RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 PITPNM2Q9BZ72 1349 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 RASSF10A6NK89 507 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 KCNA3P22001 575 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 FXR1P51114 621 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX11-206ENST00000580219 DEFB115Q30KQ5 88 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 API5Q9BZZ5 524 aaKnown RBP12.43□□□□□ -0.42
SNX11-206ENST00000580219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX11-206ENST00000580219 TSPYL4Q9UJ04 414 aa12.43□□□□□ -0.42
SNX11-206ENST00000580219 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
SNX11-206ENST00000580219 AKAP4Q5JQC9 854 aa12.42□□□□□ -0.42
SNX11-206ENST00000580219 ZCRB1Q8TBF4 217 aaKnown RBP12.42□□□□□ -0.42
SNX11-206ENST00000580219 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
SNX11-206ENST00000580219 PIM2Q9P1W9 311 aa12.42□□□□□ -0.42
SNX11-206ENST00000580219 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
SNX11-206ENST00000580219 ABCC4O15439 1325 aa12.41□□□□□ -0.42
SNX11-206ENST00000580219 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
SNX11-206ENST00000580219 SLC17A8Q8NDX2 589 aa12.41□□□□□ -0.42
SNX11-206ENST00000580219 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
SNX11-206ENST00000580219 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
SNX11-206ENST00000580219 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
SNX11-206ENST00000580219 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
SNX11-206ENST00000580219 PTPRCP08575 1304 aa12.4□□□□□ -0.42
SNX11-206ENST00000580219 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
SNX11-206ENST00000580219 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
SNX11-206ENST00000580219 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
SNX11-206ENST00000580219 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
SNX11-206ENST00000580219 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
SNX11-206ENST00000580219 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
SNX11-206ENST00000580219 CYP27B1O15528 508 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 LMNB1P20700 586 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 TMEM57Q8N5G2 664 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
SNX11-206ENST00000580219 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
SNX11-206ENST00000580219 HOXB7P09629 217 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 PHKG2P15735 406 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 HMGB2P26583 209 aaKnown RBP12.38□□□□□ -0.43
SNX11-206ENST00000580219 SSFA2P28290 1259 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
SNX11-206ENST00000580219 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 PCDHB15Q9Y5E8 787 aa12.38□□□□□ -0.43
SNX11-206ENST00000580219 IGHDP01880 384 aa12.37□□□□□ -0.43
SNX11-206ENST00000580219 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
SNX11-206ENST00000580219 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
SNX11-206ENST00000580219 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
SNX11-206ENST00000580219 MAP3K13O43283 966 aa12.36□□□□□ -0.43
SNX11-206ENST00000580219 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
SNX11-206ENST00000580219 INTS3Q68E01 1043 aaKnown RBP12.36□□□□□ -0.43
SNX11-206ENST00000580219 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
SNX11-206ENST00000580219 RNMTO43148 476 aaKnown RBP12.35□□□□□ -0.43
SNX11-206ENST00000580219 GRM1Q13255 1194 aa12.35□□□□□ -0.43
SNX11-206ENST00000580219 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
SNX11-206ENST00000580219 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
SNX11-206ENST00000580219 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
SNX11-206ENST00000580219 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
SNX11-206ENST00000580219 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
SNX11-206ENST00000580219 SCN4AP35499 1836 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 UNC80Q8N2C7 3258 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 ZBTB7BO15156 539 aaPredicted RBP12.34□□□□□ -0.43
SNX11-206ENST00000580219 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
SNX11-206ENST00000580219 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
SNX11-206ENST00000580219 TEFQ10587 303 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 KRT24Q2M2I5 525 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 MPRIPQ6WCQ1 1025 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
SNX11-206ENST00000580219 CACNA1FO60840 1977 aa12.33□□□□□ -0.44
SNX11-206ENST00000580219 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
SNX11-206ENST00000580219 MRC1P22897 1456 aa12.33□□□□□ -0.44
SNX11-206ENST00000580219 EIF4A1P60842 406 aaKnown RBP12.32□□□□□ -0.44
SNX11-206ENST00000580219 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
SNX11-206ENST00000580219 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
SNX11-206ENST00000580219 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
SNX11-206ENST00000580219 SIPA1L3O60292 1781 aaPredicted RBP12.32□□□□□ -0.44
SNX11-206ENST00000580219 ITGB4P16144 1822 aa12.32□□□□□ -0.44
SNX11-206ENST00000580219 ADAMTSL1Q8N6G6 1762 aa12.31□□□□□ -0.44
SNX11-206ENST00000580219 PDE4AP27815 886 aa12.31□□□□□ -0.44
SNX11-206ENST00000580219 CHRNA5P30532 468 aa12.31□□□□□ -0.44
SNX11-206ENST00000580219 CCT4P50991 539 aaKnown RBP12.31□□□□□ -0.44
SNX11-206ENST00000580219 CYP4F22Q6NT55 531 aa12.31□□□□□ -0.44
SNX11-206ENST00000580219 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 GNPATO15228 680 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 CA12O43570 354 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 ECE1P42892 770 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 GSE1Q14687 1217 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
SNX11-206ENST00000580219 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
SNX11-206ENST00000580219 ERVV-2B6SEH9 535 aa12.29□□□□□ -0.44
SNX11-206ENST00000580219 HDGFL1Q5TGJ6 251 aa12.29□□□□□ -0.44
SNX11-206ENST00000580219 NLGN1Q8N2Q7 840 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms