RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
VMP1-214ENST00000592106 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
VMP1-214ENST00000592106 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
VMP1-214ENST00000592106 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
VMP1-214ENST00000592106 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
VMP1-214ENST00000592106 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
VMP1-214ENST00000592106 NUP98P52948 1817 aa13.29□□□□□ -0.28
VMP1-214ENST00000592106 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
VMP1-214ENST00000592106 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
VMP1-214ENST00000592106 CC2D2BQ6DHV5 1058 aa13.28□□□□□ -0.28
VMP1-214ENST00000592106 GIGYF2Q6Y7W6 1299 aaKnown RBP13.28□□□□□ -0.28
VMP1-214ENST00000592106 DNAJC5GQ8N7S2 189 aa13.28□□□□□ -0.28
VMP1-214ENST00000592106 ABCC12Q96J65 1359 aa13.28□□□□□ -0.28
VMP1-214ENST00000592106 GPTP24298 496 aa13.27□□□□□ -0.29
VMP1-214ENST00000592106 GRIPAP1Q4V328 841 aa13.27□□□□□ -0.29
VMP1-214ENST00000592106 TTLL7Q6ZT98 887 aa13.27□□□□□ -0.29
VMP1-214ENST00000592106 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
VMP1-214ENST00000592106 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
VMP1-214ENST00000592106 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
VMP1-214ENST00000592106 DDNO94850 711 aaPredicted RBP13.26□□□□□ -0.29
VMP1-214ENST00000592106 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
VMP1-214ENST00000592106 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
VMP1-214ENST00000592106 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
VMP1-214ENST00000592106 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
VMP1-214ENST00000592106 RNF123Q5XPI4 1314 aa13.26□□□□□ -0.29
VMP1-214ENST00000592106 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
VMP1-214ENST00000592106 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
VMP1-214ENST00000592106 CEP350Q5VT06 3117 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 UBN2Q6ZU65 1347 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 POTECB2RU33 542 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
VMP1-214ENST00000592106 HTRA3P83110 453 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
VMP1-214ENST00000592106 PSMD1Q99460 953 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
VMP1-214ENST00000592106 SCN4AP35499 1836 aa13.25□□□□□ -0.29
VMP1-214ENST00000592106 NTSR2O95665 410 aa13.24□□□□□ -0.29
VMP1-214ENST00000592106 SUSD4Q5VX71 490 aa13.24□□□□□ -0.29
VMP1-214ENST00000592106 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
VMP1-214ENST00000592106 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
VMP1-214ENST00000592106 PPEF1O14829 653 aaPredicted RBP13.23□□□□□ -0.29
VMP1-214ENST00000592106 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
VMP1-214ENST00000592106 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 LDHDQ86WU2 507 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 SYNE4Q8N205 404 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
VMP1-214ENST00000592106 HACL1Q9UJ83 578 aa13.23□□□□□ -0.29
VMP1-214ENST00000592106 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
VMP1-214ENST00000592106 ZNF541Q9H0D2 1346 aa13.22□□□□□ -0.29
VMP1-214ENST00000592106 HOXB7P09629 217 aa13.22□□□□□ -0.29
VMP1-214ENST00000592106 EIF6P56537 245 aaKnown RBP13.22□□□□□ -0.29
VMP1-214ENST00000592106 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
VMP1-214ENST00000592106 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
VMP1-214ENST00000592106 FZD9O00144 591 aa13.21□□□□□ -0.29
VMP1-214ENST00000592106 PDIA6Q15084 440 aa13.21□□□□□ -0.29
VMP1-214ENST00000592106 EAPPQ56P03 285 aaPredicted RBP13.21□□□□□ -0.29
VMP1-214ENST00000592106 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
VMP1-214ENST00000592106 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.29
VMP1-214ENST00000592106 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
VMP1-214ENST00000592106 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
VMP1-214ENST00000592106 LMOD1P29536 600 aaPredicted RBP13.2□□□□□ -0.3
VMP1-214ENST00000592106 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
VMP1-214ENST00000592106 AIMP1Q12904 312 aaKnown RBP13.2□□□□□ -0.3
VMP1-214ENST00000592106 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 LRP10Q7Z4F1 713 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 GPC2Q8N158 579 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 SUPT20HQ8NEM7 779 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 SNED1Q8TER0 1413 aa13.2□□□□□ -0.3
VMP1-214ENST00000592106 CHL1O00533 1208 aa13.19□□□□□ -0.3
VMP1-214ENST00000592106 ANXA1P04083 346 aa13.19□□□□□ -0.3
VMP1-214ENST00000592106 EPHX2P34913 555 aa13.19□□□□□ -0.3
VMP1-214ENST00000592106 CALD1Q05682 793 aaKnown RBP13.19□□□□□ -0.3
VMP1-214ENST00000592106 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
VMP1-214ENST00000592106 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
VMP1-214ENST00000592106 NIM1KQ8IY84 436 aa13.19□□□□□ -0.3
VMP1-214ENST00000592106 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
VMP1-214ENST00000592106 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
VMP1-214ENST00000592106 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
VMP1-214ENST00000592106 TCIRG1Q13488 830 aa13.18□□□□□ -0.3
VMP1-214ENST00000592106 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
VMP1-214ENST00000592106 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
VMP1-214ENST00000592106 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
VMP1-214ENST00000592106 ABCC4O15439 1325 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
VMP1-214ENST00000592106 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 HSPA1AP0DMV8 641 aaKnown RBP13.17□□□□□ -0.3
VMP1-214ENST00000592106 HSPA1BP0DMV9 641 aaKnown RBP13.17□□□□□ -0.3
VMP1-214ENST00000592106 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
VMP1-214ENST00000592106 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 CFAP44Q96MT7 982 aa13.17□□□□□ -0.3
VMP1-214ENST00000592106 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
VMP1-214ENST00000592106 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms