RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MYL6BP14649 208 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 GPTP24298 496 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 GTF2E1P29083 439 aaPredicted RBP24.38■■□□□ 1.49
CCDC43-204ENST00000588687 EPHX2P34913 555 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 SUSD4Q5VX71 490 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 KIF6Q6ZMV9 814 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 C3orf67Q6ZVT6 689 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 ZBTB3Q9H5J0 574 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 LAMB2P55268 1798 aa24.38■■□□□ 1.49
CCDC43-204ENST00000588687 GPC2Q8N158 579 aa24.37■■□□□ 1.49
CCDC43-204ENST00000588687 NEFMP07197 916 aa24.36■■□□□ 1.49
CCDC43-204ENST00000588687 PDIA6Q15084 440 aa24.36■■□□□ 1.49
CCDC43-204ENST00000588687 GIGYF2Q6Y7W6 1299 aaKnown RBP24.36■■□□□ 1.49
CCDC43-204ENST00000588687 EAPPQ56P03 285 aaPredicted RBP24.35■■□□□ 1.49
CCDC43-204ENST00000588687 CC2D2BQ6DHV5 1058 aa24.35■■□□□ 1.49
CCDC43-204ENST00000588687 THSD7BQ9C0I4 1608 aa24.35■■□□□ 1.49
CCDC43-204ENST00000588687 TMEM88BA6NKF7 163 aa24.33■■□□□ 1.49
CCDC43-204ENST00000588687 CAPN15O75808 1086 aa24.33■■□□□ 1.49
CCDC43-204ENST00000588687 RPGRQ92834 1020 aaKnown RBP24.33■■□□□ 1.49
CCDC43-204ENST00000588687 CRAMP1Q96RY5 1269 aa24.33■■□□□ 1.49
CCDC43-204ENST00000588687 MAPK8IP3Q9UPT6 1336 aa24.33■■□□□ 1.48
CCDC43-204ENST00000588687 FOXN1O15353 648 aa24.32■■□□□ 1.48
CCDC43-204ENST00000588687 PROSER3Q2NL68 480 aa24.32■■□□□ 1.48
CCDC43-204ENST00000588687 PNMA8AQ86V59 439 aaPredicted RBP24.32■■□□□ 1.48
CCDC43-204ENST00000588687 VEGFBP49765 207 aa24.31■■□□□ 1.48
CCDC43-204ENST00000588687 SCNN1DP51172 638 aa24.31■■□□□ 1.48
CCDC43-204ENST00000588687 MAP1SQ66K74 1059 aaPredicted RBP24.31■■□□□ 1.48
CCDC43-204ENST00000588687 PPEF1O14829 653 aaPredicted RBP24.3■■□□□ 1.48
CCDC43-204ENST00000588687 JDP2Q8WYK2 163 aa24.3■■□□□ 1.48
CCDC43-204ENST00000588687 TSPYL4Q9UJ04 414 aa24.3■■□□□ 1.48
CCDC43-204ENST00000588687 RASSF10A6NK89 507 aa24.29■■□□□ 1.48
CCDC43-204ENST00000588687 GRIPAP1Q4V328 841 aa24.29■■□□□ 1.48
CCDC43-204ENST00000588687 PARP10Q53GL7 1025 aa24.29■■□□□ 1.48
CCDC43-204ENST00000588687 CNTROBQ8N137 903 aa24.29■■□□□ 1.48
CCDC43-204ENST00000588687 LRRC37AA6NMS7 1700 aa24.28■■□□□ 1.48
CCDC43-204ENST00000588687 RBM17Q96I25 401 aaKnown RBP24.28■■□□□ 1.48
CCDC43-204ENST00000588687 PNNQ9H307 717 aaKnown RBP24.28■■□□□ 1.48
CCDC43-204ENST00000588687 ANXA1P04083 346 aa24.27■■□□□ 1.48
CCDC43-204ENST00000588687 SLC10A5Q5PT55 438 aa24.27■■□□□ 1.48
CCDC43-204ENST00000588687 BABAM1Q9NWV8 329 aa24.27■■□□□ 1.48
CCDC43-204ENST00000588687 CLEC11AQ9Y240 323 aa24.27■■□□□ 1.48
CCDC43-204ENST00000588687 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
CCDC43-204ENST00000588687 ABCC4O15439 1325 aa24.27■■□□□ 1.48
CCDC43-204ENST00000588687 EIF6P56537 245 aaKnown RBP24.26■■□□□ 1.47
CCDC43-204ENST00000588687 PPP1R42Q7Z4L9 355 aa24.26■■□□□ 1.47
CCDC43-204ENST00000588687 LARGE2Q8N3Y3 721 aa24.26■■□□□ 1.47
CCDC43-204ENST00000588687 GJA3Q9Y6H8 435 aa24.26■■□□□ 1.47
CCDC43-204ENST00000588687 DDX60Q8IY21 1712 aaKnown RBP24.26■■□□□ 1.47
CCDC43-204ENST00000588687 TRPM7Q96QT4 1865 aa24.26■■□□□ 1.47
CCDC43-204ENST00000588687 EPS15P42566 896 aa24.25■■□□□ 1.47
CCDC43-204ENST00000588687 RIPK4P57078 832 aa24.25■■□□□ 1.47
CCDC43-204ENST00000588687 WBP1LQ9NX94 342 aa24.25■■□□□ 1.47
CCDC43-204ENST00000588687 ATP6V0A2Q9Y487 856 aa24.25■■□□□ 1.47
CCDC43-204ENST00000588687 TMPOP42166 694 aaKnown RBP24.24■■□□□ 1.47
CCDC43-204ENST00000588687 UTP14AQ9BVJ6 771 aaKnown RBP24.24■■□□□ 1.47
CCDC43-204ENST00000588687 RTFDC1Q9BY42 306 aaPredicted RBP24.24■■□□□ 1.47
CCDC43-204ENST00000588687 PRDM10Q9NQV6 1147 aa24.24■■□□□ 1.47
CCDC43-204ENST00000588687 TAF1P21675 1872 aa24.24■■□□□ 1.47
CCDC43-204ENST00000588687 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
CCDC43-204ENST00000588687 EIF2S2P20042 333 aaKnown RBP24.23■■□□□ 1.47
CCDC43-204ENST00000588687 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
CCDC43-204ENST00000588687 DDX21Q9NR30 783 aaKnown RBP eCLIP24.23■■□□□ 1.47
CCDC43-204ENST00000588687 FMR1Q06787 632 aaKnown RBP eCLIP24.22■■□□□ 1.47
CCDC43-204ENST00000588687 AOC3Q16853 763 aa24.22■■□□□ 1.47
CCDC43-204ENST00000588687 NLRP10Q86W26 655 aa24.22■■□□□ 1.47
CCDC43-204ENST00000588687 COL4A1P02462 1669 aa24.21■■□□□ 1.47
CCDC43-204ENST00000588687 PPIP5K2O43314 1243 aa24.21■■□□□ 1.47
CCDC43-204ENST00000588687 LMOD1P29536 600 aaPredicted RBP24.21■■□□□ 1.47
CCDC43-204ENST00000588687 NIM1KQ8IY84 436 aa24.21■■□□□ 1.47
CCDC43-204ENST00000588687 CTCFP49711 727 aaPredicted RBP24.2■■□□□ 1.46
CCDC43-204ENST00000588687 RALBP1Q15311 655 aa24.2■■□□□ 1.46
CCDC43-204ENST00000588687 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
CCDC43-204ENST00000588687 DEFB115Q30KQ5 88 aa24.2■■□□□ 1.46
CCDC43-204ENST00000588687 COPS6Q7L5N1 327 aa24.2■■□□□ 1.46
CCDC43-204ENST00000588687 XAGE3Q8WTP9 111 aa24.2■■□□□ 1.46
CCDC43-204ENST00000588687 VPS33BQ9H267 617 aa24.2■■□□□ 1.46
CCDC43-204ENST00000588687 USP50Q70EL3 339 aaPredicted RBP24.19■■□□□ 1.46
CCDC43-204ENST00000588687 WDR33Q9C0J8 1336 aaKnown RBP24.18■■□□□ 1.46
CCDC43-204ENST00000588687 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
CCDC43-204ENST00000588687 GPRC5DQ9NZD1 345 aa24.18■■□□□ 1.46
CCDC43-204ENST00000588687 CHL1O00533 1208 aa24.17■■□□□ 1.46
CCDC43-204ENST00000588687 HCLS1P14317 486 aaPredicted RBP24.17■■□□□ 1.46
CCDC43-204ENST00000588687 CXCL9Q07325 125 aa24.17■■□□□ 1.46
CCDC43-204ENST00000588687 HSP90AB3PQ58FF7 597 aa24.17■■□□□ 1.46
CCDC43-204ENST00000588687 NECTIN2Q92692 538 aa24.17■■□□□ 1.46
CCDC43-204ENST00000588687 AIDAQ96BJ3 306 aa24.17■■□□□ 1.46
CCDC43-204ENST00000588687 TRAF5O00463 557 aa24.16■■□□□ 1.46
CCDC43-204ENST00000588687 TCIRG1Q13488 830 aa24.16■■□□□ 1.46
CCDC43-204ENST00000588687 CST9Q5W186 159 aa24.16■■□□□ 1.46
CCDC43-204ENST00000588687 ZNRF3Q9ULT6 936 aa24.16■■□□□ 1.46
CCDC43-204ENST00000588687 ABT1Q9ULW3 272 aaKnown RBP24.16■■□□□ 1.46
CCDC43-204ENST00000588687 TRIM35Q9UPQ4 493 aa24.16■■□□□ 1.46
CCDC43-204ENST00000588687 BBOX1O75936 387 aa24.15■■□□□ 1.46
CCDC43-204ENST00000588687 HSPA8P11142 646 aaKnown RBP24.15■■□□□ 1.46
CCDC43-204ENST00000588687 KIAA2012Q0VF49 1180 aa24.15■■□□□ 1.46
CCDC43-204ENST00000588687 AIMP1Q12904 312 aaKnown RBP24.15■■□□□ 1.46
CCDC43-204ENST00000588687 SP8Q8IXZ3 490 aa24.15■■□□□ 1.46
CCDC43-204ENST00000588687 ADARB2Q9NS39 739 aaKnown RBP24.15■■□□□ 1.46
CCDC43-204ENST00000588687 SH3TC1Q8TE82 1336 aa24.14■■□□□ 1.46
CCDC43-204ENST00000588687 LBX1P52954 281 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms