□□□□ 0.75
XRCC1-206ENST00000597811 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
XRCC1-206ENST00000597811 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
XRCC1-206ENST00000597811 LRRC37AA6NMS7 1700 aa19.75■□□□□ 0.75
XRCC1-206ENST00000597811 CACNA1FO60840 1977 aa19.75■□□□□ 0.75
XRCC1-206ENST00000597811 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
XRCC1-206ENST00000597811 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
XRCC1-206ENST00000597811 COL4A1P02462 1669 aa19.74■□□□□ 0.75
XRCC1-206ENST00000597811 FZD9O00144 591 aa19.73■□□□□ 0.75
XRCC1-206ENST00000597811 TRIM28Q13263 835 aaKnown RBP19.73■□□□□ 0.75
XRCC1-206ENST00000597811 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
XRCC1-206ENST00000597811 L3MBTL3Q96JM7 780 aaPredicted RBP19.73■□□□□ 0.75
XRCC1-206ENST00000597811 HTRA3P83110 453 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms