RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CCDC146Q8IYE0 955 aa28.55■■■□□ 2.16
DDX39A-215ENST00000590696 ANXA1P04083 346 aa28.54■■■□□ 2.16
DDX39A-215ENST00000590696 PROSER3Q2NL68 480 aa28.54■■■□□ 2.16
DDX39A-215ENST00000590696 PSMD1Q99460 953 aa28.54■■■□□ 2.16
DDX39A-215ENST00000590696 TAF1DQ9H5J8 278 aaPredicted RBP28.54■■■□□ 2.16
DDX39A-215ENST00000590696 PARP10Q53GL7 1025 aa28.53■■■□□ 2.16
DDX39A-215ENST00000590696 CC2D2BQ6DHV5 1058 aa28.53■■■□□ 2.16
DDX39A-215ENST00000590696 RBM17Q96I25 401 aaKnown RBP28.53■■■□□ 2.16
DDX39A-215ENST00000590696 SCN4AP35499 1836 aa28.53■■■□□ 2.16
DDX39A-215ENST00000590696 SNED1Q8TER0 1413 aa28.52■■■□□ 2.16
DDX39A-215ENST00000590696 NECTIN2Q92692 538 aa28.52■■■□□ 2.16
DDX39A-215ENST00000590696 FZD9O00144 591 aa28.51■■■□□ 2.15
DDX39A-215ENST00000590696 C3orf67Q6ZVT6 689 aa28.51■■■□□ 2.15
DDX39A-215ENST00000590696 CRAMP1Q96RY5 1269 aa28.51■■■□□ 2.15
DDX39A-215ENST00000590696 LDHDQ86WU2 507 aa28.5■■■□□ 2.15
DDX39A-215ENST00000590696 WDR43Q15061 677 aaKnown RBP eCLIP28.49■■■□□ 2.15
DDX39A-215ENST00000590696 JDP2Q8WYK2 163 aa28.49■■■□□ 2.15
DDX39A-215ENST00000590696 RUNDC1Q96C34 613 aa28.49■■■□□ 2.15
DDX39A-215ENST00000590696 NLRP3Q96P20 1036 aa28.49■■■□□ 2.15
DDX39A-215ENST00000590696 UTP14AQ9BVJ6 771 aaKnown RBP28.49■■■□□ 2.15
DDX39A-215ENST00000590696 HACL1Q9UJ83 578 aa28.49■■■□□ 2.15
DDX39A-215ENST00000590696 CHL1O00533 1208 aa28.48■■■□□ 2.15
DDX39A-215ENST00000590696 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
DDX39A-215ENST00000590696 PPEF1O14829 653 aaPredicted RBP28.48■■■□□ 2.15
DDX39A-215ENST00000590696 AIMP1Q12904 312 aaKnown RBP28.48■■■□□ 2.15
DDX39A-215ENST00000590696 EAPPQ56P03 285 aaPredicted RBP28.48■■■□□ 2.15
DDX39A-215ENST00000590696 COPS6Q7L5N1 327 aa28.48■■■□□ 2.15
DDX39A-215ENST00000590696 CREBZFQ9NS37 354 aa28.48■■■□□ 2.15
DDX39A-215ENST00000590696 LAS1LQ9Y4W2 734 aaKnown RBP28.48■■■□□ 2.15
DDX39A-215ENST00000590696 KRT24Q2M2I5 525 aa28.47■■■□□ 2.15
DDX39A-215ENST00000590696 GRIPAP1Q4V328 841 aa28.47■■■□□ 2.15
DDX39A-215ENST00000590696 SLC51AQ86UW1 340 aa28.47■■■□□ 2.15
DDX39A-215ENST00000590696 XAGE3Q8WTP9 111 aa28.47■■■□□ 2.15
DDX39A-215ENST00000590696 TRIM35Q9UPQ4 493 aa28.47■■■□□ 2.15
DDX39A-215ENST00000590696 EPHX2P34913 555 aa28.46■■■□□ 2.15
DDX39A-215ENST00000590696 SLC10A5Q5PT55 438 aa28.46■■■□□ 2.15
DDX39A-215ENST00000590696 RNF123Q5XPI4 1314 aa28.45■■■□□ 2.15
DDX39A-215ENST00000590696 PCNTO95613 3336 aa28.45■■■□□ 2.15
DDX39A-215ENST00000590696 COL13A1Q5TAT6 717 aaPredicted RBP28.45■■■□□ 2.14
DDX39A-215ENST00000590696 GPC2Q8N158 579 aa28.45■■■□□ 2.14
DDX39A-215ENST00000590696 ADAMTS8Q9UP79 889 aa28.45■■■□□ 2.14
DDX39A-215ENST00000590696 EIF6P56537 245 aaKnown RBP28.44■■■□□ 2.14
DDX39A-215ENST00000590696 HSP90AB3PQ58FF7 597 aa28.44■■■□□ 2.14
DDX39A-215ENST00000590696 DDX21Q9NR30 783 aaKnown RBP eCLIP28.44■■■□□ 2.14
DDX39A-215ENST00000590696 CLEC11AQ9Y240 323 aa28.44■■■□□ 2.14
DDX39A-215ENST00000590696 PASKQ96RG2 1323 aa28.43■■■□□ 2.14
DDX39A-215ENST00000590696 COL4A5P29400 1685 aa28.43■■■□□ 2.14
DDX39A-215ENST00000590696 MKRN1Q9UHC7 482 aaKnown RBP28.43■■■□□ 2.14
DDX39A-215ENST00000590696 HSPA1AP0DMV8 641 aaKnown RBP28.42■■■□□ 2.14
DDX39A-215ENST00000590696 HSPA1BP0DMV9 641 aaKnown RBP28.42■■■□□ 2.14
DDX39A-215ENST00000590696 PNMA8AQ86V59 439 aaPredicted RBP28.42■■■□□ 2.14
DDX39A-215ENST00000590696 NLRP10Q86W26 655 aa28.42■■■□□ 2.14
DDX39A-215ENST00000590696 LARGE2Q8N3Y3 721 aa28.42■■■□□ 2.14
DDX39A-215ENST00000590696 GJA3Q9Y6H8 435 aa28.42■■■□□ 2.14
DDX39A-215ENST00000590696 ITGBL1O95965 494 aaPredicted RBP28.41■■■□□ 2.14
DDX39A-215ENST00000590696 TCIRG1Q13488 830 aa28.41■■■□□ 2.14
DDX39A-215ENST00000590696 TMX4Q9H1E5 349 aaPredicted RBP28.41■■■□□ 2.14
DDX39A-215ENST00000590696 ANKRD36CQ5JPF3 1778 aa28.41■■■□□ 2.14
DDX39A-215ENST00000590696 CHPF2Q9P2E5 772 aa28.4■■■□□ 2.14
DDX39A-215ENST00000590696 ATP6V0A2Q9Y487 856 aa28.4■■■□□ 2.14
DDX39A-215ENST00000590696 ABCC4O15439 1325 aa28.4■■■□□ 2.14
DDX39A-215ENST00000590696 HCLS1P14317 486 aaPredicted RBP28.39■■■□□ 2.14
DDX39A-215ENST00000590696 TRMT112Q9UI30 125 aaKnown RBP28.39■■■□□ 2.14
DDX39A-215ENST00000590696 ADAMTSL1Q8N6G6 1762 aa28.38■■■□□ 2.13
DDX39A-215ENST00000590696 HDGFL1Q5TGJ6 251 aa28.38■■■□□ 2.13
DDX39A-215ENST00000590696 PPIP5K2O43314 1243 aa28.36■■■□□ 2.13
DDX39A-215ENST00000590696 MAP1SQ66K74 1059 aaPredicted RBP28.36■■■□□ 2.13
DDX39A-215ENST00000590696 NIM1KQ8IY84 436 aa28.36■■■□□ 2.13
DDX39A-215ENST00000590696 PRKRIP1Q9H875 184 aaPredicted RBP28.36■■■□□ 2.13
DDX39A-215ENST00000590696 LAMB2P55268 1798 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 TMEM88BA6NKF7 163 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 BBOX1O75936 387 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 HOXB7P09629 217 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 LMOD1P29536 600 aaPredicted RBP28.35■■■□□ 2.13
DDX39A-215ENST00000590696 AOC3Q16853 763 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 CNTROBQ8N137 903 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 CFAP44Q96MT7 982 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 SH3TC1Q8TE82 1336 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 CNTNAP1P78357 1384 aa28.35■■■□□ 2.13
DDX39A-215ENST00000590696 PLBD2Q8NHP8 589 aa28.34■■■□□ 2.13
DDX39A-215ENST00000590696 ZNF428Q96B54 188 aa28.34■■■□□ 2.13
DDX39A-215ENST00000590696 VPS33BQ9H267 617 aa28.34■■■□□ 2.13
DDX39A-215ENST00000590696 DBF4Q9UBU7 674 aaPredicted RBP28.34■■■□□ 2.13
DDX39A-215ENST00000590696 SCNN1DP51172 638 aa28.33■■■□□ 2.13
DDX39A-215ENST00000590696 ANKRD13DQ6ZTN6 518 aa28.33■■■□□ 2.13
DDX39A-215ENST00000590696 DDX46Q7L014 1031 aaKnown RBP28.33■■■□□ 2.13
DDX39A-215ENST00000590696 SP8Q8IXZ3 490 aa28.33■■■□□ 2.13
DDX39A-215ENST00000590696 SUPT20HQ8NEM7 779 aa28.33■■■□□ 2.13
DDX39A-215ENST00000590696 LTBP1Q14766 1721 aa28.32■■■□□ 2.12
DDX39A-215ENST00000590696 EPS15P42566 896 aa28.32■■■□□ 2.12
DDX39A-215ENST00000590696 RTFDC1Q9BY42 306 aaPredicted RBP28.32■■■□□ 2.12
DDX39A-215ENST00000590696 DUSP27Q5VZP5 1158 aa28.31■■■□□ 2.12
DDX39A-215ENST00000590696 DPP8Q6V1X1 898 aaPredicted RBP28.31■■■□□ 2.12
DDX39A-215ENST00000590696 MPNDQ8N594 471 aa28.31■■■□□ 2.12
DDX39A-215ENST00000590696 MBIPQ9NS73 344 aa28.31■■■□□ 2.12
DDX39A-215ENST00000590696 GRAPQ13588 217 aa28.3■■■□□ 2.12
DDX39A-215ENST00000590696 TNS4Q8IZW8 715 aa28.3■■■□□ 2.12
DDX39A-215ENST00000590696 GRAPLQ8TC17 118 aaPredicted RBP28.3■■■□□ 2.12
DDX39A-215ENST00000590696 ISCA1Q9BUE6 129 aa28.29■■■□□ 2.12
DDX39A-215ENST00000590696 HYPKQ9NX55 129 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms