RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 MKL2Q9ULH7 1088 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 TLDC2A0PJX2 215 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 GGT6Q6P531 493 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 RUNDC1Q96C34 613 aa12.03□□□□□ -0.48
USP6-206ENST00000575709 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
USP6-206ENST00000575709 SYF2O95926 243 aaKnown RBP12.02□□□□□ -0.48
USP6-206ENST00000575709 STK38LQ9Y2H1 464 aa12.02□□□□□ -0.48
USP6-206ENST00000575709 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.48
USP6-206ENST00000575709 USP6NLQ92738 828 aa12.02□□□□□ -0.48
USP6-206ENST00000575709 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.48
USP6-206ENST00000575709 NDUFAB1O14561 156 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 FCHSD2O94868 740 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 ERCC6LQ2NKX8 1250 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 GEN1Q17RS7 908 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 ZNF354CQ86Y25 554 aa12.02□□□□□ -0.49
USP6-206ENST00000575709 SPATS2Q86XZ4 545 aaKnown RBP12.01□□□□□ -0.49
USP6-206ENST00000575709 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 ANLNQ9NQW6 1124 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 TMEM110-MUSTN1A8MSY1 372 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 TCERG1LQ5VWI1 586 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 SKOR1P84550 965 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 PPARDQ03181 441 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 FYB2Q5VWT5 728 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 PLVAPQ9BX97 442 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 PALMDQ9NP74 551 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 SLMAPQ14BN4 828 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 ATP2A3Q93084 1043 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 MMRN2Q9H8L6 949 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.01□□□□□ -0.49
USP6-206ENST00000575709 GUCY1B3Q02153 619 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 CALCOCO2Q13137 446 aa12.01□□□□□ -0.49
USP6-206ENST00000575709 ZBTB41Q5SVQ8 909 aa12□□□□□ -0.49
USP6-206ENST00000575709 TXNDC16Q9P2K2 825 aa12□□□□□ -0.49
USP6-206ENST00000575709 ATP2A1O14983 1001 aa12□□□□□ -0.49
USP6-206ENST00000575709 CRCPO75575 148 aa12□□□□□ -0.49
USP6-206ENST00000575709 PTGS1P23219 599 aa12□□□□□ -0.49
USP6-206ENST00000575709 SNX16P57768 344 aa12□□□□□ -0.49
USP6-206ENST00000575709 SPAG5Q96R06 1193 aa12□□□□□ -0.49
USP6-206ENST00000575709 BAIAP2L1Q9UHR4 511 aa12□□□□□ -0.49
USP6-206ENST00000575709 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
USP6-206ENST00000575709 SKILP12757 684 aa12□□□□□ -0.49
USP6-206ENST00000575709 ZSCAN23Q3MJ62 389 aa12□□□□□ -0.49
USP6-206ENST00000575709 PPP4R3AQ6IN85 833 aa12□□□□□ -0.49
USP6-206ENST00000575709 CCDC65Q8IXS2 484 aa12□□□□□ -0.49
USP6-206ENST00000575709 ZNF428Q96B54 188 aa12□□□□□ -0.49
USP6-206ENST00000575709 GNAI1P63096 354 aa12□□□□□ -0.49
USP6-206ENST00000575709 SF3A3Q12874 501 aaKnown RBP eCLIP12□□□□□ -0.49
USP6-206ENST00000575709 UBASH3AP57075 661 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 CETN1Q12798 172 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 HMOX1P09601 288 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 CHMP4BP1P59074 171 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 UAP1Q16222 522 aaPredicted RBP11.99□□□□□ -0.49
USP6-206ENST00000575709 CCDC122Q5T0U0 273 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 HVCN1Q96D96 273 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 SCAND2PQ9GZW5 306 aaPredicted RBP11.99□□□□□ -0.49
USP6-206ENST00000575709 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 WDR78Q5VTH9 848 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 CTCFLQ8NI51 663 aaPredicted RBP11.99□□□□□ -0.49
USP6-206ENST00000575709 ZNF622Q969S3 477 aaKnown RBP eCLIP11.99□□□□□ -0.49
USP6-206ENST00000575709 VCX3AQ9NNX9 186 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 GNAI2P04899 355 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 ARHGAP25P42331 645 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 NUDCD3Q8IVD9 361 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 CCT6BQ92526 530 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 TNPO1Q92973 898 aaKnown RBP11.99□□□□□ -0.49
USP6-206ENST00000575709 CNNM1Q9NRU3 951 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
USP6-206ENST00000575709 RAB11FIP4Q86YS3 637 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 RIPOR2Q9Y4F9 1068 aa11.99□□□□□ -0.49
USP6-206ENST00000575709 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 SSFA2P28290 1259 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 BICD1Q96G01 975 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 NUB1Q9Y5A7 615 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 TBC1D5Q92609 795 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 SYNCQ9H7C4 482 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 GDPD2Q9HCC8 539 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 NKIRAS1Q9NYS0 192 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 RASIP1Q5U651 963 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 TRPC3Q13507 836 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 ARFGAP2Q8N6H7 521 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 U2AF2P26368 475 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP6-206ENST00000575709 NUP155O75694 1391 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 ZNF165P49910 485 aa11.98□□□□□ -0.49
USP6-206ENST00000575709 TTC12Q9H892 705 aaPredicted RBP11.98□□□□□ -0.49
USP6-206ENST00000575709 C11orf95C9JLR9 678 aaPredicted RBP11.97□□□□□ -0.49
USP6-206ENST00000575709 CCDC172P0C7W6 258 aa11.97□□□□□ -0.49
USP6-206ENST00000575709 TMEM57Q8N5G2 664 aa11.97□□□□□ -0.49
USP6-206ENST00000575709 SEC63Q9UGP8 760 aaKnown RBP11.97□□□□□ -0.49
USP6-206ENST00000575709 AKNAQ7Z591 1439 aa11.97□□□□□ -0.49
USP6-206ENST00000575709 NOB1Q9ULX3 412 aaKnown RBP11.97□□□□□ -0.49
USP6-206ENST00000575709 GJC1P36383 396 aa11.97□□□□□ -0.49
USP6-206ENST00000575709 SESN3P58005 492 aa11.97□□□□□ -0.49
USP6-206ENST00000575709 RPSAP08865 295 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms