RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
CACNA1A-209ENST00000587525 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-209ENST00000587525 ANO6Q4KMQ2 910 aa16.22■□□□□ 0.19
CACNA1A-209ENST00000587525 MYOM2P54296 1465 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 PTGS1P23219 599 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 HMGN5P82970 282 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 CDC37L1Q7L3B6 337 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 CNNM1Q9NRU3 951 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 DIP2BQ9P265 1576 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 TET3O43151 1660 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 DYNC1I1O14576 645 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 UBE2HP62256 183 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 EAF2Q96CJ1 260 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
CACNA1A-209ENST00000587525 ABCC3O15438 1527 aa16.21■□□□□ 0.18
CACNA1A-209ENST00000587525 ZNF165P49910 485 aa16.21■□□□□ 0.18
CACNA1A-209ENST00000587525 Q6ZUG5 572 aa16.21■□□□□ 0.18
CACNA1A-209ENST00000587525 DBNDD2Q9BQY9 259 aa16.21■□□□□ 0.18
CACNA1A-209ENST00000587525 POLR1AO95602 1720 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 KSR2Q6VAB6 950 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 MTERF4Q7Z6M4 381 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 CEP126Q9P2H0 1117 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 AK9Q5TCS8 1911 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 BRD1O95696 1058 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 ME3Q16798 604 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 CCDC57Q2TAC2 916 aa16.2■□□□□ 0.18
CACNA1A-209ENST00000587525 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
CACNA1A-209ENST00000587525 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
CACNA1A-209ENST00000587525 TULP4Q9NRJ4 1543 aa16.19■□□□□ 0.18
CACNA1A-209ENST00000587525 MAP3K5Q99683 1374 aa16.19■□□□□ 0.18
CACNA1A-209ENST00000587525 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-209ENST00000587525 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 KIF1BO60333 1816 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 FAM135BQ49AJ0 1406 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 CEP152O94986 1710 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 VGLL3A8MV65 326 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 ZSCAN31Q96LW9 406 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
CACNA1A-209ENST00000587525 LIG1P18858 919 aa16.17■□□□□ 0.18
CACNA1A-209ENST00000587525 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-209ENST00000587525 FTOQ9C0B1 505 aaKnown RBP eCLIP16.17■□□□□ 0.18
CACNA1A-209ENST00000587525 SPHKAPQ2M3C7 1700 aa16.17■□□□□ 0.18
CACNA1A-209ENST00000587525 MARCKSP29966 332 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 ZNF445P59923 1031 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 FSIP1Q8NA03 581 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 ZNF496Q96IT1 587 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 CLIP2Q9UDT6 1046 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 PTPN21Q16825 1174 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 HSPA4P34932 840 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 LRMPQ12912 555 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 TRIM29Q14134 588 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
CACNA1A-209ENST00000587525 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 RAD21O60216 631 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 A1BGP04217 495 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 CCDC112Q8NEF3 446 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 HIP1O00291 1037 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 PPP1R9BQ96SB3 815 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 MICU3Q86XE3 530 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 ABCF2Q9UG63 623 aa16.15■□□□□ 0.18
CACNA1A-209ENST00000587525 TPM4P67936 248 aa16.14■□□□□ 0.18
CACNA1A-209ENST00000587525 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.18
CACNA1A-209ENST00000587525 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 LINS1Q8NG48 757 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 RAD50Q92878 1312 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 ANAPC15P60006 121 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 TYRO3Q06418 890 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 METTL24Q5JXM2 366 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
CACNA1A-209ENST00000587525 SLC27A2O14975 620 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 ANKRD1Q15327 319 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 SH2B1Q9NRF2 756 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 ZNF589Q86UQ0 364 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 GLI2P10070 1586 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 TNNT1P13805 278 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 CPLX2Q6PUV4 134 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-209ENST00000587525 SERPINC1P01008 464 aa16.12■□□□□ 0.17
CACNA1A-209ENST00000587525 HSPA2P54652 639 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms