RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 MYL6BP14649 208 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 GPTP24298 496 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 CC2D2BQ6DHV5 1058 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
CDK5RAP3-234ENST00000584525 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-234ENST00000584525 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 DICER1Q9UPY3 1922 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-234ENST00000584525 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 LBX1P52954 281 aa17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-234ENST00000584525 PPEF1O14829 653 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-234ENST00000584525 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
CDK5RAP3-234ENST00000584525 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-234ENST00000584525 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.34
CDK5RAP3-234ENST00000584525 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
CDK5RAP3-234ENST00000584525 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDK5RAP3-234ENST00000584525 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-234ENST00000584525 EPS15P42566 896 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 MAP2K1Q02750 393 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ZNF34Q8IZ26 560 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ARFGEF2Q9Y6D5 1785 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NTSR2O95665 410 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SCNN1DP51172 638 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PLEKHF1Q96S99 279 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 SCN4AP35499 1836 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
CDK5RAP3-234ENST00000584525 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 HSPA8P11142 646 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 FMR1Q06787 632 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 GRM1Q13255 1194 aa17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-234ENST00000584525 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
CDK5RAP3-234ENST00000584525 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-234ENST00000584525 TSPYL4Q9UJ04 414 aa17.16■□□□□ 0.34
CDK5RAP3-234ENST00000584525 TRAF5O00463 557 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 EIF2S2P20042 333 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 AOC3Q16853 763 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 CAPNS2Q96L46 248 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
CDK5RAP3-234ENST00000584525 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 COL4A5P29400 1685 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ECE1P42892 770 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CYP4F22Q6NT55 531 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 GPR101Q96P66 508 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 BEGAINQ9BUH8 593 aa17.14■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ADAMTSL1Q8N6G6 1762 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 SLC10A5Q5PT55 438 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CST9Q5W186 159 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ANXA1P04083 346 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CXCL9Q07325 125 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ABHD8Q96I13 439 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
CDK5RAP3-234ENST00000584525 BBOX1O75936 387 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 PDIA6Q15084 440 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 ABCC4O15439 1325 aa17.11■□□□□ 0.33
CDK5RAP3-234ENST00000584525 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 RIPK4P57078 832 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 MPNDQ8N594 471 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
CDK5RAP3-234ENST00000584525 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-234ENST00000584525 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms