RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	GPC2	Q8N158	579 aa		28.94	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	TTLL7	Q6ZT98	887 aa		28.93	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	SNED1	Q8TER0	1413 aa		28.93	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	ERBB4	Q15303	1308 aa		28.93	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	TMEM88B	A6NKF7	163 aa		28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	ITGBL1	O95965	494 aa	Predicted RBP	28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	GPT	P24298	496 aa		28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	HOXA10	P31260	410 aa	Predicted RBP	28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	THUMPD2	Q9BTF0	503 aa	Known RBP	28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	ZBTB3	Q9H5J0	574 aa		28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	RNF123	Q5XPI4	1314 aa		28.92	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	EIF6	P56537	245 aa	Known RBP	28.9	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	RBM17	Q96I25	401 aa	Known RBP	28.9	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	UBN2	Q6ZU65	1347 aa		28.9	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	SUSD4	Q5VX71	490 aa		28.89	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	ZNF34	Q8IZ26	560 aa		28.89	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.88	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	CRAMP1	Q96RY5	1269 aa		28.88	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	PPP1R42	Q7Z4L9	355 aa		28.87	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	CNTROB	Q8N137	903 aa		28.87	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	TSPYL4	Q9UJ04	414 aa		28.86	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	NTSR2	O95665	410 aa		28.85	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	LMOD1	P29536	600 aa	Predicted RBP	28.85	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	PARP10	Q53GL7	1025 aa		28.85	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	MAP1S	Q66K74	1059 aa	Predicted RBP	28.85	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	AIDA	Q96BJ3	306 aa		28.85	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	GJA3	Q9Y6H8	435 aa		28.85	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	ANKRD36C	Q5JPF3	1778 aa		28.84	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	PPEF1	O14829	653 aa	Predicted RBP	28.84	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	VEGFB	P49765	207 aa		28.84	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	LARGE2	Q8N3Y3	721 aa		28.84	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	TMX4	Q9H1E5	349 aa	Predicted RBP	28.84	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	COL4A5	P29400	1685 aa		28.83	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	NLRP3	Q96P20	1036 aa		28.83	■■■□□ 2.21
PLEKHM1-214	ENST00000586084	FOXN1	O15353	648 aa		28.82	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	LTBP1	Q14766	1721 aa		28.81	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	BABAM1	Q9NWV8	329 aa		28.81	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	NIM1K	Q8IY84	436 aa		28.8	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	UTP14A	Q9BVJ6	771 aa	Known RBP	28.8	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	PRDM10	Q9NQV6	1147 aa		28.8	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	RASSF10	A6NK89	507 aa		28.79	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	TCERG1	O14776	1098 aa	Known RBP	28.79	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	EIF2S2	P20042	333 aa	Known RBP	28.79	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	CTCF	P49711	727 aa	Predicted RBP	28.79	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	RIPK4	P57078	832 aa		28.79	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	DEFB115	Q30KQ5	88 aa		28.79	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	LAMB2	P55268	1798 aa		28.78	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	LMOD3	Q0VAK6	560 aa		28.78	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	VPS33B	Q9H267	617 aa		28.78	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	TRPM7	Q96QT4	1865 aa		28.78	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	SCNN1D	P51172	638 aa		28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	PDIA6	Q15084	440 aa		28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	SLC10A5	Q5PT55	438 aa		28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	C3orf67	Q6ZVT6	689 aa		28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	LRP10	Q7Z4F1	713 aa		28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	ABT1	Q9ULW3	272 aa	Known RBP	28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	ATP6V0A2	Q9Y487	856 aa		28.77	■■■□□ 2.2
PLEKHM1-214	ENST00000586084	PPIP5K2	O43314	1243 aa		28.76	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	HSP90AB3P	Q58FF7	597 aa		28.75	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	USP50	Q70EL3	339 aa	Predicted RBP	28.75	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	SUPT20H	Q8NEM7	779 aa		28.75	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	WBP1L	Q9NX94	342 aa		28.75	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	EPS15	P42566	896 aa		28.74	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	RALBP1	Q15311	655 aa		28.73	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	PROSER3	Q2NL68	480 aa		28.73	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	ABCC4	O15439	1325 aa		28.72	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	WDR33	Q9C0J8	1336 aa	Known RBP	28.72	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	AOC3	Q16853	763 aa		28.72	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	BBOX1	O75936	387 aa		28.71	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	ANXA1	P04083	346 aa		28.71	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	TMPO	P42166	694 aa	Known RBP	28.71	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	MAP2K1	Q02750	393 aa	Predicted RBP	28.71	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	SLC51A	Q86UW1	340 aa		28.71	■■■□□ 2.19
PLEKHM1-214	ENST00000586084	COPS6	Q7L5N1	327 aa		28.7	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.7	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	ZNRF3	Q9ULT6	936 aa		28.7	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	AIMP1	Q12904	312 aa	Known RBP	28.69	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	NLRP10	Q86W26	655 aa		28.69	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	SP8	Q8IXZ3	490 aa		28.69	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	XAGE3	Q8WTP9	111 aa		28.69	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	LBX1	P52954	281 aa		28.68	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	DPP8	Q6V1X1	898 aa	Predicted RBP	28.68	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	NECTIN2	Q92692	538 aa		28.68	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	ADARB2	Q9NS39	739 aa	Known RBP	28.68	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	GPRC5D	Q9NZD1	345 aa		28.68	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	THSD7B	Q9C0I4	1608 aa		28.68	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	ECE1	P42892	770 aa		28.67	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	TCIRG1	Q13488	830 aa		28.67	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	DDX46	Q7L014	1031 aa	Known RBP	28.67	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	MPND	Q8N594	471 aa		28.67	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	TRMT112	Q9UI30	125 aa	Known RBP	28.67	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	CXCL9	Q07325	125 aa		28.66	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	SH3TC1	Q8TE82	1336 aa		28.66	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	HCLS1	P14317	486 aa	Predicted RBP	28.65	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.65	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	TAF1	P21675	1872 aa		28.65	■■■□□ 2.18
PLEKHM1-214	ENST00000586084	CDHR2	Q9BYE9	1310 aa		28.64	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	FMR1	Q06787	632 aa	Known RBP eCLIP	28.63	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	KIAA2012	Q0VF49	1180 aa		28.63	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms