RNA–Protein interactions for RNA: ENST00000590873.5

FAM20A-204, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, human

TSL 3

Gene FAM20A, Length 804 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM20A-204	ENST00000590873	ZNF541	Q9H0D2	1346 aa		12.08	□□□□□ -0.48
FAM20A-204	ENST00000590873	KLRG2	A4D1S0	409 aa	Predicted RBP	12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	TMEM88B	A6NKF7	163 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	TCERG1	O14776	1098 aa	Known RBP	12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	LMOD1	P29536	600 aa	Predicted RBP	12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	CC2D2B	Q6DHV5	1058 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	PPP1R42	Q7Z4L9	355 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	PNMA8A	Q86V59	439 aa	Predicted RBP	12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	AIDA	Q96BJ3	306 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	RBM17	Q96I25	401 aa	Known RBP	12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	THUMPD2	Q9BTF0	503 aa	Known RBP	12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	TSPYL4	Q9UJ04	414 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	GJA3	Q9Y6H8	435 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	RNF123	Q5XPI4	1314 aa		12.07	□□□□□ -0.48
FAM20A-204	ENST00000590873	KDM3B	Q7LBC6	1761 aa		12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	EIF2S2	P20042	333 aa	Known RBP	12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	EIF4A1	P60842	406 aa	Known RBP	12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	TTLL7	Q6ZT98	887 aa		12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	LARGE2	Q8N3Y3	721 aa		12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	PSMD1	Q99460	953 aa		12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	NUP98	P52948	1817 aa		12.06	□□□□□ -0.48
FAM20A-204	ENST00000590873	GRIPAP1	Q4V328	841 aa		12.05	□□□□□ -0.48
FAM20A-204	ENST00000590873	GPC2	Q8N158	579 aa		12.05	□□□□□ -0.48
FAM20A-204	ENST00000590873	NLRP3	Q96P20	1036 aa		12.05	□□□□□ -0.48
FAM20A-204	ENST00000590873	CNTNAP1	P78357	1384 aa		12.05	□□□□□ -0.48
FAM20A-204	ENST00000590873	ABCC12	Q96J65	1359 aa		12.05	□□□□□ -0.48
FAM20A-204	ENST00000590873	FZD9	O00144	591 aa		12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	PPEF1	O14829	653 aa	Predicted RBP	12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	CRY2	Q49AN0	593 aa		12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	PARP10	Q53GL7	1025 aa		12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	SUSD4	Q5VX71	490 aa		12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	NIM1K	Q8IY84	436 aa		12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	PLEKHF1	Q96S99	279 aa		12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	ABT1	Q9ULW3	272 aa	Known RBP	12.04	□□□□□ -0.48
FAM20A-204	ENST00000590873	RIPK4	P57078	832 aa		12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	LMOD3	Q0VAK6	560 aa		12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	MAP1S	Q66K74	1059 aa	Predicted RBP	12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	CNTROB	Q8N137	903 aa		12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	ERBB4	Q15303	1308 aa		12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	UBN2	Q6ZU65	1347 aa		12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	PASK	Q96RG2	1323 aa		12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.03	□□□□□ -0.48
FAM20A-204	ENST00000590873	PPIP5K2	O43314	1243 aa		12.02	□□□□□ -0.49
FAM20A-204	ENST00000590873	DEFB115	Q30KQ5	88 aa		12.02	□□□□□ -0.49
FAM20A-204	ENST00000590873	NECTIN2	Q92692	538 aa		12.02	□□□□□ -0.49
FAM20A-204	ENST00000590873	CRAMP1	Q96RY5	1269 aa		12.02	□□□□□ -0.49
FAM20A-204	ENST00000590873	UTP14A	Q9BVJ6	771 aa	Known RBP	12.02	□□□□□ -0.49
FAM20A-204	ENST00000590873	NTSR2	O95665	410 aa		12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	ITGBL1	O95965	494 aa	Predicted RBP	12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	HOXA10	P31260	410 aa	Predicted RBP	12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	VEGFB	P49765	207 aa		12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	AIMP1	Q12904	312 aa	Known RBP	12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	NEUROD2	Q15784	382 aa		12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	ZNF34	Q8IZ26	560 aa		12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	SUPT20H	Q8NEM7	779 aa		12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	LAS1L	Q9Y4W2	734 aa	Known RBP	12.01	□□□□□ -0.49
FAM20A-204	ENST00000590873	FOXN1	O15353	648 aa		12	□□□□□ -0.49
FAM20A-204	ENST00000590873	CTCF	P49711	727 aa	Predicted RBP	12	□□□□□ -0.49
FAM20A-204	ENST00000590873	GRM1	Q13255	1194 aa		12	□□□□□ -0.49
FAM20A-204	ENST00000590873	HSP90AB3P	Q58FF7	597 aa		12	□□□□□ -0.49
FAM20A-204	ENST00000590873	RIC1	Q4ADV7	1423 aa		12	□□□□□ -0.49
FAM20A-204	ENST00000590873	ANXA1	P04083	346 aa		11.99	□□□□□ -0.49
FAM20A-204	ENST00000590873	RALBP1	Q15311	655 aa		11.99	□□□□□ -0.49
FAM20A-204	ENST00000590873	AOC3	Q16853	763 aa		11.99	□□□□□ -0.49
FAM20A-204	ENST00000590873	BEGAIN	Q9BUH8	593 aa		11.99	□□□□□ -0.49
FAM20A-204	ENST00000590873	EPS15	P42566	896 aa		11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	WDR43	Q15061	677 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	DPP8	Q6V1X1	898 aa	Predicted RBP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	USP50	Q70EL3	339 aa	Predicted RBP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	DDX46	Q7L014	1031 aa	Known RBP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	COPS6	Q7L5N1	327 aa		11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	BCL2L13	Q9BXK5	485 aa		11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	BABAM1	Q9NWV8	329 aa		11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	TRMT112	Q9UI30	125 aa	Known RBP	11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	ATP6V0A2	Q9Y487	856 aa		11.98	□□□□□ -0.49
FAM20A-204	ENST00000590873	PCNT	O95613	3336 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	ABCC4	O15439	1325 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	WDR33	Q9C0J8	1336 aa	Known RBP	11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	RASSF10	A6NK89	507 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	TMPO	P42166	694 aa	Known RBP	11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	MAP2K1	Q02750	393 aa	Predicted RBP	11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	C3orf67	Q6ZVT6	689 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	MPND	Q8N594	471 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	XAGE3	Q8WTP9	111 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	VPS33B	Q9H267	617 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	PRDM10	Q9NQV6	1147 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	ADAMTSL1	Q8N6G6	1762 aa		11.97	□□□□□ -0.49
FAM20A-204	ENST00000590873	BBOX1	O75936	387 aa		11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	HCLS1	P14317	486 aa	Predicted RBP	11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	ECE1	P42892	770 aa		11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	SCNN1D	P51172	638 aa		11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	LBX1	P52954	281 aa		11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	PROSER3	Q2NL68	480 aa		11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	CCDC146	Q8IYE0	955 aa		11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	ADARB2	Q9NS39	739 aa	Known RBP	11.96	□□□□□ -0.49
FAM20A-204	ENST00000590873	ZNRF3	Q9ULT6	936 aa		11.96	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms