RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 NECTIN2Q92692 538 aa24.58■■□□□ 1.53
TRIM47-205ENST00000587774 COL4A5P29400 1685 aa24.57■■□□□ 1.52
TRIM47-205ENST00000587774 CHL1O00533 1208 aa24.57■■□□□ 1.52
TRIM47-205ENST00000587774 LRRC37AA6NMS7 1700 aa24.57■■□□□ 1.52
TRIM47-205ENST00000587774 DDNO94850 711 aaPredicted RBP24.56■■□□□ 1.52
TRIM47-205ENST00000587774 ZNF277Q9NRM2 450 aaPredicted RBP24.56■■□□□ 1.52
TRIM47-205ENST00000587774 LAS1LQ9Y4W2 734 aaKnown RBP24.56■■□□□ 1.52
TRIM47-205ENST00000587774 RTKN2Q8IZC4 609 aa24.55■■□□□ 1.52
TRIM47-205ENST00000587774 RPGRQ92834 1020 aaKnown RBP24.55■■□□□ 1.52
TRIM47-205ENST00000587774 PARP10Q53GL7 1025 aa24.54■■□□□ 1.52
TRIM47-205ENST00000587774 PPP1R42Q7Z4L9 355 aa24.54■■□□□ 1.52
TRIM47-205ENST00000587774 LTBP1Q14766 1721 aa24.53■■□□□ 1.52
TRIM47-205ENST00000587774 HOXA10P31260 410 aaPredicted RBP24.53■■□□□ 1.52
TRIM47-205ENST00000587774 C3orf67Q6ZVT6 689 aa24.53■■□□□ 1.52
TRIM47-205ENST00000587774 COPS6Q7L5N1 327 aa24.53■■□□□ 1.52
TRIM47-205ENST00000587774 ZNF541Q9H0D2 1346 aa24.53■■□□□ 1.52
TRIM47-205ENST00000587774 AIMP1Q12904 312 aaKnown RBP24.52■■□□□ 1.52
TRIM47-205ENST00000587774 XAGE3Q8WTP9 111 aa24.52■■□□□ 1.52
TRIM47-205ENST00000587774 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRIM47-205ENST00000587774 IARSP41252 1262 aaKnown RBP24.51■■□□□ 1.51
TRIM47-205ENST00000587774 SLC51AQ86UW1 340 aa24.51■■□□□ 1.51
TRIM47-205ENST00000587774 CHPF2Q9P2E5 772 aa24.51■■□□□ 1.51
TRIM47-205ENST00000587774 MYH3P11055 1940 aa24.51■■□□□ 1.51
TRIM47-205ENST00000587774 SYNE4Q8N205 404 aa24.5■■□□□ 1.51
TRIM47-205ENST00000587774 KLRG1Q96E93 195 aa24.5■■□□□ 1.51
TRIM47-205ENST00000587774 PSMD1Q99460 953 aa24.5■■□□□ 1.51
TRIM47-205ENST00000587774 UTP14AQ9BVJ6 771 aaKnown RBP24.5■■□□□ 1.51
TRIM47-205ENST00000587774 L3MBTL3Q96JM7 780 aaPredicted RBP24.49■■□□□ 1.51
TRIM47-205ENST00000587774 CRAMP1Q96RY5 1269 aa24.49■■□□□ 1.51
TRIM47-205ENST00000587774 RNF123Q5XPI4 1314 aa24.49■■□□□ 1.51
TRIM47-205ENST00000587774 PPEF1O14829 653 aaPredicted RBP24.48■■□□□ 1.51
TRIM47-205ENST00000587774 CACNA1FO60840 1977 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 POTEIP0CG38 1075 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 POTEJP0CG39 1038 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 HSP90AB3PQ58FF7 597 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 HDGFL1Q5TGJ6 251 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 CC2D2BQ6DHV5 1058 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 RBM17Q96I25 401 aaKnown RBP24.48■■□□□ 1.51
TRIM47-205ENST00000587774 CFAP44Q96MT7 982 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 TRPM7Q96QT4 1865 aa24.48■■□□□ 1.51
TRIM47-205ENST00000587774 HOXB7P09629 217 aa24.47■■□□□ 1.51
TRIM47-205ENST00000587774 NLRP10Q86W26 655 aa24.47■■□□□ 1.51
TRIM47-205ENST00000587774 NLRP3Q96P20 1036 aa24.47■■□□□ 1.51
TRIM47-205ENST00000587774 SPEF2Q9C093 1822 aa24.47■■□□□ 1.51
TRIM47-205ENST00000587774 IQCA1LA6NCM1 817 aa24.46■■□□□ 1.51
TRIM47-205ENST00000587774 MBIPQ9NS73 344 aa24.46■■□□□ 1.51
TRIM47-205ENST00000587774 ABCC4O15439 1325 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 FZD9O00144 591 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 APAF1O14727 1248 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 TCERG1O14776 1098 aaKnown RBP24.45■■□□□ 1.5
TRIM47-205ENST00000587774 TCIRG1Q13488 830 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 SLC10A5Q5PT55 438 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 CHADLQ6NUI6 762 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 COL4A1P02462 1669 aa24.45■■□□□ 1.5
TRIM47-205ENST00000587774 JMYQ8N9B5 988 aa24.44■■□□□ 1.5
TRIM47-205ENST00000587774 TAF1DQ9H5J8 278 aaPredicted RBP24.44■■□□□ 1.5
TRIM47-205ENST00000587774 DBF4Q9UBU7 674 aaPredicted RBP24.44■■□□□ 1.5
TRIM47-205ENST00000587774 DUOX1Q9NRD9 1551 aa24.44■■□□□ 1.5
TRIM47-205ENST00000587774 DUSP27Q5VZP5 1158 aa24.43■■□□□ 1.5
TRIM47-205ENST00000587774 ZNF853P0CG23 659 aa24.42■■□□□ 1.5
TRIM47-205ENST00000587774 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
TRIM47-205ENST00000587774 JDP2Q8WYK2 163 aa24.42■■□□□ 1.5
TRIM47-205ENST00000587774 TRMT112Q9UI30 125 aaKnown RBP24.42■■□□□ 1.5
TRIM47-205ENST00000587774 SH3TC1Q8TE82 1336 aa24.41■■□□□ 1.5
TRIM47-205ENST00000587774 HCLS1P14317 486 aaPredicted RBP24.41■■□□□ 1.5
TRIM47-205ENST00000587774 PLBD2Q8NHP8 589 aa24.41■■□□□ 1.5
TRIM47-205ENST00000587774 ZNF428Q96B54 188 aa24.41■■□□□ 1.5
TRIM47-205ENST00000587774 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
TRIM47-205ENST00000587774 LDHDQ86WU2 507 aa24.4■■□□□ 1.5
TRIM47-205ENST00000587774 GPC2Q8N158 579 aa24.4■■□□□ 1.5
TRIM47-205ENST00000587774 HACL1Q9UJ83 578 aa24.4■■□□□ 1.5
TRIM47-205ENST00000587774 ATP6V0A2Q9Y487 856 aa24.4■■□□□ 1.5
TRIM47-205ENST00000587774 ANKRD13DQ6ZTN6 518 aa24.39■■□□□ 1.49
TRIM47-205ENST00000587774 GNAI1P63096 354 aa24.38■■□□□ 1.49
TRIM47-205ENST00000587774 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
TRIM47-205ENST00000587774 EAPPQ56P03 285 aaPredicted RBP24.38■■□□□ 1.49
TRIM47-205ENST00000587774 IFFO2Q5TF58 517 aa24.38■■□□□ 1.49
TRIM47-205ENST00000587774 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
TRIM47-205ENST00000587774 HYPKQ9NX55 129 aa24.38■■□□□ 1.49
TRIM47-205ENST00000587774 PSME4Q14997 1843 aa24.38■■□□□ 1.49
TRIM47-205ENST00000587774 EPHX2P34913 555 aa24.37■■□□□ 1.49
TRIM47-205ENST00000587774 EIF6P56537 245 aaKnown RBP24.37■■□□□ 1.49
TRIM47-205ENST00000587774 CALD1Q05682 793 aaKnown RBP24.37■■□□□ 1.49
TRIM47-205ENST00000587774 ISCA1Q9BUE6 129 aa24.37■■□□□ 1.49
TRIM47-205ENST00000587774 ATP5J2-PTCD1G3V325 749 aa24.36■■□□□ 1.49
TRIM47-205ENST00000587774 TMX4Q9H1E5 349 aaPredicted RBP24.36■■□□□ 1.49
TRIM47-205ENST00000587774 GJA3Q9Y6H8 435 aa24.36■■□□□ 1.49
TRIM47-205ENST00000587774 PASKQ96RG2 1323 aa24.35■■□□□ 1.49
TRIM47-205ENST00000587774 PPIP5K2O43314 1243 aa24.35■■□□□ 1.49
TRIM47-205ENST00000587774 AOC3Q16853 763 aa24.35■■□□□ 1.49
TRIM47-205ENST00000587774 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
TRIM47-205ENST00000587774 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
TRIM47-205ENST00000587774 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
TRIM47-205ENST00000587774 CREBZFQ9NS37 354 aa24.34■■□□□ 1.49
TRIM47-205ENST00000587774 POLR2AP24928 1970 aaKnown RBP24.34■■□□□ 1.49
TRIM47-205ENST00000587774 SCN9AQ15858 1988 aa24.34■■□□□ 1.49
TRIM47-205ENST00000587774 BBOX1O75936 387 aa24.33■■□□□ 1.49
TRIM47-205ENST00000587774 GRAPQ13588 217 aa24.33■■□□□ 1.49
TRIM47-205ENST00000587774 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
TRIM47-205ENST00000587774 FAM89AQ96GI7 184 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms