RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-212ENST00000591107 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
NPC1-212ENST00000591107 HSPA1AP0DMV8 641 aaKnown RBP17.51■□□□□ 0.39
NPC1-212ENST00000591107 HSPA1BP0DMV9 641 aaKnown RBP17.51■□□□□ 0.39
NPC1-212ENST00000591107 EIF4A1P60842 406 aaKnown RBP17.51■□□□□ 0.39
NPC1-212ENST00000591107 TPTE2Q6XPS3 522 aa17.51■□□□□ 0.39
NPC1-212ENST00000591107 SNED1Q8TER0 1413 aa17.51■□□□□ 0.39
NPC1-212ENST00000591107 MKRN1Q9UHC7 482 aaKnown RBP17.51■□□□□ 0.39
NPC1-212ENST00000591107 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
NPC1-212ENST00000591107 ANXA1P04083 346 aa17.5■□□□□ 0.39
NPC1-212ENST00000591107 GTF2E1P29083 439 aaPredicted RBP17.5■□□□□ 0.39
NPC1-212ENST00000591107 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
NPC1-212ENST00000591107 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
NPC1-212ENST00000591107 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
NPC1-212ENST00000591107 C3orf67Q6ZVT6 689 aa17.5■□□□□ 0.39
NPC1-212ENST00000591107 MAP3K15Q6ZN16 1313 aa17.49■□□□□ 0.39
NPC1-212ENST00000591107 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
NPC1-212ENST00000591107 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
NPC1-212ENST00000591107 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 LTBP1Q14766 1721 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 NEFMP07197 916 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 EAPPQ56P03 285 aaPredicted RBP17.48■□□□□ 0.39
NPC1-212ENST00000591107 KIF6Q6ZMV9 814 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 SCN4AP35499 1836 aa17.48■□□□□ 0.39
NPC1-212ENST00000591107 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
NPC1-212ENST00000591107 SUSD4Q5VX71 490 aa17.47■□□□□ 0.39
NPC1-212ENST00000591107 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
NPC1-212ENST00000591107 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
NPC1-212ENST00000591107 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
NPC1-212ENST00000591107 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
NPC1-212ENST00000591107 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
NPC1-212ENST00000591107 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
NPC1-212ENST00000591107 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
NPC1-212ENST00000591107 PNISRQ8TF01 805 aaKnown RBP17.45■□□□□ 0.38
NPC1-212ENST00000591107 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
NPC1-212ENST00000591107 LAMB2P55268 1798 aa17.45■□□□□ 0.38
NPC1-212ENST00000591107 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
NPC1-212ENST00000591107 ANKRD36CQ5JPF3 1778 aa17.44■□□□□ 0.38
NPC1-212ENST00000591107 NTSR2O95665 410 aa17.44■□□□□ 0.38
NPC1-212ENST00000591107 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
NPC1-212ENST00000591107 RPGRQ92834 1020 aaKnown RBP17.44■□□□□ 0.38
NPC1-212ENST00000591107 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
NPC1-212ENST00000591107 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 ERVV-1B6SEH8 477 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 RGL2O15211 777 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
NPC1-212ENST00000591107 KRT24Q2M2I5 525 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 RTKN2Q8IZC4 609 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 TNS4Q8IZW8 715 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 NYXQ9GZU5 481 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
NPC1-212ENST00000591107 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
NPC1-212ENST00000591107 EPHX2P34913 555 aa17.42■□□□□ 0.38
NPC1-212ENST00000591107 MAP1SQ66K74 1059 aaPredicted RBP17.42■□□□□ 0.38
NPC1-212ENST00000591107 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
NPC1-212ENST00000591107 ZNF34Q8IZ26 560 aa17.42■□□□□ 0.38
NPC1-212ENST00000591107 SPDYE1Q8NFV5 336 aaPredicted RBP17.42■□□□□ 0.38
NPC1-212ENST00000591107 HACL1Q9UJ83 578 aa17.42■□□□□ 0.38
NPC1-212ENST00000591107 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
NPC1-212ENST00000591107 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
NPC1-212ENST00000591107 FZD9O00144 591 aa17.41■□□□□ 0.38
NPC1-212ENST00000591107 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
NPC1-212ENST00000591107 ALDH1B1P30837 517 aa17.41■□□□□ 0.38
NPC1-212ENST00000591107 RIPK4P57078 832 aa17.41■□□□□ 0.38
NPC1-212ENST00000591107 PDIA6Q15084 440 aa17.41■□□□□ 0.38
NPC1-212ENST00000591107 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
NPC1-212ENST00000591107 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
NPC1-212ENST00000591107 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
NPC1-212ENST00000591107 DIEXFQ68CQ4 756 aaKnown RBP17.4■□□□□ 0.38
NPC1-212ENST00000591107 GIGYF2Q6Y7W6 1299 aaKnown RBP17.4■□□□□ 0.38
NPC1-212ENST00000591107 TAF1P21675 1872 aa17.39■□□□□ 0.38
NPC1-212ENST00000591107 AIMP1Q12904 312 aaKnown RBP17.39■□□□□ 0.37
NPC1-212ENST00000591107 PSMD1Q99460 953 aa17.39■□□□□ 0.37
NPC1-212ENST00000591107 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
NPC1-212ENST00000591107 COL4A1P02462 1669 aa17.39■□□□□ 0.37
NPC1-212ENST00000591107 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
NPC1-212ENST00000591107 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
NPC1-212ENST00000591107 ABCC4O15439 1325 aa17.38■□□□□ 0.37
NPC1-212ENST00000591107 HOXA10P31260 410 aaPredicted RBP17.37■□□□□ 0.37
NPC1-212ENST00000591107 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
NPC1-212ENST00000591107 XAGE3Q8WTP9 111 aa17.37■□□□□ 0.37
NPC1-212ENST00000591107 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
NPC1-212ENST00000591107 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
NPC1-212ENST00000591107 ERBB4Q15303 1308 aa17.37■□□□□ 0.37
NPC1-212ENST00000591107 FOXN1O15353 648 aa17.36■□□□□ 0.37
NPC1-212ENST00000591107 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
NPC1-212ENST00000591107 VEGFBP49765 207 aa17.36■□□□□ 0.37
NPC1-212ENST00000591107 SCNN1DP51172 638 aa17.36■□□□□ 0.37
NPC1-212ENST00000591107 AOC3Q16853 763 aa17.36■□□□□ 0.37
NPC1-212ENST00000591107 GPC2Q8N158 579 aa17.36■□□□□ 0.37
NPC1-212ENST00000591107 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
NPC1-212ENST00000591107 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
NPC1-212ENST00000591107 TMEM88BA6NKF7 163 aa17.35■□□□□ 0.37
NPC1-212ENST00000591107 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
NPC1-212ENST00000591107 EPS15P42566 896 aa17.35■□□□□ 0.37
NPC1-212ENST00000591107 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
NPC1-212ENST00000591107 COPS6Q7L5N1 327 aa17.35■□□□□ 0.37
NPC1-212ENST00000591107 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms