RNA–Protein interactions for RNA: ENST00000579225.2

SRGAP2-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 1,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-204ENST00000579225 MAP3K15Q6ZN16 1313 aa22.26■■□□□ 1.15
SRGAP2-204ENST00000579225 ABCC12Q96J65 1359 aa22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 VEGFBP49765 207 aa22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 CC2D2BQ6DHV5 1058 aa22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 TTLL7Q6ZT98 887 aa22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 JDP2Q8WYK2 163 aa22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 LAMB4A4D0S4 1761 aa22.25■■□□□ 1.15
SRGAP2-204ENST00000579225 HOXA10P31260 410 aaPredicted RBP22.24■■□□□ 1.15
SRGAP2-204ENST00000579225 CNTROBQ8N137 903 aa22.24■■□□□ 1.15
SRGAP2-204ENST00000579225 ADAMTS8Q9UP79 889 aa22.24■■□□□ 1.15
SRGAP2-204ENST00000579225 ADAMTSL1Q8N6G6 1762 aa22.24■■□□□ 1.15
SRGAP2-204ENST00000579225 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
SRGAP2-204ENST00000579225 NUP98P52948 1817 aa22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 MYL6BP14649 208 aa22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 GPTP24298 496 aa22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 SUSD4Q5VX71 490 aa22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 MAP1SQ66K74 1059 aaPredicted RBP22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 RPGRQ92834 1020 aaKnown RBP22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 MRS2Q9HD23 443 aa22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 UBN2Q6ZU65 1347 aa22.22■■□□□ 1.15
SRGAP2-204ENST00000579225 KDM3BQ7LBC6 1761 aa22.21■■□□□ 1.15
SRGAP2-204ENST00000579225 THUMPD2Q9BTF0 503 aaKnown RBP22.21■■□□□ 1.15
SRGAP2-204ENST00000579225 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
SRGAP2-204ENST00000579225 PRDM10Q9NQV6 1147 aa22.21■■□□□ 1.15
SRGAP2-204ENST00000579225 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
SRGAP2-204ENST00000579225 EIF6P56537 245 aaKnown RBP22.2■■□□□ 1.14
SRGAP2-204ENST00000579225 GRIPAP1Q4V328 841 aa22.2■■□□□ 1.14
SRGAP2-204ENST00000579225 ZNF34Q8IZ26 560 aa22.2■■□□□ 1.14
SRGAP2-204ENST00000579225 IBTKQ9P2D0 1353 aaPredicted RBP22.2■■□□□ 1.14
SRGAP2-204ENST00000579225 RIC1Q4ADV7 1423 aa22.2■■□□□ 1.14
SRGAP2-204ENST00000579225 RASSF10A6NK89 507 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 TMPOP42166 694 aaKnown RBP22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 CTCFP49711 727 aaPredicted RBP22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 RIPK4P57078 832 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 DEFB115Q30KQ5 88 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 AIDAQ96BJ3 306 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 CRAMP1Q96RY5 1269 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 WBP1LQ9NX94 342 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 GJA3Q9Y6H8 435 aa22.19■■□□□ 1.14
SRGAP2-204ENST00000579225 COL4A5P29400 1685 aa22.18■■□□□ 1.14
SRGAP2-204ENST00000579225 GIGYF2Q6Y7W6 1299 aaKnown RBP22.18■■□□□ 1.14
SRGAP2-204ENST00000579225 RBM17Q96I25 401 aaKnown RBP22.18■■□□□ 1.14
SRGAP2-204ENST00000579225 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
SRGAP2-204ENST00000579225 NTSR2O95665 410 aa22.17■■□□□ 1.14
SRGAP2-204ENST00000579225 LARGE2Q8N3Y3 721 aa22.17■■□□□ 1.14
SRGAP2-204ENST00000579225 ERBB4Q15303 1308 aa22.16■■□□□ 1.14
SRGAP2-204ENST00000579225 PPEF1O14829 653 aaPredicted RBP22.16■■□□□ 1.14
SRGAP2-204ENST00000579225 LMOD1P29536 600 aaPredicted RBP22.16■■□□□ 1.14
SRGAP2-204ENST00000579225 NCBP3Q53F19 620 aaKnown RBP22.16■■□□□ 1.14
SRGAP2-204ENST00000579225 SLC51AQ86UW1 340 aa22.16■■□□□ 1.14
SRGAP2-204ENST00000579225 TCERG1O14776 1098 aaKnown RBP22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 EPS15P42566 896 aa22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 SCNN1DP51172 638 aa22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 CALD1Q05682 793 aaKnown RBP22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 C3orf67Q6ZVT6 689 aa22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 PPP1R42Q7Z4L9 355 aa22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 DDX21Q9NR30 783 aaKnown RBP eCLIP22.15■■□□□ 1.14
SRGAP2-204ENST00000579225 PARP10Q53GL7 1025 aa22.14■■□□□ 1.13
SRGAP2-204ENST00000579225 LRP10Q7Z4F1 713 aa22.14■■□□□ 1.13
SRGAP2-204ENST00000579225 NLRP3Q96P20 1036 aa22.14■■□□□ 1.13
SRGAP2-204ENST00000579225 WDR33Q9C0J8 1336 aaKnown RBP22.13■■□□□ 1.13
SRGAP2-204ENST00000579225 LBX1P52954 281 aa22.13■■□□□ 1.13
SRGAP2-204ENST00000579225 PDIA6Q15084 440 aa22.13■■□□□ 1.13
SRGAP2-204ENST00000579225 CCDC146Q8IYE0 955 aa22.13■■□□□ 1.13
SRGAP2-204ENST00000579225 ABT1Q9ULW3 272 aaKnown RBP22.13■■□□□ 1.13
SRGAP2-204ENST00000579225 LTBP1Q14766 1721 aa22.13■■□□□ 1.13
SRGAP2-204ENST00000579225 SLC10A5Q5PT55 438 aa22.12■■□□□ 1.13
SRGAP2-204ENST00000579225 NIM1KQ8IY84 436 aa22.12■■□□□ 1.13
SRGAP2-204ENST00000579225 TSPYL4Q9UJ04 414 aa22.12■■□□□ 1.13
SRGAP2-204ENST00000579225 MAP2K1Q02750 393 aaPredicted RBP22.11■■□□□ 1.13
SRGAP2-204ENST00000579225 FMR1Q06787 632 aaKnown RBP eCLIP22.11■■□□□ 1.13
SRGAP2-204ENST00000579225 USP50Q70EL3 339 aaPredicted RBP22.11■■□□□ 1.13
SRGAP2-204ENST00000579225 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
SRGAP2-204ENST00000579225 ATP6V0A2Q9Y487 856 aa22.11■■□□□ 1.13
SRGAP2-204ENST00000579225 CCER2I3L3R5 266 aa22.1■■□□□ 1.13
SRGAP2-204ENST00000579225 PPIP5K2O43314 1243 aa22.1■■□□□ 1.13
SRGAP2-204ENST00000579225 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
SRGAP2-204ENST00000579225 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
SRGAP2-204ENST00000579225 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
SRGAP2-204ENST00000579225 AOC3Q16853 763 aa22.09■■□□□ 1.13
SRGAP2-204ENST00000579225 HSPA8P11142 646 aaKnown RBP22.08■■□□□ 1.13
SRGAP2-204ENST00000579225 PROSER3Q2NL68 480 aa22.08■■□□□ 1.13
SRGAP2-204ENST00000579225 CCDC184Q52MB2 194 aa22.08■■□□□ 1.13
SRGAP2-204ENST00000579225 APAF1O14727 1248 aa22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 ANXA1P04083 346 aa22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 NEUROD2Q15784 382 aa22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 CST9Q5W186 159 aa22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 RTFDC1Q9BY42 306 aaPredicted RBP22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 GPRC5DQ9NZD1 345 aa22.07■■□□□ 1.12
SRGAP2-204ENST00000579225 ABCC4O15439 1325 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 TRAF5O00463 557 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 BBOX1O75936 387 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 CXCL9Q07325 125 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 SUPT20HQ8NEM7 779 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 ADARB2Q9NS39 739 aaKnown RBP22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 ZNRF3Q9ULT6 936 aa22.06■■□□□ 1.12
SRGAP2-204ENST00000579225 SP8Q8IXZ3 490 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms