RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 UTP14AQ9BVJ6 771 aaKnown RBP22.2■■□□□ 1.14
MBD3-204ENST00000585967 LAS1LQ9Y4W2 734 aaKnown RBP22.2■■□□□ 1.14
MBD3-204ENST00000585967 NTSR2O95665 410 aa22.19■■□□□ 1.14
MBD3-204ENST00000585967 SUSD4Q5VX71 490 aa22.19■■□□□ 1.14
MBD3-204ENST00000585967 DNAJC5GQ8N7S2 189 aa22.19■■□□□ 1.14
MBD3-204ENST00000585967 PRKRIP1Q9H875 184 aaPredicted RBP22.19■■□□□ 1.14
MBD3-204ENST00000585967 ZNF277Q9NRM2 450 aaPredicted RBP22.19■■□□□ 1.14
MBD3-204ENST00000585967 CHL1O00533 1208 aa22.18■■□□□ 1.14
MBD3-204ENST00000585967 DDNO94850 711 aaPredicted RBP22.18■■□□□ 1.14
MBD3-204ENST00000585967 L3MBTL3Q96JM7 780 aaPredicted RBP22.18■■□□□ 1.14
MBD3-204ENST00000585967 CRAMP1Q96RY5 1269 aa22.18■■□□□ 1.14
MBD3-204ENST00000585967 DDX21Q9NR30 783 aaKnown RBP eCLIP22.18■■□□□ 1.14
MBD3-204ENST00000585967 PDIA6Q15084 440 aa22.17■■□□□ 1.14
MBD3-204ENST00000585967 HDGFL1Q5TGJ6 251 aa22.17■■□□□ 1.14
MBD3-204ENST00000585967 CHADLQ6NUI6 762 aa22.17■■□□□ 1.14
MBD3-204ENST00000585967 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
MBD3-204ENST00000585967 PPEF1O14829 653 aaPredicted RBP22.16■■□□□ 1.14
MBD3-204ENST00000585967 AIMP1Q12904 312 aaKnown RBP22.16■■□□□ 1.14
MBD3-204ENST00000585967 COPS6Q7L5N1 327 aa22.16■■□□□ 1.14
MBD3-204ENST00000585967 SYNE4Q8N205 404 aa22.16■■□□□ 1.14
MBD3-204ENST00000585967 POTECB2RU33 542 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 LRP10Q7Z4F1 713 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 XAGE3Q8WTP9 111 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 NECTIN2Q92692 538 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 CFAP44Q96MT7 982 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
MBD3-204ENST00000585967 ANXA1P04083 346 aa22.14■■□□□ 1.13
MBD3-204ENST00000585967 EIF6P56537 245 aaKnown RBP22.14■■□□□ 1.13
MBD3-204ENST00000585967 PROSER3Q2NL68 480 aa22.14■■□□□ 1.13
MBD3-204ENST00000585967 LDHDQ86WU2 507 aa22.14■■□□□ 1.13
MBD3-204ENST00000585967 DBF4Q9UBU7 674 aaPredicted RBP22.14■■□□□ 1.13
MBD3-204ENST00000585967 DDX60Q8IY21 1712 aaKnown RBP22.14■■□□□ 1.13
MBD3-204ENST00000585967 SNED1Q8TER0 1413 aa22.14■■□□□ 1.13
MBD3-204ENST00000585967 GPC2Q8N158 579 aa22.13■■□□□ 1.13
MBD3-204ENST00000585967 HACL1Q9UJ83 578 aa22.13■■□□□ 1.13
MBD3-204ENST00000585967 SH3TC1Q8TE82 1336 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 FZD9O00144 591 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 HTRA3P83110 453 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 TCIRG1Q13488 830 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 SLC10A5Q5PT55 438 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 OLFM4Q6UX06 510 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 PNMA8AQ86V59 439 aaPredicted RBP22.12■■□□□ 1.13
MBD3-204ENST00000585967 JMYQ8N9B5 988 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 SUPT20HQ8NEM7 779 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 HYPKQ9NX55 129 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
MBD3-204ENST00000585967 TRMT112Q9UI30 125 aaKnown RBP22.12■■□□□ 1.13
MBD3-204ENST00000585967 ZNF541Q9H0D2 1346 aa22.11■■□□□ 1.13
MBD3-204ENST00000585967 GNAI1P63096 354 aa22.11■■□□□ 1.13
MBD3-204ENST00000585967 NLRP10Q86W26 655 aa22.11■■□□□ 1.13
MBD3-204ENST00000585967 LARGE2Q8N3Y3 721 aa22.11■■□□□ 1.13
MBD3-204ENST00000585967 TAF1DQ9H5J8 278 aaPredicted RBP22.11■■□□□ 1.13
MBD3-204ENST00000585967 ADAMTSL1Q8N6G6 1762 aa22.1■■□□□ 1.13
MBD3-204ENST00000585967 LMOD1P29536 600 aaPredicted RBP22.1■■□□□ 1.13
MBD3-204ENST00000585967 DDX46Q7L014 1031 aaKnown RBP22.1■■□□□ 1.13
MBD3-204ENST00000585967 PLBD2Q8NHP8 589 aa22.1■■□□□ 1.13
MBD3-204ENST00000585967 VPS33BQ9H267 617 aa22.1■■□□□ 1.13
MBD3-204ENST00000585967 LRRC37AA6NMS7 1700 aa22.09■■□□□ 1.13
MBD3-204ENST00000585967 EAPPQ56P03 285 aaPredicted RBP22.09■■□□□ 1.13
MBD3-204ENST00000585967 NIM1KQ8IY84 436 aa22.09■■□□□ 1.13
MBD3-204ENST00000585967 CREBZFQ9NS37 354 aa22.09■■□□□ 1.13
MBD3-204ENST00000585967 IFT57Q9NWB7 429 aa22.09■■□□□ 1.13
MBD3-204ENST00000585967 ABCC4O15439 1325 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 BBOX1O75936 387 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 EPHX2P34913 555 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 ANKRD13DQ6ZTN6 518 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 TMC4Q7Z404 712 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 CLEC11AQ9Y240 323 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 ATP6V0A2Q9Y487 856 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 TAF1P21675 1872 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 PCNTO95613 3336 aa22.08■■□□□ 1.13
MBD3-204ENST00000585967 CACNA1FO60840 1977 aa22.07■■□□□ 1.12
MBD3-204ENST00000585967 HSP90B1P14625 803 aaKnown RBP22.07■■□□□ 1.12
MBD3-204ENST00000585967 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
MBD3-204ENST00000585967 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
MBD3-204ENST00000585967 DUSP27Q5VZP5 1158 aa22.07■■□□□ 1.12
MBD3-204ENST00000585967 MBIPQ9NS73 344 aa22.07■■□□□ 1.12
MBD3-204ENST00000585967 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
MBD3-204ENST00000585967 PPIP5K2O43314 1243 aa22.06■■□□□ 1.12
MBD3-204ENST00000585967 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
MBD3-204ENST00000585967 TRPM7Q96QT4 1865 aa22.06■■□□□ 1.12
MBD3-204ENST00000585967 APAF1O14727 1248 aa22.05■■□□□ 1.12
MBD3-204ENST00000585967 DPP8Q6V1X1 898 aaPredicted RBP22.05■■□□□ 1.12
MBD3-204ENST00000585967 GJA3Q9Y6H8 435 aa22.05■■□□□ 1.12
MBD3-204ENST00000585967 MYH3P11055 1940 aa22.04■■□□□ 1.12
MBD3-204ENST00000585967 HCLS1P14317 486 aaPredicted RBP22.04■■□□□ 1.12
MBD3-204ENST00000585967 C3orf67Q6ZVT6 689 aa22.04■■□□□ 1.12
MBD3-204ENST00000585967 SP8Q8IXZ3 490 aa22.04■■□□□ 1.12
MBD3-204ENST00000585967 POTEIP0CG38 1075 aa22.03■■□□□ 1.12
MBD3-204ENST00000585967 POTEJP0CG39 1038 aa22.03■■□□□ 1.12
MBD3-204ENST00000585967 GRAPQ13588 217 aa22.03■■□□□ 1.12
MBD3-204ENST00000585967 GRAPLQ8TC17 118 aaPredicted RBP22.03■■□□□ 1.12
MBD3-204ENST00000585967 COL4A5P29400 1685 aa22.02■■□□□ 1.12
MBD3-204ENST00000585967 RIC3Q7Z5B4 369 aa22.02■■□□□ 1.12
MBD3-204ENST00000585967 MPNDQ8N594 471 aa22.02■■□□□ 1.12
MBD3-204ENST00000585967 DDX58O95786 925 aaKnown RBP22.01■■□□□ 1.11
MBD3-204ENST00000585967 ZNF853P0CG23 659 aa22.01■■□□□ 1.11
MBD3-204ENST00000585967 PASKQ96RG2 1323 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms