RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
ZNF558-202ENST00000593891 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
ZNF558-202ENST00000593891 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
ZNF558-202ENST00000593891 NBPF5PQ86XG9 351 aaPredicted RBP16.45■□□□□ 0.22
ZNF558-202ENST00000593891 BCORQ6W2J9 1755 aa16.45■□□□□ 0.22
ZNF558-202ENST00000593891 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
ZNF558-202ENST00000593891 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
ZNF558-202ENST00000593891 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
ZNF558-202ENST00000593891 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
ZNF558-202ENST00000593891 CDHR2Q9BYE9 1310 aa16.44■□□□□ 0.22
ZNF558-202ENST00000593891 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
ZNF558-202ENST00000593891 CEP290O15078 2479 aa16.43■□□□□ 0.22
ZNF558-202ENST00000593891 DLK2Q6UY11 383 aa16.43■□□□□ 0.22
ZNF558-202ENST00000593891 KRT26Q7Z3Y9 468 aa16.43■□□□□ 0.22
ZNF558-202ENST00000593891 CACNA1SQ13698 1873 aa16.43■□□□□ 0.22
ZNF558-202ENST00000593891 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
ZNF558-202ENST00000593891 NPC1L1Q9UHC9 1359 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 COL6A3P12111 3177 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 COL4A5P29400 1685 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 H7C1D1 291 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 CXCL9Q07325 125 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 TRPM4Q8TD43 1214 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 PRDM6Q9NQX0 595 aa16.41■□□□□ 0.22
ZNF558-202ENST00000593891 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 SLC39A6Q13433 755 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 RASAL3Q86YV0 1011 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 CARD11Q9BXL7 1154 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 TRIM17Q9Y577 477 aa16.4■□□□□ 0.22
ZNF558-202ENST00000593891 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
ZNF558-202ENST00000593891 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
ZNF558-202ENST00000593891 TNIP1Q15025 636 aa16.38■□□□□ 0.21
ZNF558-202ENST00000593891 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
ZNF558-202ENST00000593891 DCPSQ96C86 337 aaKnown RBP16.38■□□□□ 0.21
ZNF558-202ENST00000593891 CNOT7Q9UIV1 285 aaKnown RBP16.38■□□□□ 0.21
ZNF558-202ENST00000593891 SNED1Q8TER0 1413 aa16.37■□□□□ 0.21
ZNF558-202ENST00000593891 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
ZNF558-202ENST00000593891 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
ZNF558-202ENST00000593891 VPS33BQ9H267 617 aa16.37■□□□□ 0.21
ZNF558-202ENST00000593891 MPNDQ8N594 471 aa16.36■□□□□ 0.21
ZNF558-202ENST00000593891 ADM5C9JUS6 153 aa16.35■□□□□ 0.21
ZNF558-202ENST00000593891 TM4SF4P48230 202 aa16.35■□□□□ 0.21
ZNF558-202ENST00000593891 AOC3Q16853 763 aa16.35■□□□□ 0.21
ZNF558-202ENST00000593891 ARMC5Q96C12 935 aa16.35■□□□□ 0.21
ZNF558-202ENST00000593891 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
ZNF558-202ENST00000593891 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
ZNF558-202ENST00000593891 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
ZNF558-202ENST00000593891 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
ZNF558-202ENST00000593891 CFHR5Q9BXR6 569 aa16.34■□□□□ 0.21
ZNF558-202ENST00000593891 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
ZNF558-202ENST00000593891 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
ZNF558-202ENST00000593891 MICALL2Q8IY33 904 aa16.33■□□□□ 0.2
ZNF558-202ENST00000593891 DPF3Q92784 378 aa16.33■□□□□ 0.2
ZNF558-202ENST00000593891 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
ZNF558-202ENST00000593891 STXBP5LQ9Y2K9 1186 aa16.33■□□□□ 0.2
ZNF558-202ENST00000593891 PTPN22Q9Y2R2 807 aa16.33■□□□□ 0.2
ZNF558-202ENST00000593891 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
ZNF558-202ENST00000593891 FKBP1BP68106 108 aa16.32■□□□□ 0.2
ZNF558-202ENST00000593891 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
ZNF558-202ENST00000593891 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
ZNF558-202ENST00000593891 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
ZNF558-202ENST00000593891 ANKRD26Q9UPS8 1709 aa16.32■□□□□ 0.2
ZNF558-202ENST00000593891 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
ZNF558-202ENST00000593891 PAPPA2Q9BXP8 1791 aa16.31■□□□□ 0.2
ZNF558-202ENST00000593891 RAD17O75943 681 aa16.31■□□□□ 0.2
ZNF558-202ENST00000593891 SREBF2Q12772 1141 aa16.31■□□□□ 0.2
ZNF558-202ENST00000593891 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
ZNF558-202ENST00000593891 TTC5Q8N0Z6 440 aa16.31■□□□□ 0.2
ZNF558-202ENST00000593891 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
ZNF558-202ENST00000593891 RANBP2P49792 3224 aaKnown RBP16.3■□□□□ 0.2
ZNF558-202ENST00000593891 SHTN1A0MZ66 631 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 COL9A1P20849 921 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 SLC4A8Q2Y0W8 1093 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 RPGRQ92834 1020 aaKnown RBP16.3■□□□□ 0.2
ZNF558-202ENST00000593891 LRCH3Q96II8 777 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 PRO3102Q9H379 93 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 LGR6Q9HBX8 967 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
ZNF558-202ENST00000593891 FAM177BA6PVY3 158 aa16.29■□□□□ 0.2
ZNF558-202ENST00000593891 SOX1O00570 391 aaPredicted RBP16.29■□□□□ 0.2
ZNF558-202ENST00000593891 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
ZNF558-202ENST00000593891 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
ZNF558-202ENST00000593891 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
ZNF558-202ENST00000593891 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
ZNF558-202ENST00000593891 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
ZNF558-202ENST00000593891 TNNT2P45379 298 aaPredicted RBP16.28■□□□□ 0.2
ZNF558-202ENST00000593891 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
ZNF558-202ENST00000593891 DPF2Q92785 391 aa16.28■□□□□ 0.2
ZNF558-202ENST00000593891 CDCA5Q96FF9 252 aa16.28■□□□□ 0.2
ZNF558-202ENST00000593891 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
ZNF558-202ENST00000593891 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
ZNF558-202ENST00000593891 GPR153Q6NV75 609 aa16.27■□□□□ 0.2
ZNF558-202ENST00000593891 NBPF11Q86T75 865 aa16.27■□□□□ 0.2
ZNF558-202ENST00000593891 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
ZNF558-202ENST00000593891 RBBP6Q7Z6E9 1792 aaKnown RBP16.27■□□□□ 0.2
ZNF558-202ENST00000593891 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
ZNF558-202ENST00000593891 A1BGP04217 495 aa16.26■□□□□ 0.19
ZNF558-202ENST00000593891 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms