RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-204ENST00000587290 GIGYF2Q6Y7W6 1299 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-204ENST00000587290 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-204ENST00000587290 ZNF428Q96B54 188 aa19.97■□□□□ 0.79
PRKCSH-204ENST00000587290 MYBBP1AQ9BQG0 1328 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-204ENST00000587290 IBTKQ9P2D0 1353 aaPredicted RBP19.96■□□□□ 0.79
PRKCSH-204ENST00000587290 RIC1Q4ADV7 1423 aa19.96■□□□□ 0.79
PRKCSH-204ENST00000587290 CHADLQ6NUI6 762 aa19.96■□□□□ 0.79
PRKCSH-204ENST00000587290 RTKN2Q8IZC4 609 aa19.96■□□□□ 0.79
PRKCSH-204ENST00000587290 ERBB4Q15303 1308 aa19.96■□□□□ 0.79
PRKCSH-204ENST00000587290 L3MBTL3Q96JM7 780 aaPredicted RBP19.95■□□□□ 0.78
PRKCSH-204ENST00000587290 TAF1DQ9H5J8 278 aaPredicted RBP19.95■□□□□ 0.78
PRKCSH-204ENST00000587290 LTBP1Q14766 1721 aa19.95■□□□□ 0.78
PRKCSH-204ENST00000587290 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
PRKCSH-204ENST00000587290 ADAMTSL1Q8N6G6 1762 aa19.95■□□□□ 0.78
PRKCSH-204ENST00000587290 AIMP1Q12904 312 aaKnown RBP19.94■□□□□ 0.78
PRKCSH-204ENST00000587290 EAPPQ56P03 285 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-204ENST00000587290 COL13A1Q5TAT6 717 aaPredicted RBP19.94■□□□□ 0.78
PRKCSH-204ENST00000587290 LAS1LQ9Y4W2 734 aaKnown RBP19.94■□□□□ 0.78
PRKCSH-204ENST00000587290 IQCA1LA6NCM1 817 aa19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 PPEF1O14829 653 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 HOXA10P31260 410 aaPredicted RBP19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 LMOD3Q0VAK6 560 aa19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 MKRN1Q9UHC7 482 aaKnown RBP19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
PRKCSH-204ENST00000587290 FZD9O00144 591 aa19.91■□□□□ 0.78
PRKCSH-204ENST00000587290 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
PRKCSH-204ENST00000587290 LDHDQ86WU2 507 aa19.91■□□□□ 0.78
PRKCSH-204ENST00000587290 PSMD1Q99460 953 aa19.91■□□□□ 0.78
PRKCSH-204ENST00000587290 HSPA1AP0DMV8 641 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 HSPA1BP0DMV9 641 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 EPHX2P34913 555 aa19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 PPP1R42Q7Z4L9 355 aa19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 RBM17Q96I25 401 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 UTP14AQ9BVJ6 771 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 HACL1Q9UJ83 578 aa19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 GJA3Q9Y6H8 435 aa19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 DDX60Q8IY21 1712 aaKnown RBP19.9■□□□□ 0.78
PRKCSH-204ENST00000587290 HCLS1P14317 486 aaPredicted RBP19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 PARP10Q53GL7 1025 aa19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 RUNDC1Q96C34 613 aa19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 CRAMP1Q96RY5 1269 aa19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 CHPF2Q9P2E5 772 aa19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
PRKCSH-204ENST00000587290 ABCC4O15439 1325 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 PASKQ96RG2 1323 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 CHL1O00533 1208 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 NLRP10Q86W26 655 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 JDP2Q8WYK2 163 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 CREBZFQ9NS37 354 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 BABAM1Q9NWV8 329 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 CLEC11AQ9Y240 323 aa19.88■□□□□ 0.77
PRKCSH-204ENST00000587290 LARGE2Q8N3Y3 721 aa19.87■□□□□ 0.77
PRKCSH-204ENST00000587290 NLRP3Q96P20 1036 aa19.87■□□□□ 0.77
PRKCSH-204ENST00000587290 COL4A1P02462 1669 aa19.87■□□□□ 0.77
PRKCSH-204ENST00000587290 ITGBL1O95965 494 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-204ENST00000587290 MAP1SQ66K74 1059 aaPredicted RBP19.86■□□□□ 0.77
PRKCSH-204ENST00000587290 CC2D2BQ6DHV5 1058 aa19.86■□□□□ 0.77
PRKCSH-204ENST00000587290 GPC2Q8N158 579 aa19.86■□□□□ 0.77
PRKCSH-204ENST00000587290 DDX21Q9NR30 783 aaKnown RBP eCLIP19.86■□□□□ 0.77
PRKCSH-204ENST00000587290 EIF6P56537 245 aaKnown RBP19.85■□□□□ 0.77
PRKCSH-204ENST00000587290 AOC3Q16853 763 aa19.85■□□□□ 0.77
PRKCSH-204ENST00000587290 PPIP5K2O43314 1243 aa19.84■□□□□ 0.77
PRKCSH-204ENST00000587290 SLC10A5Q5PT55 438 aa19.84■□□□□ 0.77
PRKCSH-204ENST00000587290 HDGFL1Q5TGJ6 251 aa19.84■□□□□ 0.77
PRKCSH-204ENST00000587290 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
PRKCSH-204ENST00000587290 SCNN1DP51172 638 aa19.83■□□□□ 0.77
PRKCSH-204ENST00000587290 TCIRG1Q13488 830 aa19.83■□□□□ 0.77
PRKCSH-204ENST00000587290 PRKRIP1Q9H875 184 aaPredicted RBP19.83■□□□□ 0.77
PRKCSH-204ENST00000587290 ATP6V0A2Q9Y487 856 aa19.83■□□□□ 0.77
PRKCSH-204ENST00000587290 CNTNAP1P78357 1384 aa19.83■□□□□ 0.76
PRKCSH-204ENST00000587290 CAPN15O75808 1086 aa19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 EPS15P42566 896 aa19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 FMR1Q06787 632 aaKnown RBP eCLIP19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 HSP90AB3PQ58FF7 597 aa19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 NIM1KQ8IY84 436 aa19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 DUOX1Q9NRD9 1551 aa19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 LRRC37AA6NMS7 1700 aa19.82■□□□□ 0.76
PRKCSH-204ENST00000587290 SH3TC1Q8TE82 1336 aa19.81■□□□□ 0.76
PRKCSH-204ENST00000587290 ATP5J2-PTCD1G3V325 749 aa19.81■□□□□ 0.76
PRKCSH-204ENST00000587290 CNTROBQ8N137 903 aa19.81■□□□□ 0.76
PRKCSH-204ENST00000587290 MBIPQ9NS73 344 aa19.81■□□□□ 0.76
PRKCSH-204ENST00000587290 TMEM88BA6NKF7 163 aa19.8■□□□□ 0.76
PRKCSH-204ENST00000587290 RTL5Q5HYW3 569 aaPredicted RBP19.8■□□□□ 0.76
PRKCSH-204ENST00000587290 DUSP27Q5VZP5 1158 aa19.8■□□□□ 0.76
PRKCSH-204ENST00000587290 PNMA8AQ86V59 439 aaPredicted RBP19.8■□□□□ 0.76
PRKCSH-204ENST00000587290 TRPM7Q96QT4 1865 aa19.79■□□□□ 0.76
PRKCSH-204ENST00000587290 LMOD1P29536 600 aaPredicted RBP19.79■□□□□ 0.76
PRKCSH-204ENST00000587290 TNS4Q8IZW8 715 aa19.79■□□□□ 0.76
PRKCSH-204ENST00000587290 FAM89AQ96GI7 184 aa19.79■□□□□ 0.76
PRKCSH-204ENST00000587290 APAF1O14727 1248 aa19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 VEGFBP49765 207 aa19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 GRIPAP1Q4V328 841 aa19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 DPP8Q6V1X1 898 aaPredicted RBP19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 DDX46Q7L014 1031 aaKnown RBP19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 PLBD2Q8NHP8 589 aa19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 CFAP44Q96MT7 982 aa19.78■□□□□ 0.76
PRKCSH-204ENST00000587290 ELL2O00472 640 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms