RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 EIF4A1P60842 406 aaKnown RBP11.34□□□□□ -0.59
CASC3-206ENST00000579238 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
CASC3-206ENST00000579238 RPGRQ92834 1020 aaKnown RBP11.34□□□□□ -0.59
CASC3-206ENST00000579238 RIC1Q4ADV7 1423 aa11.34□□□□□ -0.59
CASC3-206ENST00000579238 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
CASC3-206ENST00000579238 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
CASC3-206ENST00000579238 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
CASC3-206ENST00000579238 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
CASC3-206ENST00000579238 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
CASC3-206ENST00000579238 RRP7AQ9Y3A4 280 aaKnown RBP11.33□□□□□ -0.6
CASC3-206ENST00000579238 UBN2Q6ZU65 1347 aa11.33□□□□□ -0.6
CASC3-206ENST00000579238 GPTP24298 496 aa11.32□□□□□ -0.6
CASC3-206ENST00000579238 LMOD1P29536 600 aaPredicted RBP11.32□□□□□ -0.6
CASC3-206ENST00000579238 SUSD4Q5VX71 490 aa11.32□□□□□ -0.6
CASC3-206ENST00000579238 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
CASC3-206ENST00000579238 CRAMP1Q96RY5 1269 aa11.32□□□□□ -0.6
CASC3-206ENST00000579238 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
CASC3-206ENST00000579238 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
CASC3-206ENST00000579238 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
CASC3-206ENST00000579238 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
CASC3-206ENST00000579238 MYL6BP14649 208 aa11.31□□□□□ -0.6
CASC3-206ENST00000579238 NFE2L2Q16236 605 aa11.31□□□□□ -0.6
CASC3-206ENST00000579238 GIGYF2Q6Y7W6 1299 aaKnown RBP11.31□□□□□ -0.6
CASC3-206ENST00000579238 ZNF34Q8IZ26 560 aa11.31□□□□□ -0.6
CASC3-206ENST00000579238 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
CASC3-206ENST00000579238 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
CASC3-206ENST00000579238 DDX21Q9NR30 783 aaKnown RBP eCLIP11.31□□□□□ -0.6
CASC3-206ENST00000579238 NUP98P52948 1817 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 COL4A5P29400 1685 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
CASC3-206ENST00000579238 NTSR2O95665 410 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 SCNN1DP51172 638 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 LBX1P52954 281 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
CASC3-206ENST00000579238 PARP10Q53GL7 1025 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 PPP1R42Q7Z4L9 355 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
CASC3-206ENST00000579238 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
CASC3-206ENST00000579238 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
CASC3-206ENST00000579238 ABT1Q9ULW3 272 aaKnown RBP11.3□□□□□ -0.6
CASC3-206ENST00000579238 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
CASC3-206ENST00000579238 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
CASC3-206ENST00000579238 EPS15P42566 896 aa11.29□□□□□ -0.6
CASC3-206ENST00000579238 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
CASC3-206ENST00000579238 NLRP3Q96P20 1036 aa11.29□□□□□ -0.6
CASC3-206ENST00000579238 TMX4Q9H1E5 349 aaPredicted RBP11.29□□□□□ -0.6
CASC3-206ENST00000579238 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
CASC3-206ENST00000579238 LTBP1Q14766 1721 aa11.29□□□□□ -0.6
CASC3-206ENST00000579238 DLG5Q8TDM6 1919 aa11.29□□□□□ -0.6
CASC3-206ENST00000579238 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
CASC3-206ENST00000579238 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
CASC3-206ENST00000579238 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
CASC3-206ENST00000579238 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
CASC3-206ENST00000579238 LRP10Q7Z4F1 713 aa11.28□□□□□ -0.6
CASC3-206ENST00000579238 ATP6V0A2Q9Y487 856 aa11.28□□□□□ -0.6
CASC3-206ENST00000579238 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
CASC3-206ENST00000579238 ECE1P42892 770 aa11.27□□□□□ -0.61
CASC3-206ENST00000579238 AOC3Q16853 763 aa11.27□□□□□ -0.61
CASC3-206ENST00000579238 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
CASC3-206ENST00000579238 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
CASC3-206ENST00000579238 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
CASC3-206ENST00000579238 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
CASC3-206ENST00000579238 TSPYL4Q9UJ04 414 aa11.27□□□□□ -0.61
CASC3-206ENST00000579238 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
CASC3-206ENST00000579238 PDIA6Q15084 440 aa11.26□□□□□ -0.61
CASC3-206ENST00000579238 CST9Q5W186 159 aa11.26□□□□□ -0.61
CASC3-206ENST00000579238 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
CASC3-206ENST00000579238 ADARB2Q9NS39 739 aaKnown RBP11.26□□□□□ -0.61
CASC3-206ENST00000579238 BABAM1Q9NWV8 329 aa11.26□□□□□ -0.61
CASC3-206ENST00000579238 GPRC5DQ9NZD1 345 aa11.26□□□□□ -0.61
CASC3-206ENST00000579238 TRAF5O00463 557 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 BBOX1O75936 387 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 EIF2S2P20042 333 aaKnown RBP11.25□□□□□ -0.61
CASC3-206ENST00000579238 CXCL9Q07325 125 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 HSP90AB3PQ58FF7 597 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
CASC3-206ENST00000579238 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
CASC3-206ENST00000579238 BEGAINQ9BUH8 593 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 ABCC4O15439 1325 aa11.25□□□□□ -0.61
CASC3-206ENST00000579238 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
CASC3-206ENST00000579238 PROSER3Q2NL68 480 aa11.24□□□□□ -0.61
CASC3-206ENST00000579238 CYP4F22Q6NT55 531 aa11.24□□□□□ -0.61
CASC3-206ENST00000579238 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
CASC3-206ENST00000579238 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
CASC3-206ENST00000579238 ABHD8Q96I13 439 aa11.24□□□□□ -0.61
CASC3-206ENST00000579238 TRPM7Q96QT4 1865 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 ANXA1P04083 346 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 MAP2K2P36507 400 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 GMPSP49915 693 aaPredicted RBP11.23□□□□□ -0.61
CASC3-206ENST00000579238 RIPK4P57078 832 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 CIAPIN1Q6FI81 312 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 MPNDQ8N594 471 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 PGAP2Q9UHJ9 254 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 CDHR2Q9BYE9 1310 aa11.23□□□□□ -0.61
CASC3-206ENST00000579238 CELF2O95319 508 aaKnown RBP11.22□□□□□ -0.61
CASC3-206ENST00000579238 HCLS1P14317 486 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 679.3 ms