RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 EPHX2P34913 555 aa22.07■■□□□ 1.12
TVP23A-209ENST00000575135 CC2D2BQ6DHV5 1058 aa22.07■■□□□ 1.12
TVP23A-209ENST00000575135 CLEC11AQ9Y240 323 aa22.07■■□□□ 1.12
TVP23A-209ENST00000575135 RNF123Q5XPI4 1314 aa22.06■■□□□ 1.12
TVP23A-209ENST00000575135 JDP2Q8WYK2 163 aa22.06■■□□□ 1.12
TVP23A-209ENST00000575135 TSPYL4Q9UJ04 414 aa22.06■■□□□ 1.12
TVP23A-209ENST00000575135 IBTKQ9P2D0 1353 aaPredicted RBP22.06■■□□□ 1.12
TVP23A-209ENST00000575135 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
TVP23A-209ENST00000575135 GIGYF2Q6Y7W6 1299 aaKnown RBP22.05■■□□□ 1.12
TVP23A-209ENST00000575135 GPC2Q8N158 579 aa22.05■■□□□ 1.12
TVP23A-209ENST00000575135 ERBB4Q15303 1308 aa22.05■■□□□ 1.12
TVP23A-209ENST00000575135 CNTNAP1P78357 1384 aa22.04■■□□□ 1.12
TVP23A-209ENST00000575135 NTSR2O95665 410 aa22.04■■□□□ 1.12
TVP23A-209ENST00000575135 RIPK4P57078 832 aa22.04■■□□□ 1.12
TVP23A-209ENST00000575135 C3orf67Q6ZVT6 689 aa22.04■■□□□ 1.12
TVP23A-209ENST00000575135 SLC51AQ86UW1 340 aa22.04■■□□□ 1.12
TVP23A-209ENST00000575135 PNMA8AQ86V59 439 aaPredicted RBP22.04■■□□□ 1.12
TVP23A-209ENST00000575135 ADAMTSL1Q8N6G6 1762 aa22.03■■□□□ 1.12
TVP23A-209ENST00000575135 TMEM88BA6NKF7 163 aa22.03■■□□□ 1.12
TVP23A-209ENST00000575135 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
TVP23A-209ENST00000575135 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
TVP23A-209ENST00000575135 PDIA6Q15084 440 aa22.03■■□□□ 1.12
TVP23A-209ENST00000575135 LRP10Q7Z4F1 713 aa22.03■■□□□ 1.12
TVP23A-209ENST00000575135 RBM17Q96I25 401 aaKnown RBP22.03■■□□□ 1.12
TVP23A-209ENST00000575135 CRAMP1Q96RY5 1269 aa22.03■■□□□ 1.12
TVP23A-209ENST00000575135 COL4A5P29400 1685 aa22.03■■□□□ 1.12
TVP23A-209ENST00000575135 PPP1R42Q7Z4L9 355 aa22.02■■□□□ 1.12
TVP23A-209ENST00000575135 GJA3Q9Y6H8 435 aa22.02■■□□□ 1.12
TVP23A-209ENST00000575135 PPEF1O14829 653 aaPredicted RBP22.01■■□□□ 1.11
TVP23A-209ENST00000575135 ANXA1P04083 346 aa22.01■■□□□ 1.11
TVP23A-209ENST00000575135 EIF6P56537 245 aaKnown RBP22.01■■□□□ 1.11
TVP23A-209ENST00000575135 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
TVP23A-209ENST00000575135 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
TVP23A-209ENST00000575135 PARP10Q53GL7 1025 aa22.01■■□□□ 1.11
TVP23A-209ENST00000575135 MAP1SQ66K74 1059 aaPredicted RBP22.01■■□□□ 1.11
TVP23A-209ENST00000575135 CNTROBQ8N137 903 aa22.01■■□□□ 1.11
TVP23A-209ENST00000575135 LARGE2Q8N3Y3 721 aa22■■□□□ 1.11
TVP23A-209ENST00000575135 NLRP3Q96P20 1036 aa22■■□□□ 1.11
TVP23A-209ENST00000575135 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
TVP23A-209ENST00000575135 VEGFBP49765 207 aa21.99■■□□□ 1.11
TVP23A-209ENST00000575135 UTP14AQ9BVJ6 771 aaKnown RBP21.99■■□□□ 1.11
TVP23A-209ENST00000575135 BABAM1Q9NWV8 329 aa21.99■■□□□ 1.11
TVP23A-209ENST00000575135 RALBP1Q15311 655 aa21.98■■□□□ 1.11
TVP23A-209ENST00000575135 SLC10A5Q5PT55 438 aa21.98■■□□□ 1.11
TVP23A-209ENST00000575135 FOXN1O15353 648 aa21.97■■□□□ 1.11
TVP23A-209ENST00000575135 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
TVP23A-209ENST00000575135 LMOD1P29536 600 aaPredicted RBP21.96■■□□□ 1.11
TVP23A-209ENST00000575135 SCNN1DP51172 638 aa21.96■■□□□ 1.11
TVP23A-209ENST00000575135 COPS6Q7L5N1 327 aa21.96■■□□□ 1.11
TVP23A-209ENST00000575135 ATP6V0A2Q9Y487 856 aa21.96■■□□□ 1.11
TVP23A-209ENST00000575135 LTBP1Q14766 1721 aa21.96■■□□□ 1.11
TVP23A-209ENST00000575135 EPS15P42566 896 aa21.95■■□□□ 1.1
TVP23A-209ENST00000575135 LMOD3Q0VAK6 560 aa21.95■■□□□ 1.1
TVP23A-209ENST00000575135 AIMP1Q12904 312 aaKnown RBP21.95■■□□□ 1.1
TVP23A-209ENST00000575135 NIM1KQ8IY84 436 aa21.95■■□□□ 1.1
TVP23A-209ENST00000575135 TMX4Q9H1E5 349 aaPredicted RBP21.95■■□□□ 1.1
TVP23A-209ENST00000575135 PPIP5K2O43314 1243 aa21.94■■□□□ 1.1
TVP23A-209ENST00000575135 XAGE3Q8WTP9 111 aa21.94■■□□□ 1.1
TVP23A-209ENST00000575135 ABCC4O15439 1325 aa21.94■■□□□ 1.1
TVP23A-209ENST00000575135 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
TVP23A-209ENST00000575135 HCLS1P14317 486 aaPredicted RBP21.93■■□□□ 1.1
TVP23A-209ENST00000575135 NEUROD2Q15784 382 aa21.93■■□□□ 1.1
TVP23A-209ENST00000575135 AOC3Q16853 763 aa21.93■■□□□ 1.1
TVP23A-209ENST00000575135 DEFB115Q30KQ5 88 aa21.93■■□□□ 1.1
TVP23A-209ENST00000575135 NLRP10Q86W26 655 aa21.93■■□□□ 1.1
TVP23A-209ENST00000575135 CCDC146Q8IYE0 955 aa21.93■■□□□ 1.1
TVP23A-209ENST00000575135 ANKRD36CQ5JPF3 1778 aa21.92■■□□□ 1.1
TVP23A-209ENST00000575135 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
TVP23A-209ENST00000575135 HSP90AB3PQ58FF7 597 aa21.92■■□□□ 1.1
TVP23A-209ENST00000575135 DDX21Q9NR30 783 aaKnown RBP eCLIP21.92■■□□□ 1.1
TVP23A-209ENST00000575135 BBOX1O75936 387 aa21.91■■□□□ 1.1
TVP23A-209ENST00000575135 FMR1Q06787 632 aaKnown RBP eCLIP21.91■■□□□ 1.1
TVP23A-209ENST00000575135 TCIRG1Q13488 830 aa21.91■■□□□ 1.1
TVP23A-209ENST00000575135 AIDAQ96BJ3 306 aa21.91■■□□□ 1.1
TVP23A-209ENST00000575135 VPS33BQ9H267 617 aa21.91■■□□□ 1.1
TVP23A-209ENST00000575135 ABT1Q9ULW3 272 aaKnown RBP21.91■■□□□ 1.1
TVP23A-209ENST00000575135 LAMB2P55268 1798 aa21.91■■□□□ 1.1
TVP23A-209ENST00000575135 CHL1O00533 1208 aa21.9■■□□□ 1.1
TVP23A-209ENST00000575135 CTCFP49711 727 aaPredicted RBP21.9■■□□□ 1.1
TVP23A-209ENST00000575135 USP50Q70EL3 339 aaPredicted RBP21.9■■□□□ 1.1
TVP23A-209ENST00000575135 SP8Q8IXZ3 490 aa21.9■■□□□ 1.1
TVP23A-209ENST00000575135 RTFDC1Q9BY42 306 aaPredicted RBP21.9■■□□□ 1.1
TVP23A-209ENST00000575135 PRDM10Q9NQV6 1147 aa21.9■■□□□ 1.1
TVP23A-209ENST00000575135 WBP1LQ9NX94 342 aa21.9■■□□□ 1.1
TVP23A-209ENST00000575135 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
TVP23A-209ENST00000575135 CXCL9Q07325 125 aa21.89■■□□□ 1.09
TVP23A-209ENST00000575135 DPP8Q6V1X1 898 aaPredicted RBP21.89■■□□□ 1.09
TVP23A-209ENST00000575135 SUPT20HQ8NEM7 779 aa21.89■■□□□ 1.09
TVP23A-209ENST00000575135 ZNF428Q96B54 188 aa21.89■■□□□ 1.09
TVP23A-209ENST00000575135 ZNRF3Q9ULT6 936 aa21.89■■□□□ 1.09
TVP23A-209ENST00000575135 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.09
TVP23A-209ENST00000575135 WDR33Q9C0J8 1336 aaKnown RBP21.88■■□□□ 1.09
TVP23A-209ENST00000575135 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
TVP23A-209ENST00000575135 DDX46Q7L014 1031 aaKnown RBP21.88■■□□□ 1.09
TVP23A-209ENST00000575135 MPNDQ8N594 471 aa21.88■■□□□ 1.09
TVP23A-209ENST00000575135 GPRC5DQ9NZD1 345 aa21.88■■□□□ 1.09
TVP23A-209ENST00000575135 TRIM35Q9UPQ4 493 aa21.88■■□□□ 1.09
TVP23A-209ENST00000575135 SH3TC1Q8TE82 1336 aa21.87■■□□□ 1.09
TVP23A-209ENST00000575135 MYBBP1AQ9BQG0 1328 aaKnown RBP21.87■■□□□ 1.09
TVP23A-209ENST00000575135 CHPF2Q9P2E5 772 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms