RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 MYL6BP14649 208 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 GPTP24298 496 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 CC2D2BQ6DHV5 1058 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 DICER1Q9UPY3 1922 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 LBX1P52954 281 aa17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 PPEF1O14829 653 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-234ENST00000584525 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
CDK5RAP3-234ENST00000584525 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-234ENST00000584525 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.34
CDK5RAP3-234ENST00000584525 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
CDK5RAP3-234ENST00000584525 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDK5RAP3-234ENST00000584525 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-234ENST00000584525 EPS15P42566 896 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 MAP2K1Q02750 393 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ZNF34Q8IZ26 560 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ARFGEF2Q9Y6D5 1785 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NTSR2O95665 410 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SCNN1DP51172 638 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SCN4AP35499 1836 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 HSPA8P11142 646 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 FMR1Q06787 632 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 GRM1Q13255 1194 aa17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
CDK5RAP3-234ENST00000584525 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-234ENST00000584525 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
CDK5RAP3-234ENST00000584525 TRAF5O00463 557 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 AOC3Q16853 763 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 CAPNS2Q96L46 248 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 COL4A5P29400 1685 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ECE1P42892 770 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CYP4F22Q6NT55 531 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 GPR101Q96P66 508 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 BEGAINQ9BUH8 593 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ADAMTSL1Q8N6G6 1762 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 SLC10A5Q5PT55 438 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CST9Q5W186 159 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ANXA1P04083 346 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CXCL9Q07325 125 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ABHD8Q96I13 439 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 BBOX1O75936 387 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 PDIA6Q15084 440 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ABCC4O15439 1325 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 RIPK4P57078 832 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 MPNDQ8N594 471 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms