RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TCERG1O14776 1098 aaKnown RBP18.73■□□□□ 0.59
VMP1-206ENST00000587945 HOXA10P31260 410 aaPredicted RBP18.73■□□□□ 0.59
VMP1-206ENST00000587945 UTP14AQ9BVJ6 771 aaKnown RBP18.73■□□□□ 0.59
VMP1-206ENST00000587945 DDX21Q9NR30 783 aaKnown RBP eCLIP18.73■□□□□ 0.59
VMP1-206ENST00000587945 CHPF2Q9P2E5 772 aa18.73■□□□□ 0.59
VMP1-206ENST00000587945 ZNF541Q9H0D2 1346 aa18.73■□□□□ 0.59
VMP1-206ENST00000587945 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
VMP1-206ENST00000587945 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
VMP1-206ENST00000587945 ZNF428Q96B54 188 aa18.72■□□□□ 0.59
VMP1-206ENST00000587945 KLRG1Q96E93 195 aa18.72■□□□□ 0.59
VMP1-206ENST00000587945 RBM17Q96I25 401 aaKnown RBP18.72■□□□□ 0.59
VMP1-206ENST00000587945 APAF1O14727 1248 aa18.71■□□□□ 0.59
VMP1-206ENST00000587945 IARSP41252 1262 aaKnown RBP18.71■□□□□ 0.59
VMP1-206ENST00000587945 CCDC88AQ3V6T2 1871 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 HDGFL1Q5TGJ6 251 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 NLRP10Q86W26 655 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 CFAP44Q96MT7 982 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 NLRP3Q96P20 1036 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
VMP1-206ENST00000587945 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 WDR90Q96KV7 1748 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 PPEF1O14829 653 aaPredicted RBP18.69■□□□□ 0.58
VMP1-206ENST00000587945 HCLS1P14317 486 aaPredicted RBP18.69■□□□□ 0.58
VMP1-206ENST00000587945 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 HSP90AB3PQ58FF7 597 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 PSMD1Q99460 953 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 MBIPQ9NS73 344 aa18.69■□□□□ 0.58
VMP1-206ENST00000587945 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
VMP1-206ENST00000587945 NUP98P52948 1817 aa18.68■□□□□ 0.58
VMP1-206ENST00000587945 DUSP27Q5VZP5 1158 aa18.68■□□□□ 0.58
VMP1-206ENST00000587945 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
VMP1-206ENST00000587945 L3MBTL3Q96JM7 780 aaPredicted RBP18.68■□□□□ 0.58
VMP1-206ENST00000587945 TAF1DQ9H5J8 278 aaPredicted RBP18.68■□□□□ 0.58
VMP1-206ENST00000587945 FZD9O00144 591 aa18.67■□□□□ 0.58
VMP1-206ENST00000587945 CHADLQ6NUI6 762 aa18.67■□□□□ 0.58
VMP1-206ENST00000587945 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
VMP1-206ENST00000587945 IQCA1LA6NCM1 817 aa18.66■□□□□ 0.58
VMP1-206ENST00000587945 HOXB7P09629 217 aa18.66■□□□□ 0.58
VMP1-206ENST00000587945 ZNF853P0CG23 659 aa18.66■□□□□ 0.58
VMP1-206ENST00000587945 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
VMP1-206ENST00000587945 EAPPQ56P03 285 aaPredicted RBP18.65■□□□□ 0.58
VMP1-206ENST00000587945 JMYQ8N9B5 988 aa18.65■□□□□ 0.58
VMP1-206ENST00000587945 JDP2Q8WYK2 163 aa18.65■□□□□ 0.58
VMP1-206ENST00000587945 DBF4Q9UBU7 674 aaPredicted RBP18.65■□□□□ 0.58
VMP1-206ENST00000587945 ABCC4O15439 1325 aa18.65■□□□□ 0.58
VMP1-206ENST00000587945 ATP5J2-PTCD1G3V325 749 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
VMP1-206ENST00000587945 ANKRD13DQ6ZTN6 518 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 LARGE2Q8N3Y3 721 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 PLBD2Q8NHP8 589 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 IFT57Q9NWB7 429 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 HACL1Q9UJ83 578 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
VMP1-206ENST00000587945 DICER1Q9UPY3 1922 aaKnown RBP18.64■□□□□ 0.57
VMP1-206ENST00000587945 IFFO2Q5TF58 517 aa18.63■□□□□ 0.57
VMP1-206ENST00000587945 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
VMP1-206ENST00000587945 GJA3Q9Y6H8 435 aa18.63■□□□□ 0.57
VMP1-206ENST00000587945 COL4A5P29400 1685 aa18.63■□□□□ 0.57
VMP1-206ENST00000587945 EPHX2P34913 555 aa18.62■□□□□ 0.57
VMP1-206ENST00000587945 EIF6P56537 245 aaKnown RBP18.62■□□□□ 0.57
VMP1-206ENST00000587945 GRIPAP1Q4V328 841 aa18.62■□□□□ 0.57
VMP1-206ENST00000587945 GPC2Q8N158 579 aa18.62■□□□□ 0.57
VMP1-206ENST00000587945 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
VMP1-206ENST00000587945 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
VMP1-206ENST00000587945 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
VMP1-206ENST00000587945 GNAI1P63096 354 aa18.61■□□□□ 0.57
VMP1-206ENST00000587945 AOC3Q16853 763 aa18.61■□□□□ 0.57
VMP1-206ENST00000587945 DDX46Q7L014 1031 aaKnown RBP18.61■□□□□ 0.57
VMP1-206ENST00000587945 FAM89AQ96GI7 184 aa18.61■□□□□ 0.57
VMP1-206ENST00000587945 TMX4Q9H1E5 349 aaPredicted RBP18.61■□□□□ 0.57
VMP1-206ENST00000587945 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
VMP1-206ENST00000587945 BBOX1O75936 387 aa18.6■□□□□ 0.57
VMP1-206ENST00000587945 CALD1Q05682 793 aaKnown RBP18.6■□□□□ 0.57
VMP1-206ENST00000587945 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
VMP1-206ENST00000587945 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
VMP1-206ENST00000587945 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
VMP1-206ENST00000587945 GRAPQ13588 217 aa18.59■□□□□ 0.57
VMP1-206ENST00000587945 SP8Q8IXZ3 490 aa18.59■□□□□ 0.57
VMP1-206ENST00000587945 NIM1KQ8IY84 436 aa18.59■□□□□ 0.57
VMP1-206ENST00000587945 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
VMP1-206ENST00000587945 DPP8Q6V1X1 898 aaPredicted RBP18.58■□□□□ 0.56
VMP1-206ENST00000587945 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
VMP1-206ENST00000587945 CREBZFQ9NS37 354 aa18.58■□□□□ 0.56
VMP1-206ENST00000587945 PASKQ96RG2 1323 aa18.57■□□□□ 0.56
VMP1-206ENST00000587945 ITGBL1O95965 494 aaPredicted RBP18.57■□□□□ 0.56
VMP1-206ENST00000587945 SCNN1DP51172 638 aa18.57■□□□□ 0.56
VMP1-206ENST00000587945 MAP1SQ66K74 1059 aaPredicted RBP18.57■□□□□ 0.56
VMP1-206ENST00000587945 MPNDQ8N594 471 aa18.57■□□□□ 0.56
VMP1-206ENST00000587945 RTFDC1Q9BY42 306 aaPredicted RBP18.57■□□□□ 0.56
VMP1-206ENST00000587945 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
VMP1-206ENST00000587945 EPS15P42566 896 aa18.56■□□□□ 0.56
VMP1-206ENST00000587945 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
VMP1-206ENST00000587945 PNMA8AQ86V59 439 aaPredicted RBP18.56■□□□□ 0.56
VMP1-206ENST00000587945 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
VMP1-206ENST00000587945 IRS4O14654 1257 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms