RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
TPM4-216ENST00000592822 ABCC12Q96J65 1359 aa12.67□□□□□ -0.38
TPM4-216ENST00000592822 NPHP1O15259 732 aa12.66□□□□□ -0.38
TPM4-216ENST00000592822 ST5P78524 1137 aa12.66□□□□□ -0.38
TPM4-216ENST00000592822 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
TPM4-216ENST00000592822 CCDC191Q8NCU4 936 aa12.66□□□□□ -0.38
TPM4-216ENST00000592822 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
TPM4-216ENST00000592822 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
TPM4-216ENST00000592822 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
TPM4-216ENST00000592822 A0A0G2JLW4 131 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 DPEP1P16444 411 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 KCNA3P22001 575 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
TPM4-216ENST00000592822 CHRNA5P30532 468 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 TGFB2P61812 414 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 NEXNQ0ZGT2 675 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 BEND3Q5T5X7 828 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
TPM4-216ENST00000592822 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
TPM4-216ENST00000592822 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
TPM4-216ENST00000592822 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
TPM4-216ENST00000592822 DLEC1Q9Y238 1755 aa12.64□□□□□ -0.39
TPM4-216ENST00000592822 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
TPM4-216ENST00000592822 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
TPM4-216ENST00000592822 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
TPM4-216ENST00000592822 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
TPM4-216ENST00000592822 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
TPM4-216ENST00000592822 LAMB2P55268 1798 aa12.64□□□□□ -0.39
TPM4-216ENST00000592822 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 KLRG2A4D1S0 409 aaPredicted RBP12.63□□□□□ -0.39
TPM4-216ENST00000592822 PDE6BP35913 854 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 GCKRQ14397 625 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 ZBTB38Q8NAP3 1195 aaPredicted RBP12.63□□□□□ -0.39
TPM4-216ENST00000592822 ARHGAP45Q92619 1136 aa12.63□□□□□ -0.39
TPM4-216ENST00000592822 JARID2Q92833 1246 aaPredicted RBP12.63□□□□□ -0.39
TPM4-216ENST00000592822 GOLGB1Q14789 3259 aaKnown RBP12.63□□□□□ -0.39
TPM4-216ENST00000592822 H0YIN7 160 aa12.62□□□□□ -0.39
TPM4-216ENST00000592822 PCCAP05165 728 aaPredicted RBP12.62□□□□□ -0.39
TPM4-216ENST00000592822 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
TPM4-216ENST00000592822 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
TPM4-216ENST00000592822 FRAT1Q92837 279 aaPredicted RBP12.62□□□□□ -0.39
TPM4-216ENST00000592822 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
TPM4-216ENST00000592822 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
TPM4-216ENST00000592822 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
TPM4-216ENST00000592822 H7C1W4 665 aa12.61□□□□□ -0.39
TPM4-216ENST00000592822 IRS4O14654 1257 aaPredicted RBP12.61□□□□□ -0.39
TPM4-216ENST00000592822 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
TPM4-216ENST00000592822 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
TPM4-216ENST00000592822 SRGNP10124 158 aa12.61□□□□□ -0.39
TPM4-216ENST00000592822 CRY2Q49AN0 593 aa12.61□□□□□ -0.39
TPM4-216ENST00000592822 SRCIN1Q9C0H9 1055 aa12.61□□□□□ -0.39
TPM4-216ENST00000592822 PDZRN3Q9UPQ7 1066 aa12.61□□□□□ -0.39
TPM4-216ENST00000592822 TRIM27P14373 513 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 CASP7P55210 303 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 ABCC4O15439 1325 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
TPM4-216ENST00000592822 YBX3P16989 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
TPM4-216ENST00000592822 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
TPM4-216ENST00000592822 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
TPM4-216ENST00000592822 UBE3BQ7Z3V4 1068 aa12.59□□□□□ -0.39
TPM4-216ENST00000592822 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
TPM4-216ENST00000592822 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
TPM4-216ENST00000592822 GRM8O00222 908 aa12.58□□□□□ -0.4
TPM4-216ENST00000592822 NPR1P16066 1061 aa12.58□□□□□ -0.4
TPM4-216ENST00000592822 CCT4P50991 539 aaKnown RBP12.58□□□□□ -0.4
TPM4-216ENST00000592822 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
TPM4-216ENST00000592822 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
TPM4-216ENST00000592822 ZNF622Q969S3 477 aaKnown RBP eCLIP12.58□□□□□ -0.4
TPM4-216ENST00000592822 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
TPM4-216ENST00000592822 MYH3P11055 1940 aa12.58□□□□□ -0.4
TPM4-216ENST00000592822 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
TPM4-216ENST00000592822 ARFGEF1Q9Y6D6 1849 aa12.58□□□□□ -0.4
TPM4-216ENST00000592822 TAF1P21675 1872 aa12.57□□□□□ -0.4
TPM4-216ENST00000592822 PDE8AO60658 829 aa12.57□□□□□ -0.4
TPM4-216ENST00000592822 HOXA10P31260 410 aaPredicted RBP12.57□□□□□ -0.4
TPM4-216ENST00000592822 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
TPM4-216ENST00000592822 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
TPM4-216ENST00000592822 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
TPM4-216ENST00000592822 RPGRQ92834 1020 aaKnown RBP12.57□□□□□ -0.4
TPM4-216ENST00000592822 USP44Q9H0E7 712 aa12.57□□□□□ -0.4
TPM4-216ENST00000592822 C9orf78Q9NZ63 289 aaPredicted RBP12.57□□□□□ -0.4
TPM4-216ENST00000592822 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
TPM4-216ENST00000592822 UTYO14607 1347 aa12.57□□□□□ -0.4
TPM4-216ENST00000592822 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
TPM4-216ENST00000592822 HSP90B1P14625 803 aaKnown RBP12.56□□□□□ -0.4
TPM4-216ENST00000592822 GPR162Q16538 588 aa12.56□□□□□ -0.4
TPM4-216ENST00000592822 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
TPM4-216ENST00000592822 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
TPM4-216ENST00000592822 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
TPM4-216ENST00000592822 COL4A1P02462 1669 aa12.55□□□□□ -0.4
TPM4-216ENST00000592822 PLIN1O60240 522 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms