RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
LAMA3-205ENST00000586709 PDIA6Q15084 440 aa12.99□□□□□ -0.33
LAMA3-205ENST00000586709 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
LAMA3-205ENST00000586709 LRP10Q7Z4F1 713 aa12.99□□□□□ -0.33
LAMA3-205ENST00000586709 CCDC24Q8N4L8 307 aa12.99□□□□□ -0.33
LAMA3-205ENST00000586709 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
LAMA3-205ENST00000586709 HOXB7P09629 217 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 SCUBE2Q9NQ36 999 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
LAMA3-205ENST00000586709 LAMB2P55268 1798 aa12.97□□□□□ -0.33
LAMA3-205ENST00000586709 ANXA1P04083 346 aa12.97□□□□□ -0.33
LAMA3-205ENST00000586709 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
LAMA3-205ENST00000586709 GNAI1P63096 354 aa12.97□□□□□ -0.33
LAMA3-205ENST00000586709 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
LAMA3-205ENST00000586709 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
LAMA3-205ENST00000586709 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.33
LAMA3-205ENST00000586709 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
LAMA3-205ENST00000586709 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
LAMA3-205ENST00000586709 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
LAMA3-205ENST00000586709 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.33
LAMA3-205ENST00000586709 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
LAMA3-205ENST00000586709 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
LAMA3-205ENST00000586709 NYXQ9GZU5 481 aa12.96□□□□□ -0.33
LAMA3-205ENST00000586709 DDX21Q9NR30 783 aaKnown RBP eCLIP12.96□□□□□ -0.33
LAMA3-205ENST00000586709 CEP350Q5VT06 3117 aa12.96□□□□□ -0.34
LAMA3-205ENST00000586709 SRGNP10124 158 aa12.95□□□□□ -0.34
LAMA3-205ENST00000586709 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
LAMA3-205ENST00000586709 DUSP27Q5VZP5 1158 aa12.95□□□□□ -0.34
LAMA3-205ENST00000586709 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
LAMA3-205ENST00000586709 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 GPTP24298 496 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
LAMA3-205ENST00000586709 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
LAMA3-205ENST00000586709 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 MASTLQ96GX5 879 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
LAMA3-205ENST00000586709 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
LAMA3-205ENST00000586709 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
LAMA3-205ENST00000586709 C9orf131Q5VYM1 1079 aa12.93□□□□□ -0.34
LAMA3-205ENST00000586709 ZNF526Q8TF50 670 aaPredicted RBP12.93□□□□□ -0.34
LAMA3-205ENST00000586709 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
LAMA3-205ENST00000586709 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
LAMA3-205ENST00000586709 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
LAMA3-205ENST00000586709 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
LAMA3-205ENST00000586709 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 NPR1P16066 1061 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 RASSF7Q02833 373 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 SUSD4Q5VX71 490 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
LAMA3-205ENST00000586709 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
LAMA3-205ENST00000586709 C21orf2O43822 256 aa12.91□□□□□ -0.34
LAMA3-205ENST00000586709 NTSR2O95665 410 aa12.91□□□□□ -0.34
LAMA3-205ENST00000586709 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
LAMA3-205ENST00000586709 PPP1R42Q7Z4L9 355 aa12.91□□□□□ -0.34
LAMA3-205ENST00000586709 HYPKQ9NX55 129 aa12.91□□□□□ -0.34
LAMA3-205ENST00000586709 IL16Q14005 1332 aa12.9□□□□□ -0.34
LAMA3-205ENST00000586709 NFKBIEO00221 500 aa12.9□□□□□ -0.34
LAMA3-205ENST00000586709 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
LAMA3-205ENST00000586709 LMNB1P20700 586 aa12.9□□□□□ -0.34
LAMA3-205ENST00000586709 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.34
LAMA3-205ENST00000586709 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
LAMA3-205ENST00000586709 TAF1P21675 1872 aa12.9□□□□□ -0.34
LAMA3-205ENST00000586709 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
LAMA3-205ENST00000586709 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
LAMA3-205ENST00000586709 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
LAMA3-205ENST00000586709 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
LAMA3-205ENST00000586709 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
LAMA3-205ENST00000586709 TSR2Q969E8 191 aaKnown RBP12.89□□□□□ -0.35
LAMA3-205ENST00000586709 UTP14AQ9BVJ6 771 aaKnown RBP12.89□□□□□ -0.35
LAMA3-205ENST00000586709 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
LAMA3-205ENST00000586709 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
LAMA3-205ENST00000586709 MYH3P11055 1940 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 PRELPP51888 382 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
LAMA3-205ENST00000586709 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
LAMA3-205ENST00000586709 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
LAMA3-205ENST00000586709 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
LAMA3-205ENST00000586709 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
LAMA3-205ENST00000586709 RPGRQ92834 1020 aaKnown RBP12.87□□□□□ -0.35
LAMA3-205ENST00000586709 TAOK3Q9H2K8 898 aa12.87□□□□□ -0.35
LAMA3-205ENST00000586709 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms