RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 HOXA10P31260 410 aaPredicted RBP27.55■■■□□ 2
TMC6-213ENST00000589933 HSP90AB3PQ58FF7 597 aa27.55■■■□□ 2
TMC6-213ENST00000589933 CCDC146Q8IYE0 955 aa27.55■■■□□ 2
TMC6-213ENST00000589933 NLRP3Q96P20 1036 aa27.55■■■□□ 2
TMC6-213ENST00000589933 PSMD1Q99460 953 aa27.55■■■□□ 2
TMC6-213ENST00000589933 L3MBTL3Q96JM7 780 aaPredicted RBP27.54■■■□□ 2
TMC6-213ENST00000589933 ANKRD36CQ5JPF3 1778 aa27.53■■■□□ 2
TMC6-213ENST00000589933 CRAMP1Q96RY5 1269 aa27.53■■■□□ 2
TMC6-213ENST00000589933 UTP14AQ9BVJ6 771 aaKnown RBP27.53■■■□□ 2
TMC6-213ENST00000589933 LAS1LQ9Y4W2 734 aaKnown RBP27.53■■■□□ 2
TMC6-213ENST00000589933 RNF123Q5XPI4 1314 aa27.52■■■□□ 2
TMC6-213ENST00000589933 NTSR2O95665 410 aa27.52■■■□□ 2
TMC6-213ENST00000589933 OLFM4Q6UX06 510 aa27.52■■■□□ 2
TMC6-213ENST00000589933 PDIA6Q15084 440 aa27.51■■□□□ 1.99
TMC6-213ENST00000589933 LDHDQ86WU2 507 aa27.51■■□□□ 1.99
TMC6-213ENST00000589933 AIMP1Q12904 312 aaKnown RBP27.5■■□□□ 1.99
TMC6-213ENST00000589933 NECTIN2Q92692 538 aa27.5■■□□□ 1.99
TMC6-213ENST00000589933 HACL1Q9UJ83 578 aa27.5■■□□□ 1.99
TMC6-213ENST00000589933 CHL1O00533 1208 aa27.49■■□□□ 1.99
TMC6-213ENST00000589933 PPEF1O14829 653 aaPredicted RBP27.49■■□□□ 1.99
TMC6-213ENST00000589933 EIF6P56537 245 aaKnown RBP27.49■■□□□ 1.99
TMC6-213ENST00000589933 COPS6Q7L5N1 327 aa27.49■■□□□ 1.99
TMC6-213ENST00000589933 TAF1DQ9H5J8 278 aaPredicted RBP27.49■■□□□ 1.99
TMC6-213ENST00000589933 DDX21Q9NR30 783 aaKnown RBP eCLIP27.49■■□□□ 1.99
TMC6-213ENST00000589933 FZD9O00144 591 aa27.48■■□□□ 1.99
TMC6-213ENST00000589933 ANXA1P04083 346 aa27.48■■□□□ 1.99
TMC6-213ENST00000589933 LRP10Q7Z4F1 713 aa27.48■■□□□ 1.99
TMC6-213ENST00000589933 ZNF541Q9H0D2 1346 aa27.47■■□□□ 1.99
TMC6-213ENST00000589933 PROSER3Q2NL68 480 aa27.47■■□□□ 1.99
TMC6-213ENST00000589933 EAPPQ56P03 285 aaPredicted RBP27.47■■□□□ 1.99
TMC6-213ENST00000589933 SLC10A5Q5PT55 438 aa27.47■■□□□ 1.99
TMC6-213ENST00000589933 PNMA8AQ86V59 439 aaPredicted RBP27.47■■□□□ 1.99
TMC6-213ENST00000589933 GPC2Q8N158 579 aa27.47■■□□□ 1.99
TMC6-213ENST00000589933 XAGE3Q8WTP9 111 aa27.47■■□□□ 1.99
TMC6-213ENST00000589933 HOXB7P09629 217 aa27.46■■□□□ 1.99
TMC6-213ENST00000589933 LARGE2Q8N3Y3 721 aa27.46■■□□□ 1.99
TMC6-213ENST00000589933 CREBZFQ9NS37 354 aa27.46■■□□□ 1.99
TMC6-213ENST00000589933 ADAMTS8Q9UP79 889 aa27.46■■□□□ 1.99
TMC6-213ENST00000589933 CLEC11AQ9Y240 323 aa27.46■■□□□ 1.99
TMC6-213ENST00000589933 TRIM35Q9UPQ4 493 aa27.45■■□□□ 1.98
TMC6-213ENST00000589933 TCERG1O14776 1098 aaKnown RBP27.44■■□□□ 1.98
TMC6-213ENST00000589933 EPHX2P34913 555 aa27.44■■□□□ 1.98
TMC6-213ENST00000589933 TCIRG1Q13488 830 aa27.44■■□□□ 1.98
TMC6-213ENST00000589933 HDGFL1Q5TGJ6 251 aa27.44■■□□□ 1.98
TMC6-213ENST00000589933 POTEIP0CG38 1075 aa27.43■■□□□ 1.98
TMC6-213ENST00000589933 POTEJP0CG39 1038 aa27.43■■□□□ 1.98
TMC6-213ENST00000589933 LMOD1P29536 600 aaPredicted RBP27.43■■□□□ 1.98
TMC6-213ENST00000589933 SUPT20HQ8NEM7 779 aa27.43■■□□□ 1.98
TMC6-213ENST00000589933 TRMT112Q9UI30 125 aaKnown RBP27.43■■□□□ 1.98
TMC6-213ENST00000589933 NLRP10Q86W26 655 aa27.42■■□□□ 1.98
TMC6-213ENST00000589933 NIM1KQ8IY84 436 aa27.42■■□□□ 1.98
TMC6-213ENST00000589933 CFAP44Q96MT7 982 aa27.42■■□□□ 1.98
TMC6-213ENST00000589933 VPS33BQ9H267 617 aa27.42■■□□□ 1.98
TMC6-213ENST00000589933 PRKRIP1Q9H875 184 aaPredicted RBP27.42■■□□□ 1.98
TMC6-213ENST00000589933 DBF4Q9UBU7 674 aaPredicted RBP27.42■■□□□ 1.98
TMC6-213ENST00000589933 LAMB2P55268 1798 aa27.42■■□□□ 1.98
TMC6-213ENST00000589933 SH3TC1Q8TE82 1336 aa27.41■■□□□ 1.98
TMC6-213ENST00000589933 SNED1Q8TER0 1413 aa27.41■■□□□ 1.98
TMC6-213ENST00000589933 BBOX1O75936 387 aa27.41■■□□□ 1.98
TMC6-213ENST00000589933 CALD1Q05682 793 aaKnown RBP27.41■■□□□ 1.98
TMC6-213ENST00000589933 CHPF2Q9P2E5 772 aa27.41■■□□□ 1.98
TMC6-213ENST00000589933 ATP6V0A2Q9Y487 856 aa27.41■■□□□ 1.98
TMC6-213ENST00000589933 GJA3Q9Y6H8 435 aa27.41■■□□□ 1.98
TMC6-213ENST00000589933 DDX46Q7L014 1031 aaKnown RBP27.4■■□□□ 1.98
TMC6-213ENST00000589933 C3orf67Q6ZVT6 689 aa27.39■■□□□ 1.98
TMC6-213ENST00000589933 PLBD2Q8NHP8 589 aa27.39■■□□□ 1.98
TMC6-213ENST00000589933 PPIP5K2O43314 1243 aa27.38■■□□□ 1.97
TMC6-213ENST00000589933 KRT24Q2M2I5 525 aa27.38■■□□□ 1.97
TMC6-213ENST00000589933 ANKRD13DQ6ZTN6 518 aa27.38■■□□□ 1.97
TMC6-213ENST00000589933 HYPKQ9NX55 129 aa27.38■■□□□ 1.97
TMC6-213ENST00000589933 ABCC4O15439 1325 aa27.38■■□□□ 1.97
TMC6-213ENST00000589933 HCLS1P14317 486 aaPredicted RBP27.36■■□□□ 1.97
TMC6-213ENST00000589933 DUSP27Q5VZP5 1158 aa27.36■■□□□ 1.97
TMC6-213ENST00000589933 SP8Q8IXZ3 490 aa27.36■■□□□ 1.97
TMC6-213ENST00000589933 CHMP4AQ9BY43 222 aa27.36■■□□□ 1.97
TMC6-213ENST00000589933 PASKQ96RG2 1323 aa27.36■■□□□ 1.97
TMC6-213ENST00000589933 TMEM88BA6NKF7 163 aa27.35■■□□□ 1.97
TMC6-213ENST00000589933 DPP8Q6V1X1 898 aaPredicted RBP27.35■■□□□ 1.97
TMC6-213ENST00000589933 TMC4Q7Z404 712 aa27.35■■□□□ 1.97
TMC6-213ENST00000589933 MKRN1Q9UHC7 482 aaKnown RBP27.35■■□□□ 1.97
TMC6-213ENST00000589933 HSPA1AP0DMV8 641 aaKnown RBP27.34■■□□□ 1.97
TMC6-213ENST00000589933 HSPA1BP0DMV9 641 aaKnown RBP27.34■■□□□ 1.97
TMC6-213ENST00000589933 GNAI1P63096 354 aa27.34■■□□□ 1.97
TMC6-213ENST00000589933 MPNDQ8N594 471 aa27.34■■□□□ 1.97
TMC6-213ENST00000589933 ADAMTSL1Q8N6G6 1762 aa27.33■■□□□ 1.97
TMC6-213ENST00000589933 GRAPQ13588 217 aa27.33■■□□□ 1.97
TMC6-213ENST00000589933 CNTROBQ8N137 903 aa27.33■■□□□ 1.97
TMC6-213ENST00000589933 GRAPLQ8TC17 118 aaPredicted RBP27.33■■□□□ 1.97
TMC6-213ENST00000589933 MBIPQ9NS73 344 aa27.33■■□□□ 1.97
TMC6-213ENST00000589933 ITGBL1O95965 494 aaPredicted RBP27.32■■□□□ 1.96
TMC6-213ENST00000589933 AOC3Q16853 763 aa27.32■■□□□ 1.96
TMC6-213ENST00000589933 IFT57Q9NWB7 429 aa27.32■■□□□ 1.96
TMC6-213ENST00000589933 APAF1O14727 1248 aa27.31■■□□□ 1.96
TMC6-213ENST00000589933 HSP90B1P14625 803 aaKnown RBP27.31■■□□□ 1.96
TMC6-213ENST00000589933 RTFDC1Q9BY42 306 aaPredicted RBP27.31■■□□□ 1.96
TMC6-213ENST00000589933 ZNRF3Q9ULT6 936 aa27.31■■□□□ 1.96
TMC6-213ENST00000589933 GOLGA2Q08379 1002 aa27.3■■□□□ 1.96
TMC6-213ENST00000589933 MAP1SQ66K74 1059 aaPredicted RBP27.3■■□□□ 1.96
TMC6-213ENST00000589933 CNTNAP1P78357 1384 aa27.3■■□□□ 1.96
TMC6-213ENST00000589933 COL4A5P29400 1685 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms