RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 RBM17Q96I25 401 aaKnown RBP23.43■■□□□ 1.34
CIRBP-243ENST00000593128 IBTKQ9P2D0 1353 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-243ENST00000593128 PARP10Q53GL7 1025 aa23.42■■□□□ 1.34
CIRBP-243ENST00000593128 COPS6Q7L5N1 327 aa23.42■■□□□ 1.34
CIRBP-243ENST00000593128 XAGE3Q8WTP9 111 aa23.42■■□□□ 1.34
CIRBP-243ENST00000593128 ZNF428Q96B54 188 aa23.42■■□□□ 1.34
CIRBP-243ENST00000593128 TRIM35Q9UPQ4 493 aa23.42■■□□□ 1.34
CIRBP-243ENST00000593128 POTEIP0CG38 1075 aa23.41■■□□□ 1.34
CIRBP-243ENST00000593128 POTEJP0CG39 1038 aa23.41■■□□□ 1.34
CIRBP-243ENST00000593128 C3orf67Q6ZVT6 689 aa23.41■■□□□ 1.34
CIRBP-243ENST00000593128 LRP10Q7Z4F1 713 aa23.41■■□□□ 1.34
CIRBP-243ENST00000593128 UTP14AQ9BVJ6 771 aaKnown RBP23.41■■□□□ 1.34
CIRBP-243ENST00000593128 ANKRD36CQ5JPF3 1778 aa23.41■■□□□ 1.34
CIRBP-243ENST00000593128 IQCA1LA6NCM1 817 aa23.4■■□□□ 1.34
CIRBP-243ENST00000593128 PPEF1O14829 653 aaPredicted RBP23.4■■□□□ 1.34
CIRBP-243ENST00000593128 CHADLQ6NUI6 762 aa23.4■■□□□ 1.34
CIRBP-243ENST00000593128 NLRP3Q96P20 1036 aa23.4■■□□□ 1.34
CIRBP-243ENST00000593128 CHL1O00533 1208 aa23.39■■□□□ 1.33
CIRBP-243ENST00000593128 EAPPQ56P03 285 aaPredicted RBP23.39■■□□□ 1.33
CIRBP-243ENST00000593128 IFFO2Q5TF58 517 aa23.39■■□□□ 1.33
CIRBP-243ENST00000593128 SLC51AQ86UW1 340 aa23.39■■□□□ 1.33
CIRBP-243ENST00000593128 HOXA10P31260 410 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-243ENST00000593128 HDGFL1Q5TGJ6 251 aa23.38■■□□□ 1.33
CIRBP-243ENST00000593128 JDP2Q8WYK2 163 aa23.38■■□□□ 1.33
CIRBP-243ENST00000593128 TMX4Q9H1E5 349 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-243ENST00000593128 PRKRIP1Q9H875 184 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-243ENST00000593128 CHPF2Q9P2E5 772 aa23.38■■□□□ 1.33
CIRBP-243ENST00000593128 RIC1Q4ADV7 1423 aa23.38■■□□□ 1.33
CIRBP-243ENST00000593128 SCN4AP35499 1836 aa23.38■■□□□ 1.33
CIRBP-243ENST00000593128 HSP90AB3PQ58FF7 597 aa23.37■■□□□ 1.33
CIRBP-243ENST00000593128 CRAMP1Q96RY5 1269 aa23.37■■□□□ 1.33
CIRBP-243ENST00000593128 TAF1DQ9H5J8 278 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-243ENST00000593128 DDX21Q9NR30 783 aaKnown RBP eCLIP23.37■■□□□ 1.33
CIRBP-243ENST00000593128 CLEC11AQ9Y240 323 aa23.37■■□□□ 1.33
CIRBP-243ENST00000593128 CC2D2BQ6DHV5 1058 aa23.36■■□□□ 1.33
CIRBP-243ENST00000593128 PSMD1Q99460 953 aa23.36■■□□□ 1.33
CIRBP-243ENST00000593128 GJA3Q9Y6H8 435 aa23.36■■□□□ 1.33
CIRBP-243ENST00000593128 HCLS1P14317 486 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-243ENST00000593128 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
CIRBP-243ENST00000593128 LARGE2Q8N3Y3 721 aa23.35■■□□□ 1.33
CIRBP-243ENST00000593128 L3MBTL3Q96JM7 780 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-243ENST00000593128 TRMT112Q9UI30 125 aaKnown RBP23.35■■□□□ 1.33
CIRBP-243ENST00000593128 HACL1Q9UJ83 578 aa23.35■■□□□ 1.33
CIRBP-243ENST00000593128 LAMB2P55268 1798 aa23.35■■□□□ 1.33
CIRBP-243ENST00000593128 RNF123Q5XPI4 1314 aa23.34■■□□□ 1.33
CIRBP-243ENST00000593128 EIF6P56537 245 aaKnown RBP23.34■■□□□ 1.33
CIRBP-243ENST00000593128 FZD9O00144 591 aa23.33■■□□□ 1.33
CIRBP-243ENST00000593128 TCIRG1Q13488 830 aa23.33■■□□□ 1.33
CIRBP-243ENST00000593128 LDHDQ86WU2 507 aa23.33■■□□□ 1.33
CIRBP-243ENST00000593128 JMYQ8N9B5 988 aa23.33■■□□□ 1.33
CIRBP-243ENST00000593128 ABCC4O15439 1325 aa23.33■■□□□ 1.32
CIRBP-243ENST00000593128 APAF1O14727 1248 aa23.32■■□□□ 1.32
CIRBP-243ENST00000593128 EPHX2P34913 555 aa23.32■■□□□ 1.32
CIRBP-243ENST00000593128 DUSP27Q5VZP5 1158 aa23.32■■□□□ 1.32
CIRBP-243ENST00000593128 SNED1Q8TER0 1413 aa23.32■■□□□ 1.32
CIRBP-243ENST00000593128 SLC10A5Q5PT55 438 aa23.31■■□□□ 1.32
CIRBP-243ENST00000593128 CFAP44Q96MT7 982 aa23.31■■□□□ 1.32
CIRBP-243ENST00000593128 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
CIRBP-243ENST00000593128 COL4A5P29400 1685 aa23.31■■□□□ 1.32
CIRBP-243ENST00000593128 PPIP5K2O43314 1243 aa23.3■■□□□ 1.32
CIRBP-243ENST00000593128 GRIPAP1Q4V328 841 aa23.3■■□□□ 1.32
CIRBP-243ENST00000593128 NIM1KQ8IY84 436 aa23.3■■□□□ 1.32
CIRBP-243ENST00000593128 GPC2Q8N158 579 aa23.3■■□□□ 1.32
CIRBP-243ENST00000593128 DBF4Q9UBU7 674 aaPredicted RBP23.3■■□□□ 1.32
CIRBP-243ENST00000593128 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
CIRBP-243ENST00000593128 SH3TC1Q8TE82 1336 aa23.3■■□□□ 1.32
CIRBP-243ENST00000593128 ATP5J2-PTCD1G3V325 749 aa23.29■■□□□ 1.32
CIRBP-243ENST00000593128 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-243ENST00000593128 AOC3Q16853 763 aa23.29■■□□□ 1.32
CIRBP-243ENST00000593128 DDX46Q7L014 1031 aaKnown RBP23.29■■□□□ 1.32
CIRBP-243ENST00000593128 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
CIRBP-243ENST00000593128 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
CIRBP-243ENST00000593128 TAF1P21675 1872 aa23.28■■□□□ 1.32
CIRBP-243ENST00000593128 HOXB7P09629 217 aa23.28■■□□□ 1.32
CIRBP-243ENST00000593128 LMOD1P29536 600 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-243ENST00000593128 RTL5Q5HYW3 569 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-243ENST00000593128 ANKRD13DQ6ZTN6 518 aa23.28■■□□□ 1.32
CIRBP-243ENST00000593128 CREBZFQ9NS37 354 aa23.28■■□□□ 1.32
CIRBP-243ENST00000593128 DPP8Q6V1X1 898 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-243ENST00000593128 MAP1SQ66K74 1059 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-243ENST00000593128 PNMA8AQ86V59 439 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-243ENST00000593128 HYPKQ9NX55 129 aa23.26■■□□□ 1.31
CIRBP-243ENST00000593128 CALD1Q05682 793 aaKnown RBP23.25■■□□□ 1.31
CIRBP-243ENST00000593128 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
CIRBP-243ENST00000593128 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
CIRBP-243ENST00000593128 PCNTO95613 3336 aa23.25■■□□□ 1.31
CIRBP-243ENST00000593128 BBOX1O75936 387 aa23.24■■□□□ 1.31
CIRBP-243ENST00000593128 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
CIRBP-243ENST00000593128 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
CIRBP-243ENST00000593128 GNAI1P63096 354 aa23.24■■□□□ 1.31
CIRBP-243ENST00000593128 RIC3Q7Z5B4 369 aa23.24■■□□□ 1.31
CIRBP-243ENST00000593128 MPNDQ8N594 471 aa23.24■■□□□ 1.31
CIRBP-243ENST00000593128 SUPT20HQ8NEM7 779 aa23.24■■□□□ 1.31
CIRBP-243ENST00000593128 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
CIRBP-243ENST00000593128 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
CIRBP-243ENST00000593128 GRAPQ13588 217 aa23.23■■□□□ 1.31
CIRBP-243ENST00000593128 SP8Q8IXZ3 490 aa23.23■■□□□ 1.31
CIRBP-243ENST00000593128 GRAPLQ8TC17 118 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-243ENST00000593128 LTBP1Q14766 1721 aa23.22■■□□□ 1.31
CIRBP-243ENST00000593128 CNTROBQ8N137 903 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms