RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NTSR2O95665 410 aa23.39■■□□□ 1.33
VAT1-208ENST00000590924 HOXA10P31260 410 aaPredicted RBP23.39■■□□□ 1.33
VAT1-208ENST00000590924 CCDC146Q8IYE0 955 aa23.39■■□□□ 1.33
VAT1-208ENST00000590924 JMYQ8N9B5 988 aa23.39■■□□□ 1.33
VAT1-208ENST00000590924 PARP10Q53GL7 1025 aa23.38■■□□□ 1.33
VAT1-208ENST00000590924 IFFO2Q5TF58 517 aa23.38■■□□□ 1.33
VAT1-208ENST00000590924 FAM9BQ8IZU0 186 aa23.38■■□□□ 1.33
VAT1-208ENST00000590924 RPGRQ92834 1020 aaKnown RBP23.38■■□□□ 1.33
VAT1-208ENST00000590924 L3MBTL3Q96JM7 780 aaPredicted RBP23.38■■□□□ 1.33
VAT1-208ENST00000590924 ZNF277Q9NRM2 450 aaPredicted RBP23.38■■□□□ 1.33
VAT1-208ENST00000590924 PROSER3Q2NL68 480 aa23.37■■□□□ 1.33
VAT1-208ENST00000590924 NCBP3Q53F19 620 aaKnown RBP23.37■■□□□ 1.33
VAT1-208ENST00000590924 CC2D2BQ6DHV5 1058 aa23.37■■□□□ 1.33
VAT1-208ENST00000590924 PPP1R42Q7Z4L9 355 aa23.37■■□□□ 1.33
VAT1-208ENST00000590924 IQCA1LA6NCM1 817 aa23.36■■□□□ 1.33
VAT1-208ENST00000590924 CHL1O00533 1208 aa23.36■■□□□ 1.33
VAT1-208ENST00000590924 IARSP41252 1262 aaKnown RBP23.36■■□□□ 1.33
VAT1-208ENST00000590924 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
VAT1-208ENST00000590924 PSMD1Q99460 953 aa23.36■■□□□ 1.33
VAT1-208ENST00000590924 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
VAT1-208ENST00000590924 ADAMTSL1Q8N6G6 1762 aa23.36■■□□□ 1.33
VAT1-208ENST00000590924 ANXA1P04083 346 aa23.35■■□□□ 1.33
VAT1-208ENST00000590924 CRAMP1Q96RY5 1269 aa23.35■■□□□ 1.33
VAT1-208ENST00000590924 ZNF541Q9H0D2 1346 aa23.34■■□□□ 1.33
VAT1-208ENST00000590924 GRIPAP1Q4V328 841 aa23.34■■□□□ 1.33
VAT1-208ENST00000590924 CHADLQ6NUI6 762 aa23.34■■□□□ 1.33
VAT1-208ENST00000590924 SYNE4Q8N205 404 aa23.34■■□□□ 1.33
VAT1-208ENST00000590924 TAF1P21675 1872 aa23.34■■□□□ 1.33
VAT1-208ENST00000590924 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.33
VAT1-208ENST00000590924 DDX60Q8IY21 1712 aaKnown RBP23.33■■□□□ 1.33
VAT1-208ENST00000590924 PCNTO95613 3336 aa23.33■■□□□ 1.33
VAT1-208ENST00000590924 APAF1O14727 1248 aa23.33■■□□□ 1.33
VAT1-208ENST00000590924 RBM17Q96I25 401 aaKnown RBP23.33■■□□□ 1.33
VAT1-208ENST00000590924 COL4A5P29400 1685 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 FZD9O00144 591 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 POTEIP0CG38 1075 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 POTEJP0CG39 1038 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 HSP90AB3PQ58FF7 597 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 COPS6Q7L5N1 327 aa23.32■■□□□ 1.32
VAT1-208ENST00000590924 UTP14AQ9BVJ6 771 aaKnown RBP23.32■■□□□ 1.32
VAT1-208ENST00000590924 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
VAT1-208ENST00000590924 SLC10A5Q5PT55 438 aa23.31■■□□□ 1.32
VAT1-208ENST00000590924 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
VAT1-208ENST00000590924 XAGE3Q8WTP9 111 aa23.31■■□□□ 1.32
VAT1-208ENST00000590924 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
VAT1-208ENST00000590924 NLRP3Q96P20 1036 aa23.31■■□□□ 1.32
VAT1-208ENST00000590924 TAF1DQ9H5J8 278 aaPredicted RBP23.31■■□□□ 1.32
VAT1-208ENST00000590924 PPEF1O14829 653 aaPredicted RBP23.3■■□□□ 1.32
VAT1-208ENST00000590924 HOXB7P09629 217 aa23.3■■□□□ 1.32
VAT1-208ENST00000590924 LDHDQ86WU2 507 aa23.3■■□□□ 1.32
VAT1-208ENST00000590924 LAS1LQ9Y4W2 734 aaKnown RBP23.3■■□□□ 1.32
VAT1-208ENST00000590924 AIMP1Q12904 312 aaKnown RBP23.29■■□□□ 1.32
VAT1-208ENST00000590924 NLRP10Q86W26 655 aa23.28■■□□□ 1.32
VAT1-208ENST00000590924 JDP2Q8WYK2 163 aa23.28■■□□□ 1.32
VAT1-208ENST00000590924 HACL1Q9UJ83 578 aa23.28■■□□□ 1.32
VAT1-208ENST00000590924 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
VAT1-208ENST00000590924 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
VAT1-208ENST00000590924 TCIRG1Q13488 830 aa23.27■■□□□ 1.32
VAT1-208ENST00000590924 CCDC27Q2M243 656 aa23.27■■□□□ 1.32
VAT1-208ENST00000590924 GPC2Q8N158 579 aa23.27■■□□□ 1.32
VAT1-208ENST00000590924 CFAP44Q96MT7 982 aa23.27■■□□□ 1.32
VAT1-208ENST00000590924 CHPF2Q9P2E5 772 aa23.27■■□□□ 1.32
VAT1-208ENST00000590924 HDGFL1Q5TGJ6 251 aa23.26■■□□□ 1.31
VAT1-208ENST00000590924 EPHX2P34913 555 aa23.25■■□□□ 1.31
VAT1-208ENST00000590924 CREBZFQ9NS37 354 aa23.25■■□□□ 1.31
VAT1-208ENST00000590924 ABCC4O15439 1325 aa23.25■■□□□ 1.31
VAT1-208ENST00000590924 SLC51AQ86UW1 340 aa23.24■■□□□ 1.31
VAT1-208ENST00000590924 DBF4Q9UBU7 674 aaPredicted RBP23.24■■□□□ 1.31
VAT1-208ENST00000590924 ATP6V0A2Q9Y487 856 aa23.24■■□□□ 1.31
VAT1-208ENST00000590924 SH3TC1Q8TE82 1336 aa23.24■■□□□ 1.31
VAT1-208ENST00000590924 PASKQ96RG2 1323 aa23.24■■□□□ 1.31
VAT1-208ENST00000590924 EIF6P56537 245 aaKnown RBP23.23■■□□□ 1.31
VAT1-208ENST00000590924 PNMA8AQ86V59 439 aaPredicted RBP23.23■■□□□ 1.31
VAT1-208ENST00000590924 LARGE2Q8N3Y3 721 aa23.23■■□□□ 1.31
VAT1-208ENST00000590924 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
VAT1-208ENST00000590924 TMX4Q9H1E5 349 aaPredicted RBP23.23■■□□□ 1.31
VAT1-208ENST00000590924 TRMT112Q9UI30 125 aaKnown RBP23.23■■□□□ 1.31
VAT1-208ENST00000590924 TRPM7Q96QT4 1865 aa23.23■■□□□ 1.31
VAT1-208ENST00000590924 TCERG1O14776 1098 aaKnown RBP23.22■■□□□ 1.31
VAT1-208ENST00000590924 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
VAT1-208ENST00000590924 EAPPQ56P03 285 aaPredicted RBP23.22■■□□□ 1.31
VAT1-208ENST00000590924 MBIPQ9NS73 344 aa23.22■■□□□ 1.31
VAT1-208ENST00000590924 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
VAT1-208ENST00000590924 HCLS1P14317 486 aaPredicted RBP23.21■■□□□ 1.31
VAT1-208ENST00000590924 DUSP27Q5VZP5 1158 aa23.21■■□□□ 1.31
VAT1-208ENST00000590924 VPS33BQ9H267 617 aa23.21■■□□□ 1.31
VAT1-208ENST00000590924 BBOX1O75936 387 aa23.2■■□□□ 1.3
VAT1-208ENST00000590924 ITGBL1O95965 494 aaPredicted RBP23.2■■□□□ 1.3
VAT1-208ENST00000590924 ANKRD13DQ6ZTN6 518 aa23.2■■□□□ 1.3
VAT1-208ENST00000590924 HYPKQ9NX55 129 aa23.2■■□□□ 1.3
VAT1-208ENST00000590924 PPIP5K2O43314 1243 aa23.19■■□□□ 1.3
VAT1-208ENST00000590924 NIM1KQ8IY84 436 aa23.19■■□□□ 1.3
VAT1-208ENST00000590924 SUPT20HQ8NEM7 779 aa23.19■■□□□ 1.3
VAT1-208ENST00000590924 ISCA1Q9BUE6 129 aa23.19■■□□□ 1.3
VAT1-208ENST00000590924 RTFDC1Q9BY42 306 aaPredicted RBP23.19■■□□□ 1.3
VAT1-208ENST00000590924 IFT57Q9NWB7 429 aa23.19■■□□□ 1.3
VAT1-208ENST00000590924 GJA3Q9Y6H8 435 aa23.19■■□□□ 1.3
VAT1-208ENST00000590924 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
VAT1-208ENST00000590924 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms