RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 GPC2Q8N158 579 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 ZBTB3Q9H5J0 574 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 CLEC11AQ9Y240 323 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 FOXN1O15353 648 aa27.78■■■□□ 2.04
TSEN54-205ENST00000578415 SUSD4Q5VX71 490 aa27.78■■■□□ 2.04
TSEN54-205ENST00000578415 SLC51AQ86UW1 340 aa27.78■■■□□ 2.04
TSEN54-205ENST00000578415 DLG5Q8TDM6 1919 aa27.78■■■□□ 2.04
TSEN54-205ENST00000578415 VEGFBP49765 207 aa27.77■■■□□ 2.04
TSEN54-205ENST00000578415 CC2D2BQ6DHV5 1058 aa27.77■■■□□ 2.04
TSEN54-205ENST00000578415 PNMA8AQ86V59 439 aaPredicted RBP27.77■■■□□ 2.04
TSEN54-205ENST00000578415 JDP2Q8WYK2 163 aa27.77■■■□□ 2.04
TSEN54-205ENST00000578415 MAP1SQ66K74 1059 aaPredicted RBP27.76■■■□□ 2.03
TSEN54-205ENST00000578415 ZNF34Q8IZ26 560 aa27.76■■■□□ 2.03
TSEN54-205ENST00000578415 RPGRQ92834 1020 aaKnown RBP27.76■■■□□ 2.03
TSEN54-205ENST00000578415 NUP98P52948 1817 aa27.76■■■□□ 2.03
TSEN54-205ENST00000578415 CNTROBQ8N137 903 aa27.75■■■□□ 2.03
TSEN54-205ENST00000578415 NTSR2O95665 410 aa27.74■■■□□ 2.03
TSEN54-205ENST00000578415 C3orf67Q6ZVT6 689 aa27.74■■■□□ 2.03
TSEN54-205ENST00000578415 GIGYF2Q6Y7W6 1299 aaKnown RBP27.73■■■□□ 2.03
TSEN54-205ENST00000578415 CRAMP1Q96RY5 1269 aa27.73■■■□□ 2.03
TSEN54-205ENST00000578415 ERBB4Q15303 1308 aa27.72■■■□□ 2.03
TSEN54-205ENST00000578415 EIF6P56537 245 aaKnown RBP27.72■■■□□ 2.03
TSEN54-205ENST00000578415 LRP10Q7Z4F1 713 aa27.72■■■□□ 2.03
TSEN54-205ENST00000578415 RBM17Q96I25 401 aaKnown RBP27.71■■■□□ 2.03
TSEN54-205ENST00000578415 GJA3Q9Y6H8 435 aa27.71■■■□□ 2.03
TSEN54-205ENST00000578415 LTBP1Q14766 1721 aa27.7■■■□□ 2.03
TSEN54-205ENST00000578415 RASSF10A6NK89 507 aa27.7■■■□□ 2.02
TSEN54-205ENST00000578415 PPEF1O14829 653 aaPredicted RBP27.7■■■□□ 2.02
TSEN54-205ENST00000578415 GRIPAP1Q4V328 841 aa27.7■■■□□ 2.02
TSEN54-205ENST00000578415 LARGE2Q8N3Y3 721 aa27.7■■■□□ 2.02
TSEN54-205ENST00000578415 PRDM10Q9NQV6 1147 aa27.7■■■□□ 2.02
TSEN54-205ENST00000578415 MAPK8IP3Q9UPT6 1336 aa27.69■■■□□ 2.02
TSEN54-205ENST00000578415 TCERG1O14776 1098 aaKnown RBP27.69■■■□□ 2.02
TSEN54-205ENST00000578415 SCNN1DP51172 638 aa27.69■■■□□ 2.02
TSEN54-205ENST00000578415 PDIA6Q15084 440 aa27.69■■■□□ 2.02
TSEN54-205ENST00000578415 WBP1LQ9NX94 342 aa27.69■■■□□ 2.02
TSEN54-205ENST00000578415 AIDAQ96BJ3 306 aa27.68■■■□□ 2.02
TSEN54-205ENST00000578415 TSPYL4Q9UJ04 414 aa27.68■■■□□ 2.02
TSEN54-205ENST00000578415 EPS15P42566 896 aa27.67■■■□□ 2.02
TSEN54-205ENST00000578415 CTCFP49711 727 aaPredicted RBP27.67■■■□□ 2.02
TSEN54-205ENST00000578415 PARP10Q53GL7 1025 aa27.67■■■□□ 2.02
TSEN54-205ENST00000578415 PPP1R42Q7Z4L9 355 aa27.67■■■□□ 2.02
TSEN54-205ENST00000578415 PNNQ9H307 717 aaKnown RBP27.67■■■□□ 2.02
TSEN54-205ENST00000578415 LMOD1P29536 600 aaPredicted RBP27.66■■■□□ 2.02
TSEN54-205ENST00000578415 DEFB115Q30KQ5 88 aa27.66■■■□□ 2.02
TSEN54-205ENST00000578415 DDX21Q9NR30 783 aaKnown RBP eCLIP27.66■■■□□ 2.02
TSEN54-205ENST00000578415 PROSER3Q2NL68 480 aa27.65■■■□□ 2.02
TSEN54-205ENST00000578415 EIF2S2P20042 333 aaKnown RBP27.64■■■□□ 2.02
TSEN54-205ENST00000578415 SLC10A5Q5PT55 438 aa27.64■■■□□ 2.02
TSEN54-205ENST00000578415 NIM1KQ8IY84 436 aa27.64■■■□□ 2.02
TSEN54-205ENST00000578415 NLRP3Q96P20 1036 aa27.64■■■□□ 2.02
TSEN54-205ENST00000578415 ANXA1P04083 346 aa27.63■■■□□ 2.01
TSEN54-205ENST00000578415 FMR1Q06787 632 aaKnown RBP eCLIP27.63■■■□□ 2.01
TSEN54-205ENST00000578415 UTP14AQ9BVJ6 771 aaKnown RBP27.63■■■□□ 2.01
TSEN54-205ENST00000578415 ABT1Q9ULW3 272 aaKnown RBP27.63■■■□□ 2.01
TSEN54-205ENST00000578415 ATP6V0A2Q9Y487 856 aa27.63■■■□□ 2.01
TSEN54-205ENST00000578415 PPIP5K2O43314 1243 aa27.62■■■□□ 2.01
TSEN54-205ENST00000578415 AOC3Q16853 763 aa27.62■■■□□ 2.01
TSEN54-205ENST00000578415 WDR33Q9C0J8 1336 aaKnown RBP27.62■■■□□ 2.01
TSEN54-205ENST00000578415 LBX1P52954 281 aa27.61■■■□□ 2.01
TSEN54-205ENST00000578415 RIPK4P57078 832 aa27.61■■■□□ 2.01
TSEN54-205ENST00000578415 ABCC4O15439 1325 aa27.61■■■□□ 2.01
TSEN54-205ENST00000578415 USP50Q70EL3 339 aaPredicted RBP27.6■■■□□ 2.01
TSEN54-205ENST00000578415 BABAM1Q9NWV8 329 aa27.59■■■□□ 2.01
TSEN54-205ENST00000578415 RTFDC1Q9BY42 306 aaPredicted RBP27.58■■■□□ 2.01
TSEN54-205ENST00000578415 VPS33BQ9H267 617 aa27.58■■■□□ 2.01
TSEN54-205ENST00000578415 TRAF5O00463 557 aa27.57■■■□□ 2
TSEN54-205ENST00000578415 HSPA8P11142 646 aaKnown RBP27.57■■■□□ 2
TSEN54-205ENST00000578415 NLRP10Q86W26 655 aa27.57■■■□□ 2
TSEN54-205ENST00000578415 TMX4Q9H1E5 349 aaPredicted RBP27.57■■■□□ 2
TSEN54-205ENST00000578415 GPRC5DQ9NZD1 345 aa27.57■■■□□ 2
TSEN54-205ENST00000578415 TMPOP42166 694 aaKnown RBP27.56■■■□□ 2
TSEN54-205ENST00000578415 MAP2K1Q02750 393 aaPredicted RBP27.56■■■□□ 2
TSEN54-205ENST00000578415 CXCL9Q07325 125 aa27.56■■■□□ 2
TSEN54-205ENST00000578415 CST9Q5W186 159 aa27.56■■■□□ 2
TSEN54-205ENST00000578415 COPS6Q7L5N1 327 aa27.56■■■□□ 2
TSEN54-205ENST00000578415 NECTIN2Q92692 538 aa27.56■■■□□ 2
TSEN54-205ENST00000578415 ZNRF3Q9ULT6 936 aa27.56■■■□□ 2
TSEN54-205ENST00000578415 HCLS1P14317 486 aaPredicted RBP27.55■■■□□ 2
TSEN54-205ENST00000578415 XAGE3Q8WTP9 111 aa27.55■■■□□ 2
TSEN54-205ENST00000578415 ADARB2Q9NS39 739 aaKnown RBP27.55■■■□□ 2
TSEN54-205ENST00000578415 BBOX1O75936 387 aa27.54■■■□□ 2
TSEN54-205ENST00000578415 AIMP1Q12904 312 aaKnown RBP27.54■■■□□ 2
TSEN54-205ENST00000578415 HSP90AB3PQ58FF7 597 aa27.54■■■□□ 2
TSEN54-205ENST00000578415 SP8Q8IXZ3 490 aa27.54■■■□□ 2
TSEN54-205ENST00000578415 SUPT20HQ8NEM7 779 aa27.54■■■□□ 2
TSEN54-205ENST00000578415 CAPNS2Q96L46 248 aa27.54■■■□□ 2
TSEN54-205ENST00000578415 THSD7BQ9C0I4 1608 aa27.53■■■□□ 2
TSEN54-205ENST00000578415 DPP8Q6V1X1 898 aaPredicted RBP27.53■■■□□ 2
TSEN54-205ENST00000578415 LMOD3Q0VAK6 560 aa27.52■■■□□ 2
TSEN54-205ENST00000578415 KRT24Q2M2I5 525 aa27.52■■■□□ 2
TSEN54-205ENST00000578415 GMPSP49915 693 aaPredicted RBP27.51■■□□□ 1.99
TSEN54-205ENST00000578415 KIAA2012Q0VF49 1180 aa27.51■■□□□ 1.99
TSEN54-205ENST00000578415 TCIRG1Q13488 830 aa27.51■■□□□ 1.99
TSEN54-205ENST00000578415 CYP4F22Q6NT55 531 aa27.51■■□□□ 1.99
TSEN54-205ENST00000578415 MPNDQ8N594 471 aa27.51■■□□□ 1.99
TSEN54-205ENST00000578415 TLL2Q9Y6L7 1015 aa27.51■■□□□ 1.99
TSEN54-205ENST00000578415 RALBP1Q15311 655 aa27.5■■□□□ 1.99
TSEN54-205ENST00000578415 PAXIP1Q6ZW49 1069 aaPredicted RBP27.5■■□□□ 1.99
TSEN54-205ENST00000578415 TRMT112Q9UI30 125 aaKnown RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms