RNA–Protein interactions for RNA: ENST00000581516.1

SLC46A1-202, Transcript of solute carrier family 46 member 1, humanhuman

TSL 5

Gene SLC46A1, Length 844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-202ENST00000581516 TAF1DQ9H5J8 278 aaPredicted RBP13.77□□□□□ -0.21
SLC46A1-202ENST00000581516 SNED1Q8TER0 1413 aa13.76□□□□□ -0.21
SLC46A1-202ENST00000581516 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
SLC46A1-202ENST00000581516 LRP10Q7Z4F1 713 aa13.76□□□□□ -0.21
SLC46A1-202ENST00000581516 ZNF34Q8IZ26 560 aa13.76□□□□□ -0.21
SLC46A1-202ENST00000581516 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
SLC46A1-202ENST00000581516 MKRN1Q9UHC7 482 aaKnown RBP13.76□□□□□ -0.21
SLC46A1-202ENST00000581516 IQCA1LA6NCM1 817 aa13.75□□□□□ -0.21
SLC46A1-202ENST00000581516 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
SLC46A1-202ENST00000581516 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
SLC46A1-202ENST00000581516 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
SLC46A1-202ENST00000581516 SCN4AP35499 1836 aa13.75□□□□□ -0.21
SLC46A1-202ENST00000581516 IBTKQ9P2D0 1353 aaPredicted RBP13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 PPEF1O14829 653 aaPredicted RBP13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 HSPA1AP0DMV8 641 aaKnown RBP13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 HSPA1BP0DMV9 641 aaKnown RBP13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
SLC46A1-202ENST00000581516 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 FZD9O00144 591 aa13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 HOXA10P31260 410 aaPredicted RBP13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 RBM17Q96I25 401 aaKnown RBP13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 PSMD1Q99460 953 aa13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 HACL1Q9UJ83 578 aa13.73□□□□□ -0.21
SLC46A1-202ENST00000581516 CAPN15O75808 1086 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 HCLS1P14317 486 aaPredicted RBP13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 EPHX2P34913 555 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 UTP14AQ9BVJ6 771 aaKnown RBP13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 ANKRD36CQ5JPF3 1778 aa13.72□□□□□ -0.21
SLC46A1-202ENST00000581516 LAMB2P55268 1798 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 ABCC4O15439 1325 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 LTBP1Q14766 1721 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 WDR43Q15061 677 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 PARP10Q53GL7 1025 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 LARGE2Q8N3Y3 721 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
SLC46A1-202ENST00000581516 TAF1P21675 1872 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 GPC2Q8N158 579 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 CHPF2Q9P2E5 772 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 ADAMTSL1Q8N6G6 1762 aa13.7□□□□□ -0.22
SLC46A1-202ENST00000581516 CHL1O00533 1208 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 PPIP5K2O43314 1243 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 AOC3Q16853 763 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 TNS4Q8IZW8 715 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 RUNDC1Q96C34 613 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 BABAM1Q9NWV8 329 aa13.69□□□□□ -0.22
SLC46A1-202ENST00000581516 EPS15P42566 896 aa13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 HDGFL1Q5TGJ6 251 aa13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 NIM1KQ8IY84 436 aa13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 TRMT112Q9UI30 125 aaKnown RBP13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 CNTNAP1P78357 1384 aa13.68□□□□□ -0.22
SLC46A1-202ENST00000581516 TMEM88BA6NKF7 163 aa13.67□□□□□ -0.22
SLC46A1-202ENST00000581516 SCNN1DP51172 638 aa13.67□□□□□ -0.22
SLC46A1-202ENST00000581516 TCIRG1Q13488 830 aa13.67□□□□□ -0.22
SLC46A1-202ENST00000581516 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
SLC46A1-202ENST00000581516 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
SLC46A1-202ENST00000581516 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
SLC46A1-202ENST00000581516 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
SLC46A1-202ENST00000581516 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
SLC46A1-202ENST00000581516 VEGFBP49765 207 aa13.66□□□□□ -0.22
SLC46A1-202ENST00000581516 HSP90AB3PQ58FF7 597 aa13.66□□□□□ -0.22
SLC46A1-202ENST00000581516 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
SLC46A1-202ENST00000581516 PNMA8AQ86V59 439 aaPredicted RBP13.66□□□□□ -0.22
SLC46A1-202ENST00000581516 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
SLC46A1-202ENST00000581516 TMX4Q9H1E5 349 aaPredicted RBP13.65□□□□□ -0.22
SLC46A1-202ENST00000581516 COL4A1P02462 1669 aa13.65□□□□□ -0.22
SLC46A1-202ENST00000581516 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 FOXN1O15353 648 aa13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 GRAPQ13588 217 aa13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 DDX46Q7L014 1031 aaKnown RBP13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 GRAPLQ8TC17 118 aaPredicted RBP13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 FAM89AQ96GI7 184 aa13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 MBIPQ9NS73 344 aa13.64□□□□□ -0.23
SLC46A1-202ENST00000581516 TRAF5O00463 557 aa13.63□□□□□ -0.23
SLC46A1-202ENST00000581516 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
SLC46A1-202ENST00000581516 APAF1O14727 1248 aa13.63□□□□□ -0.23
SLC46A1-202ENST00000581516 RAD17O75943 681 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms