RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 CHIC1Q5VXU3 224 aa14.89□□□□□ -0.03
SPIRE1-212ENST00000588236 AEBP2Q6ZN18 517 aaPredicted RBP14.84□□□□□ -0.03
SPIRE1-212ENST00000588236 PHF23Q9BUL5 403 aaPredicted RBP13□□□□□ -0.33
SPIRE1-212ENST00000588236 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
SPIRE1-212ENST00000588236 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
SPIRE1-212ENST00000588236 FOXD1Q16676 465 aa11.67□□□□□ -0.54
SPIRE1-212ENST00000588236 ADRA2BP18089 450 aa11.38□□□□□ -0.59
SPIRE1-212ENST00000588236 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
SPIRE1-212ENST00000588236 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
SPIRE1-212ENST00000588236 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
SPIRE1-212ENST00000588236 MSH5O43196 834 aa10.86□□□□□ -0.67
SPIRE1-212ENST00000588236 PPP4R3CPQ6ZMV5 832 aa10.77□□□□□ -0.69
SPIRE1-212ENST00000588236 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
SPIRE1-212ENST00000588236 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.69
SPIRE1-212ENST00000588236 KCNA4P22459 653 aa10.7□□□□□ -0.7
SPIRE1-212ENST00000588236 CNKSR2Q8WXI2 1034 aa10.49□□□□□ -0.73
SPIRE1-212ENST00000588236 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
SPIRE1-212ENST00000588236 SLC4A1APQ9BWU0 796 aaKnown RBP10.34□□□□□ -0.75
SPIRE1-212ENST00000588236 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
SPIRE1-212ENST00000588236 DNAJC5BQ9UF47 199 aa10.23□□□□□ -0.77
SPIRE1-212ENST00000588236 MAPK8IP2Q13387 824 aaPredicted RBP10.22□□□□□ -0.77
SPIRE1-212ENST00000588236 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
SPIRE1-212ENST00000588236 DMRT2Q9Y5R5 561 aa10.19□□□□□ -0.78
SPIRE1-212ENST00000588236 HOXD11P31277 338 aaPredicted RBP10.09□□□□□ -0.79
SPIRE1-212ENST00000588236 CSRNP3Q8WYN3 585 aa10.01□□□□□ -0.81
SPIRE1-212ENST00000588236 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
SPIRE1-212ENST00000588236 ZBTB22O15209 634 aa9.78□□□□□ -0.84
SPIRE1-212ENST00000588236 DCAF8L1A6NGE4 600 aa9.68□□□□□ -0.86
SPIRE1-212ENST00000588236 MYCNP04198 464 aaPredicted RBP9.68□□□□□ -0.86
SPIRE1-212ENST00000588236 SLC4A2P04920 1241 aa9.68□□□□□ -0.86
SPIRE1-212ENST00000588236 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
SPIRE1-212ENST00000588236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.63□□□□□ -0.87
SPIRE1-212ENST00000588236 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
SPIRE1-212ENST00000588236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPIRE1-212ENST00000588236 SAMD1Q6SPF0 538 aaPredicted RBP9.53□□□□□ -0.88
SPIRE1-212ENST00000588236 APLP2Q06481 763 aa9.52□□□□□ -0.89
SPIRE1-212ENST00000588236 U3KPZ7 1027 aaPredicted RBP9.4□□□□□ -0.9
SPIRE1-212ENST00000588236 C1QBPQ07021 282 aaKnown RBP9.24□□□□□ -0.93
SPIRE1-212ENST00000588236 RNF39Q9H2S5 420 aa9.23□□□□□ -0.93
SPIRE1-212ENST00000588236 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
SPIRE1-212ENST00000588236 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
SPIRE1-212ENST00000588236 CAPN15O75808 1086 aa9.07□□□□□ -0.96
SPIRE1-212ENST00000588236 TRHP20396 242 aaPredicted RBP9.06□□□□□ -0.96
SPIRE1-212ENST00000588236 FKBP8Q14318 412 aa9.06□□□□□ -0.96
SPIRE1-212ENST00000588236 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
SPIRE1-212ENST00000588236 FBLN2P98095 1184 aa9.04□□□□□ -0.96
SPIRE1-212ENST00000588236 SPINK5Q9NQ38 1064 aaPredicted RBP9.01□□□□□ -0.97
SPIRE1-212ENST00000588236 POLA2Q14181 598 aa8.99□□□□□ -0.97
SPIRE1-212ENST00000588236 CACNB1Q02641 598 aaPredicted RBP8.89□□□□□ -0.99
SPIRE1-212ENST00000588236 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
SPIRE1-212ENST00000588236 FBXO3Q9UK99 471 aa8.88□□□□□ -0.99
SPIRE1-212ENST00000588236 DSG3P32926 999 aa8.84□□□□□ -0.99
SPIRE1-212ENST00000588236 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
SPIRE1-212ENST00000588236 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
SPIRE1-212ENST00000588236 ABCB7O75027 752 aa8.81□□□□□ -1
SPIRE1-212ENST00000588236 PROM2Q8N271 834 aa8.77□□□□□ -1.01
SPIRE1-212ENST00000588236 SPDYE2BA6NHP3 402 aa8.74□□□□□ -1.01
SPIRE1-212ENST00000588236 SPDYE6P0CI01 402 aa8.74□□□□□ -1.01
SPIRE1-212ENST00000588236 SPDYE2Q495Y8 402 aa8.74□□□□□ -1.01
SPIRE1-212ENST00000588236 ZNF692Q9BU19 519 aaPredicted RBP8.7□□□□□ -1.02
SPIRE1-212ENST00000588236 STAG3Q9UJ98 1225 aa8.64□□□□□ -1.03
SPIRE1-212ENST00000588236 SSUH2Q9Y2M2 353 aa8.63□□□□□ -1.03
SPIRE1-212ENST00000588236 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
SPIRE1-212ENST00000588236 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
SPIRE1-212ENST00000588236 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
SPIRE1-212ENST00000588236 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
SPIRE1-212ENST00000588236 PABPN1Q86U42 306 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPIRE1-212ENST00000588236 PLEKHG5O94827 1062 aa8.52□□□□□ -1.05
SPIRE1-212ENST00000588236 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
SPIRE1-212ENST00000588236 AKT1S1Q96B36 256 aa8.48□□□□□ -1.05
SPIRE1-212ENST00000588236 IFNLR1Q8IU57 520 aaPredicted RBP8.44□□□□□ -1.06
SPIRE1-212ENST00000588236 PLCD3Q8N3E9 789 aa8.44□□□□□ -1.06
SPIRE1-212ENST00000588236 KLHL34Q8N239 644 aa8.43□□□□□ -1.06
SPIRE1-212ENST00000588236 SPDYE1Q8NFV5 336 aaPredicted RBP8.43□□□□□ -1.06
SPIRE1-212ENST00000588236 MIER1Q8N108 512 aa8.42□□□□□ -1.06
SPIRE1-212ENST00000588236 SPOCK2Q92563 424 aa8.41□□□□□ -1.06
SPIRE1-212ENST00000588236 POTEHQ6S545 545 aa8.36□□□□□ -1.07
SPIRE1-212ENST00000588236 PRR29P0C7W0 189 aa8.31□□□□□ -1.08
SPIRE1-212ENST00000588236 REM2Q8IYK8 340 aaPredicted RBP8.31□□□□□ -1.08
SPIRE1-212ENST00000588236 TRIM41Q8WV44 630 aa8.3□□□□□ -1.08
SPIRE1-212ENST00000588236 SLC24A1O60721 1099 aa8.27□□□□□ -1.09
SPIRE1-212ENST00000588236 CLEC11AQ9Y240 323 aa8.27□□□□□ -1.09
SPIRE1-212ENST00000588236 PKD2Q13563 968 aa8.24□□□□□ -1.09
SPIRE1-212ENST00000588236 GSE1Q14687 1217 aa8.24□□□□□ -1.09
SPIRE1-212ENST00000588236 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
SPIRE1-212ENST00000588236 NPM1P06748 294 aaKnown RBP eCLIP8.21□□□□□ -1.1
SPIRE1-212ENST00000588236 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
SPIRE1-212ENST00000588236 DCAF8L2P0C7V8 631 aa8.18□□□□□ -1.1
SPIRE1-212ENST00000588236 CIZ1Q9ULV3 898 aaPredicted RBP8.18□□□□□ -1.1
SPIRE1-212ENST00000588236 PITPNM1O00562 1244 aa8.17□□□□□ -1.1
SPIRE1-212ENST00000588236 CREBZFQ9NS37 354 aa8.16□□□□□ -1.1
SPIRE1-212ENST00000588236 FAM212AQ96EL1 285 aa8.15□□□□□ -1.1
SPIRE1-212ENST00000588236 NUBP1P53384 320 aa8.12□□□□□ -1.11
SPIRE1-212ENST00000588236 DCAF8Q5TAQ9 597 aa8.12□□□□□ -1.11
SPIRE1-212ENST00000588236 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.12□□□□□ -1.11
SPIRE1-212ENST00000588236 BBXQ8WY36 941 aaPredicted RBP8.1□□□□□ -1.11
SPIRE1-212ENST00000588236 CHRM1P11229 460 aaPredicted RBP8.09□□□□□ -1.11
SPIRE1-212ENST00000588236 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
SPIRE1-212ENST00000588236 PLCB2Q00722 1185 aa8.08□□□□□ -1.12
SPIRE1-212ENST00000588236 RGL2O15211 777 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms