RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 RBM47A0AV96 593 aaKnown RBP5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 ATXN7O15265 892 aaPredicted RBP5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 EGFRP00533 1210 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 PDGFAP04085 211 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 ATP2B2Q01814 1243 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 DNM1Q05193 864 aaKnown RBP5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 GJD3Q8N144 294 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 CCDC155Q8N6L0 562 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 FRMD6Q96NE9 622 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 FAM129BQ96TA1 746 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 DNAJC25Q9H1X3 360 aa5.59□□□□□ -1.51
SPIRE1-212ENST00000588236 SENP3-EIF4A1A0A087X0R7 540 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 OPLAHO14841 1288 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 ITGA6P23229 1130 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 TYRO3Q06418 890 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 PCSK7Q16549 785 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 EAPPQ56P03 285 aaPredicted RBP5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 EDEM1Q92611 657 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 ZCCHC2Q9C0B9 1178 aaKnown RBP5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 RUBCNLQ9H714 662 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 GPAMQ9HCL2 828 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 BRD7Q9NPI1 651 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 ATXN7L1Q9ULK2 861 aaPredicted RBP5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 POLIQ9UNA4 740 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 NSFL1CQ9UNZ2 370 aaKnown RBP5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 KCNH4Q9UQ05 1017 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 BCS1LQ9Y276 419 aa5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 RTCBQ9Y3I0 505 aaKnown RBP5.58□□□□□ -1.52
SPIRE1-212ENST00000588236 ZBTB39O15060 712 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 TREHO43280 583 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 FAM182BQ5T319 152 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 ALG1LQ6GMV1 187 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 ZNF280CQ8ND82 737 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 GPR152Q8TDT2 470 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 FBF1Q8TES7 1133 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 NANOS1Q8WY41 292 aaKnown RBP5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 NUDT16Q96DE0 195 aaKnown RBP5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 BCL2L13Q9BXK5 485 aa5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 GMPR2Q9P2T1 348 aaKnown RBP5.57□□□□□ -1.52
SPIRE1-212ENST00000588236 C8orf34Q49A92 452 aa5.56□□□□□ -1.52
SPIRE1-212ENST00000588236 SV2AQ7L0J3 742 aa5.56□□□□□ -1.52
SPIRE1-212ENST00000588236 CMTR1Q8N1G2 835 aaKnown RBP5.56□□□□□ -1.52
SPIRE1-212ENST00000588236 HSH2DQ96JZ2 352 aa5.56□□□□□ -1.52
SPIRE1-212ENST00000588236 CCDC87Q9NVE4 849 aa5.56□□□□□ -1.52
SPIRE1-212ENST00000588236 MARK1Q9P0L2 795 aa5.56□□□□□ -1.52
SPIRE1-212ENST00000588236 UBAP1LF5GYI3 381 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 GIPC1O14908 333 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 EFSO43281 561 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 RANGAP1P46060 587 aaPredicted RBP5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 TNP2Q05952 138 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 FMR1Q06787 632 aaKnown RBP eCLIP5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 CCINQ13939 588 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 DSC3Q14574 896 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 TTC39BQ5VTQ0 682 aaPredicted RBP5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 ZNF438Q7Z4V0 828 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 NLRP13Q86W25 1043 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 NPAS4Q8IUM7 802 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 SNX29Q8TEQ0 813 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 AVENQ9NQS1 362 aaPredicted RBP5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 DACH1Q9UI36 760 aa5.55□□□□□ -1.52
SPIRE1-212ENST00000588236 E9PSI1 815 aa5.54□□□□□ -1.52
SPIRE1-212ENST00000588236 XYLBO75191 536 aa5.54□□□□□ -1.52
SPIRE1-212ENST00000588236 MAP3K6O95382 1288 aa5.54□□□□□ -1.52
SPIRE1-212ENST00000588236 DBN1Q16643 649 aa5.54□□□□□ -1.52
SPIRE1-212ENST00000588236 ATCAYQ86WG3 371 aa5.54□□□□□ -1.52
SPIRE1-212ENST00000588236 PPP4R2Q9NY27 417 aa5.54□□□□□ -1.52
SPIRE1-212ENST00000588236 KHNYNO15037 678 aaKnown RBP5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 PPFIA3O75145 1194 aa5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 PRPF40AO75400 957 aaKnown RBP5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 MAPTP10636 758 aaKnown RBP5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 SLC16A10Q8TF71 515 aa5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 ZNF837Q96EG3 531 aaPredicted RBP5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 CSRNP1Q96S65 589 aa5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 ELP3Q9H9T3 547 aa5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 NDFIP2Q9NV92 336 aa5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 NXF1Q9UBU9 619 aaKnown RBP5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 KCNMB2Q9Y691 235 aa5.53□□□□□ -1.52
SPIRE1-212ENST00000588236 BNIP3LO60238 219 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 SNRPBP14678 240 aaKnown RBP5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 VAMP1P23763 118 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 SOX18P35713 384 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 ENOX2Q16206 610 aaKnown RBP5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 FAM26DQ5JW98 314 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 GSX2Q9BZM3 304 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 NIF3L1Q9GZT8 377 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 ZFYVE1Q9HBF4 777 aa5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 ABI2Q9NYB9 513 aaPredicted RBP5.52□□□□□ -1.53
SPIRE1-212ENST00000588236 SOBPA7XYQ1 873 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 PHACTR2O75167 634 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 TNFRSF21O75509 655 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 LDHBP07195 334 aaKnown RBP5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 PSAPP07602 524 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 FGFR3P22607 806 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 MAPK8P45983 427 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 MAP2K3P46734 347 aa5.51□□□□□ -1.53
SPIRE1-212ENST00000588236 XPCQ01831 940 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms