RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
USHBP1-206ENST00000596436 HACL1Q9UJ83 578 aa20.92■□□□□ 0.94
USHBP1-206ENST00000596436 UBN2Q6ZU65 1347 aa20.92■□□□□ 0.94
USHBP1-206ENST00000596436 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
USHBP1-206ENST00000596436 CC2D2BQ6DHV5 1058 aa20.91■□□□□ 0.94
USHBP1-206ENST00000596436 TTLL7Q6ZT98 887 aa20.91■□□□□ 0.94
USHBP1-206ENST00000596436 GPC2Q8N158 579 aa20.91■□□□□ 0.94
USHBP1-206ENST00000596436 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
USHBP1-206ENST00000596436 ERBB4Q15303 1308 aa20.9■□□□□ 0.94
USHBP1-206ENST00000596436 NUTM1Q86Y26 1132 aa20.9■□□□□ 0.94
USHBP1-206ENST00000596436 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
USHBP1-206ENST00000596436 LTBP1Q14766 1721 aa20.9■□□□□ 0.94
USHBP1-206ENST00000596436 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
USHBP1-206ENST00000596436 EPHX2P34913 555 aa20.89■□□□□ 0.93
USHBP1-206ENST00000596436 PNMA8AQ86V59 439 aaPredicted RBP20.89■□□□□ 0.93
USHBP1-206ENST00000596436 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.93
USHBP1-206ENST00000596436 RNF123Q5XPI4 1314 aa20.88■□□□□ 0.93
USHBP1-206ENST00000596436 TMEM88BA6NKF7 163 aa20.88■□□□□ 0.93
USHBP1-206ENST00000596436 RIPK4P57078 832 aa20.88■□□□□ 0.93
USHBP1-206ENST00000596436 KIF6Q6ZMV9 814 aa20.88■□□□□ 0.93
USHBP1-206ENST00000596436 LRP10Q7Z4F1 713 aa20.88■□□□□ 0.93
USHBP1-206ENST00000596436 NTSR2O95665 410 aa20.87■□□□□ 0.93
USHBP1-206ENST00000596436 GRIPAP1Q4V328 841 aa20.87■□□□□ 0.93
USHBP1-206ENST00000596436 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
USHBP1-206ENST00000596436 NGEFQ8N5V2 710 aa20.87■□□□□ 0.93
USHBP1-206ENST00000596436 EAPPQ56P03 285 aaPredicted RBP20.86■□□□□ 0.93
USHBP1-206ENST00000596436 GIGYF2Q6Y7W6 1299 aaKnown RBP20.86■□□□□ 0.93
USHBP1-206ENST00000596436 CRAMP1Q96RY5 1269 aa20.86■□□□□ 0.93
USHBP1-206ENST00000596436 FOXN1O15353 648 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 CAPN15O75808 1086 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 MYL6BP14649 208 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 GPTP24298 496 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 VEGFBP49765 207 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 NEUROD2Q15784 382 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
USHBP1-206ENST00000596436 ZBTB3Q9H5J0 574 aa20.85■□□□□ 0.93
USHBP1-206ENST00000596436 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
USHBP1-206ENST00000596436 PDIA6Q15084 440 aa20.84■□□□□ 0.93
USHBP1-206ENST00000596436 CNTROBQ8N137 903 aa20.84■□□□□ 0.93
USHBP1-206ENST00000596436 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
USHBP1-206ENST00000596436 TRIM35Q9UPQ4 493 aa20.84■□□□□ 0.93
USHBP1-206ENST00000596436 THSD7BQ9C0I4 1608 aa20.83■□□□□ 0.93
USHBP1-206ENST00000596436 ANKRD36CQ5JPF3 1778 aa20.83■□□□□ 0.93
USHBP1-206ENST00000596436 APAF1O14727 1248 aa20.83■□□□□ 0.93
USHBP1-206ENST00000596436 C3orf67Q6ZVT6 689 aa20.83■□□□□ 0.93
USHBP1-206ENST00000596436 SCNN1DP51172 638 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 PARP10Q53GL7 1025 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 MAP1SQ66K74 1059 aaPredicted RBP20.82■□□□□ 0.92
USHBP1-206ENST00000596436 SLC51AQ86UW1 340 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 BABAM1Q9NWV8 329 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 CLEC11AQ9Y240 323 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 LAMB2P55268 1798 aa20.82■□□□□ 0.92
USHBP1-206ENST00000596436 PPEF1O14829 653 aaPredicted RBP20.81■□□□□ 0.92
USHBP1-206ENST00000596436 EIF6P56537 245 aaKnown RBP20.81■□□□□ 0.92
USHBP1-206ENST00000596436 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
USHBP1-206ENST00000596436 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
USHBP1-206ENST00000596436 WBP1LQ9NX94 342 aa20.81■□□□□ 0.92
USHBP1-206ENST00000596436 PPP1R42Q7Z4L9 355 aa20.8■□□□□ 0.92
USHBP1-206ENST00000596436 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
USHBP1-206ENST00000596436 VPS33BQ9H267 617 aa20.79■□□□□ 0.92
USHBP1-206ENST00000596436 TSPYL4Q9UJ04 414 aa20.79■□□□□ 0.92
USHBP1-206ENST00000596436 CTCFP49711 727 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-206ENST00000596436 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
USHBP1-206ENST00000596436 GJA3Q9Y6H8 435 aa20.78■□□□□ 0.92
USHBP1-206ENST00000596436 EPS15P42566 896 aa20.77■□□□□ 0.92
USHBP1-206ENST00000596436 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
USHBP1-206ENST00000596436 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
USHBP1-206ENST00000596436 DIEXFQ68CQ4 756 aaKnown RBP20.77■□□□□ 0.92
USHBP1-206ENST00000596436 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
USHBP1-206ENST00000596436 RTFDC1Q9BY42 306 aaPredicted RBP20.77■□□□□ 0.92
USHBP1-206ENST00000596436 DDX21Q9NR30 783 aaKnown RBP eCLIP20.77■□□□□ 0.92
USHBP1-206ENST00000596436 TRPM7Q96QT4 1865 aa20.77■□□□□ 0.92
USHBP1-206ENST00000596436 LMOD1P29536 600 aaPredicted RBP20.76■□□□□ 0.91
USHBP1-206ENST00000596436 USP50Q70EL3 339 aaPredicted RBP20.76■□□□□ 0.91
USHBP1-206ENST00000596436 FAM9BQ8IZU0 186 aa20.76■□□□□ 0.91
USHBP1-206ENST00000596436 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
USHBP1-206ENST00000596436 ABCC4O15439 1325 aa20.76■□□□□ 0.91
USHBP1-206ENST00000596436 AIDAQ96BJ3 306 aa20.75■□□□□ 0.91
USHBP1-206ENST00000596436 LRRC37AA6NMS7 1700 aa20.75■□□□□ 0.91
USHBP1-206ENST00000596436 NIM1KQ8IY84 436 aa20.74■□□□□ 0.91
USHBP1-206ENST00000596436 WDR33Q9C0J8 1336 aaKnown RBP20.74■□□□□ 0.91
USHBP1-206ENST00000596436 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
USHBP1-206ENST00000596436 PPIP5K2O43314 1243 aa20.73■□□□□ 0.91
USHBP1-206ENST00000596436 ANXA1P04083 346 aa20.73■□□□□ 0.91
USHBP1-206ENST00000596436 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
USHBP1-206ENST00000596436 NLRP10Q86W26 655 aa20.73■□□□□ 0.91
USHBP1-206ENST00000596436 GPRC5DQ9NZD1 345 aa20.73■□□□□ 0.91
USHBP1-206ENST00000596436 CCER2I3L3R5 266 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
USHBP1-206ENST00000596436 BBOX1O75936 387 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 AOC3Q16853 763 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 HSP90AB3PQ58FF7 597 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 ZNRF3Q9ULT6 936 aa20.72■□□□□ 0.91
USHBP1-206ENST00000596436 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
USHBP1-206ENST00000596436 CHL1O00533 1208 aa20.71■□□□□ 0.91
USHBP1-206ENST00000596436 HSPA8P11142 646 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms