RNA–Protein interactions for RNA: ENST00000586190.1

CACNA1A-207, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-207ENST00000586190 SYNE4Q8N205 404 aa24.09■■□□□ 1.45
CACNA1A-207ENST00000586190 RPGRQ92834 1020 aaKnown RBP24.09■■□□□ 1.45
CACNA1A-207ENST00000586190 CRAMP1Q96RY5 1269 aa24.09■■□□□ 1.45
CACNA1A-207ENST00000586190 IARSP41252 1262 aaKnown RBP24.08■■□□□ 1.45
CACNA1A-207ENST00000586190 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
CACNA1A-207ENST00000586190 PROSER3Q2NL68 480 aa24.08■■□□□ 1.45
CACNA1A-207ENST00000586190 CHADLQ6NUI6 762 aa24.08■■□□□ 1.45
CACNA1A-207ENST00000586190 TRIM35Q9UPQ4 493 aa24.08■■□□□ 1.45
CACNA1A-207ENST00000586190 ANKRD36CQ5JPF3 1778 aa24.08■■□□□ 1.44
CACNA1A-207ENST00000586190 RNF123Q5XPI4 1314 aa24.08■■□□□ 1.44
CACNA1A-207ENST00000586190 FZD9O00144 591 aa24.07■■□□□ 1.44
CACNA1A-207ENST00000586190 SLC10A5Q5PT55 438 aa24.07■■□□□ 1.44
CACNA1A-207ENST00000586190 CCDC146Q8IYE0 955 aa24.07■■□□□ 1.44
CACNA1A-207ENST00000586190 RBM17Q96I25 401 aaKnown RBP24.07■■□□□ 1.44
CACNA1A-207ENST00000586190 HSP90AB3PQ58FF7 597 aa24.06■■□□□ 1.44
CACNA1A-207ENST00000586190 NEUROD2Q15784 382 aa24.05■■□□□ 1.44
CACNA1A-207ENST00000586190 UTP14AQ9BVJ6 771 aaKnown RBP24.05■■□□□ 1.44
CACNA1A-207ENST00000586190 TAF1DQ9H5J8 278 aaPredicted RBP24.05■■□□□ 1.44
CACNA1A-207ENST00000586190 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
CACNA1A-207ENST00000586190 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
CACNA1A-207ENST00000586190 ZNF541Q9H0D2 1346 aa24.05■■□□□ 1.44
CACNA1A-207ENST00000586190 HOXB7P09629 217 aa24.04■■□□□ 1.44
CACNA1A-207ENST00000586190 COPS6Q7L5N1 327 aa24.04■■□□□ 1.44
CACNA1A-207ENST00000586190 LDHDQ86WU2 507 aa24.04■■□□□ 1.44
CACNA1A-207ENST00000586190 NLRP3Q96P20 1036 aa24.04■■□□□ 1.44
CACNA1A-207ENST00000586190 PCNTO95613 3336 aa24.04■■□□□ 1.44
CACNA1A-207ENST00000586190 ANXA1P04083 346 aa24.03■■□□□ 1.44
CACNA1A-207ENST00000586190 PRKRIP1Q9H875 184 aaPredicted RBP24.03■■□□□ 1.44
CACNA1A-207ENST00000586190 POTEIP0CG38 1075 aa24.02■■□□□ 1.44
CACNA1A-207ENST00000586190 POTEJP0CG39 1038 aa24.02■■□□□ 1.44
CACNA1A-207ENST00000586190 C3orf67Q6ZVT6 689 aa24.02■■□□□ 1.44
CACNA1A-207ENST00000586190 GPC2Q8N158 579 aa24.02■■□□□ 1.44
CACNA1A-207ENST00000586190 JDP2Q8WYK2 163 aa24.02■■□□□ 1.44
CACNA1A-207ENST00000586190 PPEF1O14829 653 aaPredicted RBP24.01■■□□□ 1.43
CACNA1A-207ENST00000586190 TCIRG1Q13488 830 aa24.01■■□□□ 1.43
CACNA1A-207ENST00000586190 XAGE3Q8WTP9 111 aa24.01■■□□□ 1.43
CACNA1A-207ENST00000586190 CREBZFQ9NS37 354 aa24.01■■□□□ 1.43
CACNA1A-207ENST00000586190 HACL1Q9UJ83 578 aa24.01■■□□□ 1.43
CACNA1A-207ENST00000586190 NLRP10Q86W26 655 aa24■■□□□ 1.43
CACNA1A-207ENST00000586190 CFAP44Q96MT7 982 aa24■■□□□ 1.43
CACNA1A-207ENST00000586190 LAMB2P55268 1798 aa24■■□□□ 1.43
CACNA1A-207ENST00000586190 ADAMTSL1Q8N6G6 1762 aa24■■□□□ 1.43
CACNA1A-207ENST00000586190 KRT24Q2M2I5 525 aa23.99■■□□□ 1.43
CACNA1A-207ENST00000586190 NECTIN2Q92692 538 aa23.99■■□□□ 1.43
CACNA1A-207ENST00000586190 VPS33BQ9H267 617 aa23.99■■□□□ 1.43
CACNA1A-207ENST00000586190 PASKQ96RG2 1323 aa23.99■■□□□ 1.43
CACNA1A-207ENST00000586190 AIMP1Q12904 312 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-207ENST00000586190 PNMA8AQ86V59 439 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-207ENST00000586190 ATP6V0A2Q9Y487 856 aa23.98■■□□□ 1.43
CACNA1A-207ENST00000586190 LAS1LQ9Y4W2 734 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-207ENST00000586190 COL4A5P29400 1685 aa23.98■■□□□ 1.43
CACNA1A-207ENST00000586190 EPHX2P34913 555 aa23.97■■□□□ 1.43
CACNA1A-207ENST00000586190 EIF6P56537 245 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-207ENST00000586190 CHPF2Q9P2E5 772 aa23.97■■□□□ 1.43
CACNA1A-207ENST00000586190 ABCC4O15439 1325 aa23.96■■□□□ 1.43
CACNA1A-207ENST00000586190 BBOX1O75936 387 aa23.96■■□□□ 1.43
CACNA1A-207ENST00000586190 HDGFL1Q5TGJ6 251 aa23.96■■□□□ 1.43
CACNA1A-207ENST00000586190 PLBD2Q8NHP8 589 aa23.96■■□□□ 1.43
CACNA1A-207ENST00000586190 TMX4Q9H1E5 349 aaPredicted RBP23.96■■□□□ 1.43
CACNA1A-207ENST00000586190 DBF4Q9UBU7 674 aaPredicted RBP23.96■■□□□ 1.43
CACNA1A-207ENST00000586190 SH3TC1Q8TE82 1336 aa23.95■■□□□ 1.42
CACNA1A-207ENST00000586190 ITGBL1O95965 494 aaPredicted RBP23.95■■□□□ 1.42
CACNA1A-207ENST00000586190 ZNF853P0CG23 659 aa23.95■■□□□ 1.42
CACNA1A-207ENST00000586190 LARGE2Q8N3Y3 721 aa23.95■■□□□ 1.42
CACNA1A-207ENST00000586190 RTFDC1Q9BY42 306 aaPredicted RBP23.95■■□□□ 1.42
CACNA1A-207ENST00000586190 ANKRD13DQ6ZTN6 518 aa23.94■■□□□ 1.42
CACNA1A-207ENST00000586190 TRMT112Q9UI30 125 aaKnown RBP23.94■■□□□ 1.42
CACNA1A-207ENST00000586190 EAPPQ56P03 285 aaPredicted RBP23.93■■□□□ 1.42
CACNA1A-207ENST00000586190 SP8Q8IXZ3 490 aa23.93■■□□□ 1.42
CACNA1A-207ENST00000586190 HYPKQ9NX55 129 aa23.93■■□□□ 1.42
CACNA1A-207ENST00000586190 HCLS1P14317 486 aaPredicted RBP23.92■■□□□ 1.42
CACNA1A-207ENST00000586190 DUSP27Q5VZP5 1158 aa23.92■■□□□ 1.42
CACNA1A-207ENST00000586190 SUPT20HQ8NEM7 779 aa23.92■■□□□ 1.42
CACNA1A-207ENST00000586190 ISCA1Q9BUE6 129 aa23.92■■□□□ 1.42
CACNA1A-207ENST00000586190 MBIPQ9NS73 344 aa23.92■■□□□ 1.42
CACNA1A-207ENST00000586190 TCERG1O14776 1098 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-207ENST00000586190 CALD1Q05682 793 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-207ENST00000586190 SLC51AQ86UW1 340 aa23.91■■□□□ 1.42
CACNA1A-207ENST00000586190 NIM1KQ8IY84 436 aa23.91■■□□□ 1.42
CACNA1A-207ENST00000586190 IFT57Q9NWB7 429 aa23.91■■□□□ 1.42
CACNA1A-207ENST00000586190 DDX60Q8IY21 1712 aaKnown RBP23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 PPIP5K2O43314 1243 aa23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 GRAPQ13588 217 aa23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 DDX46Q7L014 1031 aaKnown RBP23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 TMC4Q7Z404 712 aa23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 GRAPLQ8TC17 118 aaPredicted RBP23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 CLEC11AQ9Y240 323 aa23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 LTBP1Q14766 1721 aa23.9■■□□□ 1.42
CACNA1A-207ENST00000586190 APAF1O14727 1248 aa23.89■■□□□ 1.41
CACNA1A-207ENST00000586190 LMOD1P29536 600 aaPredicted RBP23.89■■□□□ 1.41
CACNA1A-207ENST00000586190 SCNN1DP51172 638 aa23.89■■□□□ 1.41
CACNA1A-207ENST00000586190 TRIM28Q13263 835 aaKnown RBP23.89■■□□□ 1.41
CACNA1A-207ENST00000586190 GJA3Q9Y6H8 435 aa23.89■■□□□ 1.41
CACNA1A-207ENST00000586190 CNTNAP1P78357 1384 aa23.89■■□□□ 1.41
CACNA1A-207ENST00000586190 TMEM88BA6NKF7 163 aa23.88■■□□□ 1.41
CACNA1A-207ENST00000586190 GNAI1P63096 354 aa23.88■■□□□ 1.41
CACNA1A-207ENST00000586190 CNTROBQ8N137 903 aa23.88■■□□□ 1.41
CACNA1A-207ENST00000586190 LRRC37AA6NMS7 1700 aa23.87■■□□□ 1.41
CACNA1A-207ENST00000586190 HSPA1AP0DMV8 641 aaKnown RBP23.87■■□□□ 1.41
CACNA1A-207ENST00000586190 HSPA1BP0DMV9 641 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms