RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 HACL1Q9UJ83 578 aa18.43■□□□□ 0.54
SF3A2-205ENST00000590034 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
SF3A2-205ENST00000590034 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
SF3A2-205ENST00000590034 NEFMP07197 916 aa18.41■□□□□ 0.54
SF3A2-205ENST00000590034 HOXA10P31260 410 aaPredicted RBP18.41■□□□□ 0.54
SF3A2-205ENST00000590034 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
SF3A2-205ENST00000590034 LRP10Q7Z4F1 713 aa18.41■□□□□ 0.54
SF3A2-205ENST00000590034 ZNF34Q8IZ26 560 aa18.41■□□□□ 0.54
SF3A2-205ENST00000590034 NTSR2O95665 410 aa18.4■□□□□ 0.54
SF3A2-205ENST00000590034 GPC2Q8N158 579 aa18.4■□□□□ 0.54
SF3A2-205ENST00000590034 TMEM88BA6NKF7 163 aa18.39■□□□□ 0.53
SF3A2-205ENST00000590034 FOXN1O15353 648 aa18.39■□□□□ 0.53
SF3A2-205ENST00000590034 VEGFBP49765 207 aa18.39■□□□□ 0.53
SF3A2-205ENST00000590034 MAP1SQ66K74 1059 aaPredicted RBP18.39■□□□□ 0.53
SF3A2-205ENST00000590034 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
SF3A2-205ENST00000590034 LAMB2P55268 1798 aa18.39■□□□□ 0.53
SF3A2-205ENST00000590034 ANKRD36CQ5JPF3 1778 aa18.38■□□□□ 0.53
SF3A2-205ENST00000590034 PDIA6Q15084 440 aa18.38■□□□□ 0.53
SF3A2-205ENST00000590034 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
SF3A2-205ENST00000590034 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
SF3A2-205ENST00000590034 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
SF3A2-205ENST00000590034 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
SF3A2-205ENST00000590034 CC2D2BQ6DHV5 1058 aa18.37■□□□□ 0.53
SF3A2-205ENST00000590034 PNMA8AQ86V59 439 aaPredicted RBP18.37■□□□□ 0.53
SF3A2-205ENST00000590034 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
SF3A2-205ENST00000590034 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
SF3A2-205ENST00000590034 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
SF3A2-205ENST00000590034 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
SF3A2-205ENST00000590034 PPEF1O14829 653 aaPredicted RBP18.36■□□□□ 0.53
SF3A2-205ENST00000590034 ANXA1P04083 346 aa18.36■□□□□ 0.53
SF3A2-205ENST00000590034 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
SF3A2-205ENST00000590034 TSPYL4Q9UJ04 414 aa18.36■□□□□ 0.53
SF3A2-205ENST00000590034 SCNN1DP51172 638 aa18.35■□□□□ 0.53
SF3A2-205ENST00000590034 GJA3Q9Y6H8 435 aa18.35■□□□□ 0.53
SF3A2-205ENST00000590034 EIF6P56537 245 aaKnown RBP18.34■□□□□ 0.53
SF3A2-205ENST00000590034 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
SF3A2-205ENST00000590034 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
SF3A2-205ENST00000590034 TAF1P21675 1872 aa18.33■□□□□ 0.53
SF3A2-205ENST00000590034 RASSF10A6NK89 507 aa18.33■□□□□ 0.52
SF3A2-205ENST00000590034 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
SF3A2-205ENST00000590034 EPS15P42566 896 aa18.33■□□□□ 0.52
SF3A2-205ENST00000590034 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.52
SF3A2-205ENST00000590034 TRPM7Q96QT4 1865 aa18.33■□□□□ 0.52
SF3A2-205ENST00000590034 THSD7BQ9C0I4 1608 aa18.32■□□□□ 0.52
SF3A2-205ENST00000590034 RIPK4P57078 832 aa18.32■□□□□ 0.52
SF3A2-205ENST00000590034 GRIPAP1Q4V328 841 aa18.32■□□□□ 0.52
SF3A2-205ENST00000590034 PARP10Q53GL7 1025 aa18.32■□□□□ 0.52
SF3A2-205ENST00000590034 PPP1R42Q7Z4L9 355 aa18.32■□□□□ 0.52
SF3A2-205ENST00000590034 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
SF3A2-205ENST00000590034 ABCC4O15439 1325 aa18.31■□□□□ 0.52
SF3A2-205ENST00000590034 AOC3Q16853 763 aa18.31■□□□□ 0.52
SF3A2-205ENST00000590034 SLC10A5Q5PT55 438 aa18.31■□□□□ 0.52
SF3A2-205ENST00000590034 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
SF3A2-205ENST00000590034 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
SF3A2-205ENST00000590034 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
SF3A2-205ENST00000590034 WBP1LQ9NX94 342 aa18.31■□□□□ 0.52
SF3A2-205ENST00000590034 PPIP5K2O43314 1243 aa18.3■□□□□ 0.52
SF3A2-205ENST00000590034 LMOD1P29536 600 aaPredicted RBP18.3■□□□□ 0.52
SF3A2-205ENST00000590034 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
SF3A2-205ENST00000590034 DEFB115Q30KQ5 88 aa18.3■□□□□ 0.52
SF3A2-205ENST00000590034 PRDM10Q9NQV6 1147 aa18.3■□□□□ 0.52
SF3A2-205ENST00000590034 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
SF3A2-205ENST00000590034 CTCFP49711 727 aaPredicted RBP18.29■□□□□ 0.52
SF3A2-205ENST00000590034 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
SF3A2-205ENST00000590034 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
SF3A2-205ENST00000590034 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
SF3A2-205ENST00000590034 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
SF3A2-205ENST00000590034 WDR33Q9C0J8 1336 aaKnown RBP18.28■□□□□ 0.52
SF3A2-205ENST00000590034 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
SF3A2-205ENST00000590034 NLRP10Q86W26 655 aa18.28■□□□□ 0.52
SF3A2-205ENST00000590034 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
SF3A2-205ENST00000590034 AIDAQ96BJ3 306 aa18.28■□□□□ 0.52
SF3A2-205ENST00000590034 BABAM1Q9NWV8 329 aa18.28■□□□□ 0.52
SF3A2-205ENST00000590034 ABT1Q9ULW3 272 aaKnown RBP18.28■□□□□ 0.52
SF3A2-205ENST00000590034 DUOX1Q9NRD9 1551 aa18.28■□□□□ 0.52
SF3A2-205ENST00000590034 LRRC37AA6NMS7 1700 aa18.27■□□□□ 0.52
SF3A2-205ENST00000590034 TRAF5O00463 557 aa18.27■□□□□ 0.52
SF3A2-205ENST00000590034 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
SF3A2-205ENST00000590034 LBX1P52954 281 aa18.27■□□□□ 0.52
SF3A2-205ENST00000590034 RTFDC1Q9BY42 306 aaPredicted RBP18.27■□□□□ 0.52
SF3A2-205ENST00000590034 GPRC5DQ9NZD1 345 aa18.27■□□□□ 0.52
SF3A2-205ENST00000590034 COL4A1P02462 1669 aa18.26■□□□□ 0.51
SF3A2-205ENST00000590034 CXCL9Q07325 125 aa18.26■□□□□ 0.51
SF3A2-205ENST00000590034 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
SF3A2-205ENST00000590034 CST9Q5W186 159 aa18.26■□□□□ 0.51
SF3A2-205ENST00000590034 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
SF3A2-205ENST00000590034 ZNF428Q96B54 188 aa18.26■□□□□ 0.51
SF3A2-205ENST00000590034 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
SF3A2-205ENST00000590034 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
SF3A2-205ENST00000590034 ZNRF3Q9ULT6 936 aa18.25■□□□□ 0.51
SF3A2-205ENST00000590034 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
SF3A2-205ENST00000590034 TCIRG1Q13488 830 aa18.24■□□□□ 0.51
SF3A2-205ENST00000590034 RALBP1Q15311 655 aa18.24■□□□□ 0.51
SF3A2-205ENST00000590034 HSP90AB3PQ58FF7 597 aa18.24■□□□□ 0.51
SF3A2-205ENST00000590034 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
SF3A2-205ENST00000590034 VPS33BQ9H267 617 aa18.24■□□□□ 0.51
SF3A2-205ENST00000590034 CHL1O00533 1208 aa18.23■□□□□ 0.51
SF3A2-205ENST00000590034 BBOX1O75936 387 aa18.23■□□□□ 0.51
SF3A2-205ENST00000590034 GMPSP49915 693 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-205ENST00000590034 KIAA2012Q0VF49 1180 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms