RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 LAS1LQ9Y4W2 734 aaKnown RBP22.88■■□□□ 1.25
CSNK1D-214ENST00000580565 IARSP41252 1262 aaKnown RBP22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 KRT24Q2M2I5 525 aa22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 IFFO2Q5TF58 517 aa22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 RBM17Q96I25 401 aaKnown RBP22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 L3MBTL3Q96JM7 780 aaPredicted RBP22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 CRAMP1Q96RY5 1269 aa22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 PSMD1Q99460 953 aa22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 UTP14AQ9BVJ6 771 aaKnown RBP22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 PRKRIP1Q9H875 184 aaPredicted RBP22.87■■□□□ 1.25
CSNK1D-214ENST00000580565 IQCA1LA6NCM1 817 aa22.86■■□□□ 1.25
CSNK1D-214ENST00000580565 AIMP1Q12904 312 aaKnown RBP22.86■■□□□ 1.25
CSNK1D-214ENST00000580565 CHADLQ6NUI6 762 aa22.86■■□□□ 1.25
CSNK1D-214ENST00000580565 C3orf67Q6ZVT6 689 aa22.86■■□□□ 1.25
CSNK1D-214ENST00000580565 JMYQ8N9B5 988 aa22.86■■□□□ 1.25
CSNK1D-214ENST00000580565 XAGE3Q8WTP9 111 aa22.86■■□□□ 1.25
CSNK1D-214ENST00000580565 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
CSNK1D-214ENST00000580565 NLRP3Q96P20 1036 aa22.85■■□□□ 1.25
CSNK1D-214ENST00000580565 DDX21Q9NR30 783 aaKnown RBP eCLIP22.85■■□□□ 1.25
CSNK1D-214ENST00000580565 NUP98P52948 1817 aa22.85■■□□□ 1.25
CSNK1D-214ENST00000580565 ZNF541Q9H0D2 1346 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 DICER1Q9UPY3 1922 aaKnown RBP22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 SNED1Q8TER0 1413 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 CACNA1SQ13698 1873 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 FZD9O00144 591 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 POTEIP0CG38 1075 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 POTEJP0CG39 1038 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 GRIPAP1Q4V328 841 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 HSP90AB3PQ58FF7 597 aa22.84■■□□□ 1.25
CSNK1D-214ENST00000580565 TAF1DQ9H5J8 278 aaPredicted RBP22.83■■□□□ 1.25
CSNK1D-214ENST00000580565 PPEF1O14829 653 aaPredicted RBP22.82■■□□□ 1.24
CSNK1D-214ENST00000580565 TCIRG1Q13488 830 aa22.82■■□□□ 1.24
CSNK1D-214ENST00000580565 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
CSNK1D-214ENST00000580565 JDP2Q8WYK2 163 aa22.82■■□□□ 1.24
CSNK1D-214ENST00000580565 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
CSNK1D-214ENST00000580565 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
CSNK1D-214ENST00000580565 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
CSNK1D-214ENST00000580565 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
CSNK1D-214ENST00000580565 HOXB7P09629 217 aa22.8■■□□□ 1.24
CSNK1D-214ENST00000580565 HDGFL1Q5TGJ6 251 aa22.8■■□□□ 1.24
CSNK1D-214ENST00000580565 LDHDQ86WU2 507 aa22.8■■□□□ 1.24
CSNK1D-214ENST00000580565 HACL1Q9UJ83 578 aa22.8■■□□□ 1.24
CSNK1D-214ENST00000580565 SLC51AQ86UW1 340 aa22.79■■□□□ 1.24
CSNK1D-214ENST00000580565 GPC2Q8N158 579 aa22.79■■□□□ 1.24
CSNK1D-214ENST00000580565 TRMT112Q9UI30 125 aaKnown RBP22.79■■□□□ 1.24
CSNK1D-214ENST00000580565 TMX4Q9H1E5 349 aaPredicted RBP22.78■■□□□ 1.24
CSNK1D-214ENST00000580565 DBF4Q9UBU7 674 aaPredicted RBP22.78■■□□□ 1.24
CSNK1D-214ENST00000580565 ATP6V0A2Q9Y487 856 aa22.78■■□□□ 1.24
CSNK1D-214ENST00000580565 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 EPHX2P34913 555 aa22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 EAPPQ56P03 285 aaPredicted RBP22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 DUSP27Q5VZP5 1158 aa22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 LARGE2Q8N3Y3 721 aa22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 PLBD2Q8NHP8 589 aa22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 MBIPQ9NS73 344 aa22.77■■□□□ 1.24
CSNK1D-214ENST00000580565 APAF1O14727 1248 aa22.76■■□□□ 1.23
CSNK1D-214ENST00000580565 EIF6P56537 245 aaKnown RBP22.76■■□□□ 1.23
CSNK1D-214ENST00000580565 ANKRD13DQ6ZTN6 518 aa22.76■■□□□ 1.23
CSNK1D-214ENST00000580565 CREBZFQ9NS37 354 aa22.76■■□□□ 1.23
CSNK1D-214ENST00000580565 ABCC4O15439 1325 aa22.76■■□□□ 1.23
CSNK1D-214ENST00000580565 SH3TC1Q8TE82 1336 aa22.76■■□□□ 1.23
CSNK1D-214ENST00000580565 BBOX1O75936 387 aa22.75■■□□□ 1.23
CSNK1D-214ENST00000580565 ZNF853P0CG23 659 aa22.75■■□□□ 1.23
CSNK1D-214ENST00000580565 PNMA8AQ86V59 439 aaPredicted RBP22.75■■□□□ 1.23
CSNK1D-214ENST00000580565 HYPKQ9NX55 129 aa22.75■■□□□ 1.23
CSNK1D-214ENST00000580565 CLEC11AQ9Y240 323 aa22.74■■□□□ 1.23
CSNK1D-214ENST00000580565 GJA3Q9Y6H8 435 aa22.74■■□□□ 1.23
CSNK1D-214ENST00000580565 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
CSNK1D-214ENST00000580565 SP8Q8IXZ3 490 aa22.73■■□□□ 1.23
CSNK1D-214ENST00000580565 IFT57Q9NWB7 429 aa22.73■■□□□ 1.23
CSNK1D-214ENST00000580565 COL4A5P29400 1685 aa22.73■■□□□ 1.23
CSNK1D-214ENST00000580565 PASKQ96RG2 1323 aa22.73■■□□□ 1.23
CSNK1D-214ENST00000580565 ITGBL1O95965 494 aaPredicted RBP22.72■■□□□ 1.23
CSNK1D-214ENST00000580565 DDX46Q7L014 1031 aaKnown RBP22.72■■□□□ 1.23
CSNK1D-214ENST00000580565 NIM1KQ8IY84 436 aa22.72■■□□□ 1.23
CSNK1D-214ENST00000580565 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
CSNK1D-214ENST00000580565 ISCA1Q9BUE6 129 aa22.72■■□□□ 1.23
CSNK1D-214ENST00000580565 VPS33BQ9H267 617 aa22.72■■□□□ 1.23
CSNK1D-214ENST00000580565 PPIP5K2O43314 1243 aa22.71■■□□□ 1.23
CSNK1D-214ENST00000580565 GNAI1P63096 354 aa22.71■■□□□ 1.23
CSNK1D-214ENST00000580565 SUPT20HQ8NEM7 779 aa22.71■■□□□ 1.23
CSNK1D-214ENST00000580565 RTFDC1Q9BY42 306 aaPredicted RBP22.71■■□□□ 1.23
CSNK1D-214ENST00000580565 SCN4AP35499 1836 aa22.71■■□□□ 1.23
CSNK1D-214ENST00000580565 ATP5J2-PTCD1G3V325 749 aa22.7■■□□□ 1.22
CSNK1D-214ENST00000580565 GRAPQ13588 217 aa22.7■■□□□ 1.22
CSNK1D-214ENST00000580565 AOC3Q16853 763 aa22.7■■□□□ 1.22
CSNK1D-214ENST00000580565 GRAPLQ8TC17 118 aaPredicted RBP22.7■■□□□ 1.22
CSNK1D-214ENST00000580565 LMOD1P29536 600 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-214ENST00000580565 DPP8Q6V1X1 898 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-214ENST00000580565 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
CSNK1D-214ENST00000580565 MKRN1Q9UHC7 482 aaKnown RBP22.69■■□□□ 1.22
CSNK1D-214ENST00000580565 PCNTO95613 3336 aa22.68■■□□□ 1.22
CSNK1D-214ENST00000580565 ELL2O00472 640 aaPredicted RBP22.68■■□□□ 1.22
CSNK1D-214ENST00000580565 SCNN1DP51172 638 aa22.68■■□□□ 1.22
CSNK1D-214ENST00000580565 MAP1SQ66K74 1059 aaPredicted RBP22.68■■□□□ 1.22
CSNK1D-214ENST00000580565 CNTROBQ8N137 903 aa22.68■■□□□ 1.22
CSNK1D-214ENST00000580565 MPNDQ8N594 471 aa22.68■■□□□ 1.22
CSNK1D-214ENST00000580565 EPS15P42566 896 aa22.67■■□□□ 1.22
CSNK1D-214ENST00000580565 TRIM28Q13263 835 aaKnown RBP22.67■■□□□ 1.22
CSNK1D-214ENST00000580565 ZNRF3Q9ULT6 936 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms