RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CHADLQ6NUI6 762 aa23.47■■□□□ 1.35
PRKCSH-211ENST00000590098 NTSR2O95665 410 aa23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 SCN4AP35499 1836 aa23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 PROSER3Q2NL68 480 aa23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 LRP10Q7Z4F1 713 aa23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 NECTIN2Q92692 538 aa23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 RBM17Q96I25 401 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 PCNTO95613 3336 aa23.46■■□□□ 1.35
PRKCSH-211ENST00000590098 ANXA1P04083 346 aa23.45■■□□□ 1.34
PRKCSH-211ENST00000590098 SLC51AQ86UW1 340 aa23.45■■□□□ 1.34
PRKCSH-211ENST00000590098 L3MBTL3Q96JM7 780 aaPredicted RBP23.45■■□□□ 1.34
PRKCSH-211ENST00000590098 PSMD1Q99460 953 aa23.45■■□□□ 1.34
PRKCSH-211ENST00000590098 CHL1O00533 1208 aa23.44■■□□□ 1.34
PRKCSH-211ENST00000590098 GRIPAP1Q4V328 841 aa23.44■■□□□ 1.34
PRKCSH-211ENST00000590098 NLRP3Q96P20 1036 aa23.44■■□□□ 1.34
PRKCSH-211ENST00000590098 CRAMP1Q96RY5 1269 aa23.44■■□□□ 1.34
PRKCSH-211ENST00000590098 UTP14AQ9BVJ6 771 aaKnown RBP23.44■■□□□ 1.34
PRKCSH-211ENST00000590098 ZNF541Q9H0D2 1346 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 AIMP1Q12904 312 aaKnown RBP23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 HSP90AB3PQ58FF7 597 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 C3orf67Q6ZVT6 689 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 COPS6Q7L5N1 327 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 JDP2Q8WYK2 163 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 ADAMTS8Q9UP79 889 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 TRIM35Q9UPQ4 493 aa23.43■■□□□ 1.34
PRKCSH-211ENST00000590098 XAGE3Q8WTP9 111 aa23.42■■□□□ 1.34
PRKCSH-211ENST00000590098 TMX4Q9H1E5 349 aaPredicted RBP23.42■■□□□ 1.34
PRKCSH-211ENST00000590098 TAF1DQ9H5J8 278 aaPredicted RBP23.42■■□□□ 1.34
PRKCSH-211ENST00000590098 PPEF1O14829 653 aaPredicted RBP23.41■■□□□ 1.34
PRKCSH-211ENST00000590098 LDHDQ86WU2 507 aa23.41■■□□□ 1.34
PRKCSH-211ENST00000590098 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
PRKCSH-211ENST00000590098 ANKRD36CQ5JPF3 1778 aa23.41■■□□□ 1.34
PRKCSH-211ENST00000590098 SNED1Q8TER0 1413 aa23.41■■□□□ 1.34
PRKCSH-211ENST00000590098 FZD9O00144 591 aa23.4■■□□□ 1.34
PRKCSH-211ENST00000590098 TCERG1O14776 1098 aaKnown RBP23.4■■□□□ 1.34
PRKCSH-211ENST00000590098 SLC10A5Q5PT55 438 aa23.4■■□□□ 1.34
PRKCSH-211ENST00000590098 COL13A1Q5TAT6 717 aaPredicted RBP23.4■■□□□ 1.34
PRKCSH-211ENST00000590098 HACL1Q9UJ83 578 aa23.4■■□□□ 1.34
PRKCSH-211ENST00000590098 RNF123Q5XPI4 1314 aa23.39■■□□□ 1.34
PRKCSH-211ENST00000590098 KRT24Q2M2I5 525 aa23.39■■□□□ 1.33
PRKCSH-211ENST00000590098 EAPPQ56P03 285 aaPredicted RBP23.39■■□□□ 1.33
PRKCSH-211ENST00000590098 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
PRKCSH-211ENST00000590098 GPC2Q8N158 579 aa23.38■■□□□ 1.33
PRKCSH-211ENST00000590098 PRKRIP1Q9H875 184 aaPredicted RBP23.38■■□□□ 1.33
PRKCSH-211ENST00000590098 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 NLRP10Q86W26 655 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 LARGE2Q8N3Y3 721 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 CREBZFQ9NS37 354 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 CHPF2Q9P2E5 772 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 CLEC11AQ9Y240 323 aa23.37■■□□□ 1.33
PRKCSH-211ENST00000590098 EPHX2P34913 555 aa23.36■■□□□ 1.33
PRKCSH-211ENST00000590098 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
PRKCSH-211ENST00000590098 HOXB7P09629 217 aa23.35■■□□□ 1.33
PRKCSH-211ENST00000590098 PNMA8AQ86V59 439 aaPredicted RBP23.35■■□□□ 1.33
PRKCSH-211ENST00000590098 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
PRKCSH-211ENST00000590098 GJA3Q9Y6H8 435 aa23.35■■□□□ 1.33
PRKCSH-211ENST00000590098 COL4A5P29400 1685 aa23.35■■□□□ 1.33
PRKCSH-211ENST00000590098 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
PRKCSH-211ENST00000590098 HCLS1P14317 486 aaPredicted RBP23.34■■□□□ 1.33
PRKCSH-211ENST00000590098 DBF4Q9UBU7 674 aaPredicted RBP23.34■■□□□ 1.33
PRKCSH-211ENST00000590098 ATP6V0A2Q9Y487 856 aa23.34■■□□□ 1.33
PRKCSH-211ENST00000590098 ABCC4O15439 1325 aa23.33■■□□□ 1.33
PRKCSH-211ENST00000590098 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.33
PRKCSH-211ENST00000590098 PASKQ96RG2 1323 aa23.33■■□□□ 1.33
PRKCSH-211ENST00000590098 LAMB2P55268 1798 aa23.33■■□□□ 1.33
PRKCSH-211ENST00000590098 MKRN1Q9UHC7 482 aaKnown RBP23.33■■□□□ 1.33
PRKCSH-211ENST00000590098 BBOX1O75936 387 aa23.32■■□□□ 1.32
PRKCSH-211ENST00000590098 LMOD1P29536 600 aaPredicted RBP23.32■■□□□ 1.32
PRKCSH-211ENST00000590098 ANKRD13DQ6ZTN6 518 aa23.32■■□□□ 1.32
PRKCSH-211ENST00000590098 DDX46Q7L014 1031 aaKnown RBP23.32■■□□□ 1.32
PRKCSH-211ENST00000590098 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
PRKCSH-211ENST00000590098 PLBD2Q8NHP8 589 aa23.32■■□□□ 1.32
PRKCSH-211ENST00000590098 PPIP5K2O43314 1243 aa23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 HSPA1AP0DMV8 641 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 HSPA1BP0DMV9 641 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 SUPT20HQ8NEM7 779 aa23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 ZNF428Q96B54 188 aa23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 VPS33BQ9H267 617 aa23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 HYPKQ9NX55 129 aa23.31■■□□□ 1.32
PRKCSH-211ENST00000590098 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
PRKCSH-211ENST00000590098 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
PRKCSH-211ENST00000590098 APAF1O14727 1248 aa23.29■■□□□ 1.32
PRKCSH-211ENST00000590098 SP8Q8IXZ3 490 aa23.29■■□□□ 1.32
PRKCSH-211ENST00000590098 ADAMTSL1Q8N6G6 1762 aa23.29■■□□□ 1.32
PRKCSH-211ENST00000590098 TMEM88BA6NKF7 163 aa23.28■■□□□ 1.32
PRKCSH-211ENST00000590098 AOC3Q16853 763 aa23.28■■□□□ 1.32
PRKCSH-211ENST00000590098 DPP8Q6V1X1 898 aaPredicted RBP23.28■■□□□ 1.32
PRKCSH-211ENST00000590098 GNAI1P63096 354 aa23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 GRAPQ13588 217 aa23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 MAP1SQ66K74 1059 aaPredicted RBP23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 CNTROBQ8N137 903 aa23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 MPNDQ8N594 471 aa23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 GRAPLQ8TC17 118 aaPredicted RBP23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
PRKCSH-211ENST00000590098 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
PRKCSH-211ENST00000590098 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
PRKCSH-211ENST00000590098 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms