RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-204ENST00000587275 CCDC146Q8IYE0 955 aa26.51■■□□□ 1.83
U2AF2-204ENST00000587275 PNNQ9H307 717 aaKnown RBP26.51■■□□□ 1.83
U2AF2-204ENST00000587275 HOXA10P31260 410 aaPredicted RBP26.5■■□□□ 1.83
U2AF2-204ENST00000587275 IARSP41252 1262 aaKnown RBP26.5■■□□□ 1.83
U2AF2-204ENST00000587275 DDX10Q13206 875 aaKnown RBP26.5■■□□□ 1.83
U2AF2-204ENST00000587275 KRT24Q2M2I5 525 aa26.5■■□□□ 1.83
U2AF2-204ENST00000587275 RTKN2Q8IZC4 609 aa26.5■■□□□ 1.83
U2AF2-204ENST00000587275 SYNE4Q8N205 404 aa26.5■■□□□ 1.83
U2AF2-204ENST00000587275 TAF1DQ9H5J8 278 aaPredicted RBP26.5■■□□□ 1.83
U2AF2-204ENST00000587275 EIF2S2P20042 333 aaKnown RBP26.49■■□□□ 1.83
U2AF2-204ENST00000587275 COL13A1Q5TAT6 717 aaPredicted RBP26.49■■□□□ 1.83
U2AF2-204ENST00000587275 MYBBP1AQ9BQG0 1328 aaKnown RBP26.48■■□□□ 1.83
U2AF2-204ENST00000587275 FZD9O00144 591 aa26.48■■□□□ 1.83
U2AF2-204ENST00000587275 PSMD1Q99460 953 aa26.48■■□□□ 1.83
U2AF2-204ENST00000587275 COL4A1P02462 1669 aa26.47■■□□□ 1.83
U2AF2-204ENST00000587275 PASKQ96RG2 1323 aa26.47■■□□□ 1.83
U2AF2-204ENST00000587275 TRIM35Q9UPQ4 493 aa26.47■■□□□ 1.83
U2AF2-204ENST00000587275 LRRC37AA6NMS7 1700 aa26.47■■□□□ 1.83
U2AF2-204ENST00000587275 NECTIN2Q92692 538 aa26.46■■□□□ 1.83
U2AF2-204ENST00000587275 RNF123Q5XPI4 1314 aa26.45■■□□□ 1.83
U2AF2-204ENST00000587275 RPGRQ92834 1020 aaKnown RBP26.45■■□□□ 1.82
U2AF2-204ENST00000587275 IQCA1LA6NCM1 817 aa26.44■■□□□ 1.82
U2AF2-204ENST00000587275 LDHDQ86WU2 507 aa26.44■■□□□ 1.82
U2AF2-204ENST00000587275 BABAM1Q9NWV8 329 aa26.44■■□□□ 1.82
U2AF2-204ENST00000587275 NEUROD2Q15784 382 aa26.43■■□□□ 1.82
U2AF2-204ENST00000587275 CRAMP1Q96RY5 1269 aa26.43■■□□□ 1.82
U2AF2-204ENST00000587275 DUOX1Q9NRD9 1551 aa26.42■■□□□ 1.82
U2AF2-204ENST00000587275 CHL1O00533 1208 aa26.42■■□□□ 1.82
U2AF2-204ENST00000587275 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
U2AF2-204ENST00000587275 CREBZFQ9NS37 354 aa26.42■■□□□ 1.82
U2AF2-204ENST00000587275 TRPM7Q96QT4 1865 aa26.42■■□□□ 1.82
U2AF2-204ENST00000587275 TCERG1O14776 1098 aaKnown RBP26.41■■□□□ 1.82
U2AF2-204ENST00000587275 PPEF1O14829 653 aaPredicted RBP26.41■■□□□ 1.82
U2AF2-204ENST00000587275 HSPA1AP0DMV8 641 aaKnown RBP26.41■■□□□ 1.82
U2AF2-204ENST00000587275 HSPA1BP0DMV9 641 aaKnown RBP26.41■■□□□ 1.82
U2AF2-204ENST00000587275 PARP10Q53GL7 1025 aa26.41■■□□□ 1.82
U2AF2-204ENST00000587275 COPS6Q7L5N1 327 aa26.41■■□□□ 1.82
U2AF2-204ENST00000587275 XAGE3Q8WTP9 111 aa26.41■■□□□ 1.82
U2AF2-204ENST00000587275 HACL1Q9UJ83 578 aa26.41■■□□□ 1.82
U2AF2-204ENST00000587275 EPHX2P34913 555 aa26.4■■□□□ 1.82
U2AF2-204ENST00000587275 LMOD3Q0VAK6 560 aa26.4■■□□□ 1.82
U2AF2-204ENST00000587275 SLC10A5Q5PT55 438 aa26.4■■□□□ 1.82
U2AF2-204ENST00000587275 PPP1R42Q7Z4L9 355 aa26.4■■□□□ 1.82
U2AF2-204ENST00000587275 MKRN1Q9UHC7 482 aaKnown RBP26.4■■□□□ 1.82
U2AF2-204ENST00000587275 ABCC4O15439 1325 aa26.39■■□□□ 1.82
U2AF2-204ENST00000587275 EAPPQ56P03 285 aaPredicted RBP26.39■■□□□ 1.82
U2AF2-204ENST00000587275 CC2D2BQ6DHV5 1058 aa26.39■■□□□ 1.82
U2AF2-204ENST00000587275 GPC2Q8N158 579 aa26.39■■□□□ 1.82
U2AF2-204ENST00000587275 RBM17Q96I25 401 aaKnown RBP26.39■■□□□ 1.82
U2AF2-204ENST00000587275 AIMP1Q12904 312 aaKnown RBP26.38■■□□□ 1.81
U2AF2-204ENST00000587275 NLRP10Q86W26 655 aa26.38■■□□□ 1.81
U2AF2-204ENST00000587275 ZNF428Q96B54 188 aa26.38■■□□□ 1.81
U2AF2-204ENST00000587275 RUNDC1Q96C34 613 aa26.38■■□□□ 1.81
U2AF2-204ENST00000587275 UTP14AQ9BVJ6 771 aaKnown RBP26.38■■□□□ 1.81
U2AF2-204ENST00000587275 ADAMTS8Q9UP79 889 aa26.38■■□□□ 1.81
U2AF2-204ENST00000587275 CNTNAP1P78357 1384 aa26.37■■□□□ 1.81
U2AF2-204ENST00000587275 CHPF2Q9P2E5 772 aa26.37■■□□□ 1.81
U2AF2-204ENST00000587275 DDX21Q9NR30 783 aaKnown RBP eCLIP26.36■■□□□ 1.81
U2AF2-204ENST00000587275 HCLS1P14317 486 aaPredicted RBP26.35■■□□□ 1.81
U2AF2-204ENST00000587275 SCNN1DP51172 638 aa26.35■■□□□ 1.81
U2AF2-204ENST00000587275 JDP2Q8WYK2 163 aa26.35■■□□□ 1.81
U2AF2-204ENST00000587275 NLRP3Q96P20 1036 aa26.35■■□□□ 1.81
U2AF2-204ENST00000587275 MAP1SQ66K74 1059 aaPredicted RBP26.34■■□□□ 1.81
U2AF2-204ENST00000587275 LARGE2Q8N3Y3 721 aa26.34■■□□□ 1.81
U2AF2-204ENST00000587275 ATP6V0A2Q9Y487 856 aa26.34■■□□□ 1.81
U2AF2-204ENST00000587275 LAS1LQ9Y4W2 734 aaKnown RBP26.34■■□□□ 1.81
U2AF2-204ENST00000587275 GJA3Q9Y6H8 435 aa26.34■■□□□ 1.81
U2AF2-204ENST00000587275 TCIRG1Q13488 830 aa26.33■■□□□ 1.81
U2AF2-204ENST00000587275 THSD7BQ9C0I4 1608 aa26.32■■□□□ 1.8
U2AF2-204ENST00000587275 AOC3Q16853 763 aa26.32■■□□□ 1.8
U2AF2-204ENST00000587275 EPS15P42566 896 aa26.31■■□□□ 1.8
U2AF2-204ENST00000587275 WDR43Q15061 677 aaKnown RBP eCLIP26.31■■□□□ 1.8
U2AF2-204ENST00000587275 CLEC11AQ9Y240 323 aa26.31■■□□□ 1.8
U2AF2-204ENST00000587275 EIF6P56537 245 aaKnown RBP26.3■■□□□ 1.8
U2AF2-204ENST00000587275 FMR1Q06787 632 aaKnown RBP eCLIP26.3■■□□□ 1.8
U2AF2-204ENST00000587275 HSP90AB3PQ58FF7 597 aa26.3■■□□□ 1.8
U2AF2-204ENST00000587275 PRKRIP1Q9H875 184 aaPredicted RBP26.3■■□□□ 1.8
U2AF2-204ENST00000587275 TMEM88BA6NKF7 163 aa26.29■■□□□ 1.8
U2AF2-204ENST00000587275 PPIP5K2O43314 1243 aa26.29■■□□□ 1.8
U2AF2-204ENST00000587275 GRIPAP1Q4V328 841 aa26.29■■□□□ 1.8
U2AF2-204ENST00000587275 HDGFL1Q5TGJ6 251 aa26.29■■□□□ 1.8
U2AF2-204ENST00000587275 PNMA8AQ86V59 439 aaPredicted RBP26.29■■□□□ 1.8
U2AF2-204ENST00000587275 CNTROBQ8N137 903 aa26.29■■□□□ 1.8
U2AF2-204ENST00000587275 RTFDC1Q9BY42 306 aaPredicted RBP26.29■■□□□ 1.8
U2AF2-204ENST00000587275 TRMT112Q9UI30 125 aaKnown RBP26.29■■□□□ 1.8
U2AF2-204ENST00000587275 MBIPQ9NS73 344 aa26.28■■□□□ 1.8
U2AF2-204ENST00000587275 SH3TC1Q8TE82 1336 aa26.28■■□□□ 1.8
U2AF2-204ENST00000587275 ZNF853P0CG23 659 aa26.27■■□□□ 1.8
U2AF2-204ENST00000587275 VEGFBP49765 207 aa26.27■■□□□ 1.8
U2AF2-204ENST00000587275 CFAP44Q96MT7 982 aa26.27■■□□□ 1.8
U2AF2-204ENST00000587275 ISCA1Q9BUE6 129 aa26.27■■□□□ 1.8
U2AF2-204ENST00000587275 SCN9AQ15858 1988 aa26.27■■□□□ 1.8
U2AF2-204ENST00000587275 HOXB7P09629 217 aa26.26■■□□□ 1.79
U2AF2-204ENST00000587275 NIM1KQ8IY84 436 aa26.26■■□□□ 1.79
U2AF2-204ENST00000587275 PLBD2Q8NHP8 589 aa26.26■■□□□ 1.79
U2AF2-204ENST00000587275 DUSP27Q5VZP5 1158 aa26.25■■□□□ 1.79
U2AF2-204ENST00000587275 SP8Q8IXZ3 490 aa26.25■■□□□ 1.79
U2AF2-204ENST00000587275 SPEF2Q9C093 1822 aa26.25■■□□□ 1.79
U2AF2-204ENST00000587275 POLR2AP24928 1970 aaKnown RBP26.24■■□□□ 1.79
U2AF2-204ENST00000587275 ATP5J2-PTCD1G3V325 749 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms